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Transform User's Guide and Reference Manual PDF

436 Pages·1999·2.92 MB·English
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Transform User’s Guide and Reference Manual Transform Version 3.4 May, 1999 Edition Copyright ©1990-1999 Fortner Software LLC and its Licensors. All Rights Reserved. Restricted Rights Notice ® The IDL software program and the accompanying procedures, functions, and doc- umentation described herein are sold under license agreement. Their use, duplica- tion, and disclosure are subject to the restrictions stated in the license agreement. Research Systems, Inc. reserves the right to make changes to this document at any time and without notice. Limitation of Warranty Research Systems, Inc. makes no warranties, either express or implied, as to any matter not expressly set forth in the license agreement, including without limitation the condition of the software, merchantability, or fitness for any particular purpose. Research Systems, Inc. shall not be liable for any direct, consequential, or other damages suffered by the Licensee or any others resulting from use of the IDL soft- ware package or its documentation. Permission to Reproduce this Manual If you are a licensed user of this product, Research Systems, Inc. grants you a lim- ited, nontransferable license to reproduce this particular document provided such copies are for your use only and are not sold or distributed to third parties. All such copies must contain the title page and this notice page in their entirety. Acknowledgments Fortner Software and its logo are trademarks of Fortner Software LLC Transform, Noesys, Plot,T3D and the HDF Browser are trademarks of Fortner Software LLC Portions of the import code are Copyright © 1991 Silicon Graphics, Inc. Permis- sion to use, copy, modify, distribute, and sell this software and its documentation for any purpose is hereby granted without fee, provided that (i) the above copyright notices and this permission notice appear in all copies of the software and related documentation, and (ii) the name of Silicon Graphics may not be used in any adver- tising or publicity relating to the software without the specific, prior written permis- sion of Silicon Graphics. Research Systems, Inc. documentation is printed on recycled paper. Our paper has a minimum 20% post-consumer waste content and meets all EPA guidelines. THE SOFTWARE IS PROVIDED “AS-IS” AND WITHOUT WARRANTY OF ANY KIND, EXPRESS, IMPLIED OR OTHERWISE, INCLUDING WITHOUT LIMITATION, ANY WAR- RANTY OF MERCHANTABILITY OR FITNESS FOR A PARTICULAR PURPOSE. IN NO EVENT SHALL SILICON GRAPHICS BE LIABLE FOR ANY SPECIAL, INCIDEN- TAL, INDIRECT OR CONSEQUENTIAL DAMAGES OF ANY KIND, OR ANY DAMAGES WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR PROFITS, WHETHER OR NOT ADVISED OF THE POSSIBILITY OF DAMAGE, AND ON ANY THEORY OF LIABIL- ITY, ARISING OUT OF OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS SOFTWARE. Copyright Notice and Statement for NCSA Hierarchical Data Format (HDF) Soft- ware Library and Utilities. Copyright 1988-1998 The Board of Trustees of the Uni- versity of Illinois. All rights reserved. Contributors: National Center for Supercomputing Applications (NCSA) at the Univer- sity of Illinois, Fortner Software, Unidata Program Center (netCDF), The Independent JPEG Group (JPEG), Jean-loup Gailly and Mark Adler (gzip), and Digital Equipment Corporation (DEC). Redistribution and use in source and binary forms, with or without modification, are permitted for any purpose (including commercial purposes) provided that the following conditions are met: • Redistributions of source code must retain the above copyright notice, this list of conditions, and the following disclaimer. • Redistributions in binary form must reproduce the above copyright notice, this list of conditions, and the following disclaimer in the documentation and/or materials provided with the distribution. • In addition, redistributions of modified forms of the source or binary code must carry prominent notices stating that the original code was changed and the date of the change. • All publications or advertising materials mentioning features or use of this software must acknowledge that it was developed by the National Center for Supercomput- ing Applications at the University of Illinois, and credit the Contributors. • Neither the name of the University nor the names of the Contributors may be used to endorse or promote products derived from this software without specific prior written permission from the University or the Contributors. DISCLAIMER: THIS SOFTWARE IS PROVIDED BY THE UNIVERSITY AND THE CONTRIBUTORS "AS IS" WITH NO WARRANTY OF ANY KIND, EITHER EXPRESSED OR IMPLIED. In no event shall the University or the Contributors be lia- ble for any damages suffered by the users arising out of the use of this software, even if advised of the possibility of such damage. Other trademarks and registered trademarks are the property of the respective trademark holders. Contents Part I: Introduction Chapter 1: Welcome ....................................................................................... 21 Transform Lets You... .......................................................................................... 23 Getting Started with Transform ........................................................................... 24 Installing Transform ....................................................................................... 24 Upgrading Transform ..................................................................................... 24 About this Manual ................................................................................................ 26 Chapter 2: Using Transform........................................................................... 27 Sample Data ......................................................................................................... 28 Understanding Window Organization ................................................................. 31 Noesys User’s Guide and Reference Manual 5 6 Part II: Tours Chapter 3: Viewing Your Data ........................................................................ 37 Opening a Dataset ................................................................................................ 38 The Dataset Window ...................................................................................... 38 Generating Images ............................................................................................... 40 Interactive Selection ....................................................................................... 40 Image Tools ................................................................................................... 41 Generating Interpolated Images ..................................................................... 43 Manipulating Color ........................................................................................ 44 Choosing a Data Range ........................................................................................ 46 Create a Histogram (Windows) ..................................................................... 47 Change the Data Min/Max (Power Macintosh) ............................................. 49 Edit Outlier Colors (Windows) ...................................................................... 50 Change the Data Value ........................................................................................ 52 Managing Multiple Windows .............................................................................. 53 Chapter 4: The Notebook and Calculations.................................................. 55 Text in the Notebook ........................................................................................... 56 Calculations in the Notebook ............................................................................... 57 Example 1 - Difference Calculation .............................................................. 57 Example 2 - Deviation Calculation ................................................................ 58 Example 3 - Wave Function (Windows only) ............................................... 59 Chapter 5: Line Graphs................................................................................... 61 Generating Line Graphs ....................................................................................... 62 Horizontal and Vertical Line Graphs ............................................................. 62 Synchronizing Windows ................................................................................ 63 Comparing Line Graphs ................................................................................. 63 Contents Noesys User’s Guide and Reference Manual 7 Chapter 6: Contour and Vector Plots ............................................................ 65 Contour Plots ....................................................................................................... 66 How to Make Contour Plots in Transform for Windows .............................. 66 Contour Levels/Contours Dialog ................................................................... 67 Contour Label Tool ........................................................................................ 68 Making an Overlay .............................................................................................. 69 Vector Plots .......................................................................................................... 70 Combining Plots (Windows) ......................................................................... 70 Combining Plots (Power Macintosh) ............................................................. 71 Chapter 7: Surface Plots and Image Macros................................................ 73 Create a Surface Plot ............................................................................................ 74 Image Angle, Position and Size ..................................................................... 74 Surface Parameters and Types (Windows) .......................................................... 77 Surface Types ................................................................................................. 77 Axis Tool ....................................................................................................... 78 Surface Decorations ....................................................................................... 78 Surface Parameters and Types (Macintosh) ........................................................ 80 Create an Image Macro ........................................................................................ 82 Change Scales ................................................................................................ 83 Change Data Axis Title .................................................................................. 84 Change the Plot Title ..................................................................................... 84 Chapter 8: Column Data ................................................................................. 85 Importing Column Data ....................................................................................... 86 Specifying the Columns and the Target Matrix ............................................. 87 Modifying the Aspect Ratio ................................................................................. 92 Modifying the Data Minimum and Maximum ..................................................... 94 Filling Missing Data Values ................................................................................ 97 Noesys User’s Guide and Reference Manual Contents 8 Part III: Reference Manual Chapter 9: Importing Files............................................................................ 103 Opening the Data File ........................................................................................ 104 Automatic Import File Types ....................................................................... 104 Import Files with Multiple Records or Objects ........................................... 108 Importing Slices from 3D Arrays ................................................................ 108 Importing Files that Require Additional Information .................................. 109 Select the Import File Type ................................................................................ 113 Importing Text Matrix Files ......................................................................... 113 Importing Binary Matrix Files ..................................................................... 115 Importing Text Column Files ...................................................................... 116 Importing Binary Column Files ................................................................... 119 Selecting Columns ....................................................................................... 120 View File ............................................................................................................ 123 Chapter 10: Data Windows ............................................................................. 125 Data in Transform .............................................................................................. 126 Open/Create New Datasets and Attributes ........................................................ 127 Open... Command ........................................................................................ 127 New... Command ......................................................................................... 127 Attributes... Command ................................................................................. 128 Format Specifications .................................................................................. 129 Tools in the Dataset Window (Windows only) .................................................. 131 Select Tool ................................................................................................... 131 MinMax Tool ............................................................................................... 131 The Notebook Window ...................................................................................... 133 Contents Noesys User’s Guide and Reference Manual 9 Chapter 11: Data Manipulation ...................................................................... 135 Data Manipulation Methods .............................................................................. 136 Extract Selection .......................................................................................... 136 Change Data Entry ....................................................................................... 136 Generate Scales ............................................................................................ 137 Smooth Data ................................................................................................. 138 Resample Data ............................................................................................. 138 Fill Missing Data ............................................................................................... 141 Matrix Fill Methods ..................................................................................... 141 Missing Data ................................................................................................ 143 Weighted Fill Parameters ................................................................................... 144 Kriging ............................................................................................................... 146 Kriging Parameters ...................................................................................... 146 Chapter 12: Image Windows.......................................................................... 151 Create Images and Plots ..................................................................................... 152 The Tool Palette ................................................................................................. 153 The Select Tool .................................................................................................. 154 The MinMax Tool .............................................................................................. 155 Fiddle Tool ......................................................................................................... 157 Resize Tool ........................................................................................................ 159 Overlay Tool ...................................................................................................... 161 Creating Overlays ........................................................................................ 162 Axis Tool ........................................................................................................... 164 Axis Labels Dialog ...................................................................................... 165 Chapter 13: Color and Color Tables.............................................................. 169 Visual Data Analysis .......................................................................................... 170 Color Scaling Equation ...................................................................................... 171 Noesys User’s Guide and Reference Manual Contents 10 Modify the Data-Image Correspondence ........................................................... 172 Change Data MinMax .................................................................................. 172 Transform Data ............................................................................................ 172 Choose Different Color Table ...................................................................... 172 Edit Outlier Colors (Windows) .................................................................... 172 Color Tables Menu ............................................................................................ 174 Custom Color Tables... Command (Windows) .................................................. 176 Import... ........................................................................................................ 177 Export... ........................................................................................................ 177 HDF Color Tables ........................................................................................ 177 Binary Color Tables ..................................................................................... 177 Load Color Table... Command (Macintosh) ...................................................... 178 HDF Color Tables ........................................................................................ 178 KLUTZ Color Tables ................................................................................... 178 Binary Color Tables ..................................................................................... 178 Macintosh System Color Table .................................................................... 178 Color in Images and Plots .................................................................................. 179 Color in Surface Plots .................................................................................. 179 Color in Contour Plots ................................................................................. 179 Color Bar Window (Macintosh Only) ............................................................... 180 Color Information Dialog ............................................................................ 181 View Utility (Power Macintosh only) ................................................................ 186 Chapter 14: Raster Images ............................................................................. 187 Types of Raster Images ...................................................................................... 188 Simple Image ............................................................................................... 188 Interpolated Image ....................................................................................... 189 Polar Image (Power Macintosh only) .......................................................... 190 Contents Noesys User’s Guide and Reference Manual

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