The Zebrafish Genetics, Genomics, and Transcriptomics

569 Pages·2016·20.705 MB·English

by  H. William Detrich, Monte Westerfield and Leonard I. Zon (Eds.)

Methods in Cell
Biology
The Zebrafish: Genetics,
Genomics, and Transcriptomics
Volume 135
Series Editors
Leslie Wilson
DepartmentofMolecular,CellularandDevelopmentalBiology
UniversityofCalifornia
SantaBarbara,California
Phong Tran
University of Pennsylvania
Philadelphia, USA &
Institut Curie, Paris, France
Methods in Cell
Biology
The Zebrafish: Genetics,
Genomics, and Transcriptomics
Volume 135
Edited by
H. William Detrich, III
Northeastern University Marine Science Center,
Nahant,MA,United States
Monte Westerfield
University of Oregon, Eugene,OR,United States
Leonard I. Zon
Harvard University, Boston,MA,United States
AMSTERDAM(cid:129)BOSTON(cid:129)HEIDELBERG(cid:129)LONDON
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SANFRANCISCO(cid:129)SINGAPORE(cid:129)SYDNEY(cid:129)TOKYO
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Len,Monte,andIdedicatethe4thEditionofMethodsinCellBiology:
The Zebrafish to the postdoctoral fellows and graduate students
who conducted the genetic screens that established the zebrafish as a
preeminent vertebrate model system for analysis of development.
Contributors
J. Ablain
Howard Hughes Medical Institute and Harvard Medical School, Boston, MA,
United States
K. Asakawa
SOKENDAI (TheGraduateUniversity forAdvanced Studies),Mishima,
Shizuoka,Japan
H. Ata
Mayo Clinic, Rochester,MN, UnitedStates
J. Bakkers
HubrechtInstituteand University Medical Centre Utrecht, Utrecht,The
Netherlands
J. Bessa
IBMC-InstitutodeBiologiaMoleculareCelular,Porto,Portugal;Universidadedo
Porto,Porto, Portugal
Y.M. Bradford
University ofOregon, Eugene,OR, UnitedStates
B.R. Cairns
University ofUtah School ofMedicine,SaltLake City, UT,United States
W.Chen
VanderbiltUniversity School ofMedicine, Nashville, TN, UnitedStates
J. Cibelli
Michigan State University,East Lansing, MI,United States; BIONAND,
Andalucı´a,Spain
K.J. Clark
Mayo Clinic, Rochester,MN, UnitedStates
P. Coucke
Ghent University,Ghent,Belgium
V.T.Cunliffe
University ofSheffield, Sheffield, United Kingdom
F.DelBene
PSL ResearchUniversity,Paris, France
xvii
xviii Contributors
A.De Paepe
Ghent University,Ghent, Belgium
F. DeSantis
PSL Research University,Paris, France
V.Di Donato
PSL Research University,Paris, France
A.Eagle
University ofOregon,Eugene,OR, United States
S.C. Ekker
Mayo Clinic,Rochester, MN, United States
T.Erickson
Oregon Health& Science University,Portland, OR, United States
T.Evans
WeillCornellMedical College, New York, NY,UnitedStates
D.Fashena
University ofOregon,Eugene,OR, United States
A.Felker
University ofZu¨rich,Zu¨rich, Switzerland
A.Ferna´ndez-Min˜a´n
Centro Andaluz de Biologı´a delDesarrollo (CABD), ConsejoSuperior de
Investigaciones Cientı´ficas/Universidad Pablo de Olavide/Junta de Andaluc´ıa,
Sevilla, Spain
K.Frazer
University ofOregon,Eugene,OR, United States
A.Ghosha
Carnegie Institution for Science,Baltimore, MD, United States
M.G. Goll
MemorialSloan Kettering Cancer Center,New York, NY,United States
J.L. Go´mez-Skarmeta
Centro Andaluz de Biologı´a delDesarrollo (CABD), ConsejoSuperior de
Investigaciones Cientı´ficas/Universidad Pablo de Olavide/Junta de Andaluc´ıa,
Sevilla, Spain
aCurrentaddress:TataInstituteofFundamentalResearch,Mumbai,India
Contributors xix
D.J. Grunwald
University ofUtah, SaltLake City, UT,United States
M.E. Halpern
Carnegie Institution for Science,Baltimore, MD, UnitedStates
J.K. Heath
Walterand Eliza Hall InstituteofMedical Research,Parkville, VIC, Australia
K. Hoshijima
University ofUtah, SaltLake City, UT,United States
D.G. Howe
University ofOregon, Eugene,OR, UnitedStates
H. Huang
University ofCalifornia LosAngeles, LosAngeles, CA, United States
J.P.Junker
HubrechtInstituteand University Medical Centre Utrecht, Utrecht,The
Netherlands
M.J. Jurynec
University ofUtah, SaltLake City, UT,United States
P. Kalita
University ofOregon, Eugene,OR, UnitedStates
K. Kawakami
SOKENDAI(TheGraduateUniversityforAdvancedStudies),Mishima,Shizuoka,
Japan
M.C. Keightley
Australian Regenerative Medicine Institute,Clayton, VIC, Australia; Monash
University,Clayton,VIC, Australia
F.Kruse
HubrechtInstituteand University Medical Centre Utrecht, Utrecht,
The Netherlands
C. Lawrence
Boston Children’s Hospital, Boston, MA, UnitedStates
S. Lefever
Ghent University,Ghent,Belgium
C. Li
Memorial Sloan KetteringCancerCenter,New York, NY,UnitedStates; Weill
CornellGraduateSchool ofMedical Sciences, New York, NY,United States
xx Contributors
G.J.Lieschke
Australian RegenerativeMedicine Institute,Clayton,VIC, Australia; Monash
University,Clayton, VIC, Australia
S.Lin
University ofCalifornia Los Angeles,Los Angeles,CA, United States
C.G. Love
Walterand ElizaHall Institute ofMedical Research, Parkville,VIC, Australia;
University ofMelbourne, Parkville, VIC, Australia
L.A. Maddison
Vanderbilt University School ofMedicine, Nashville,TN, United States
P.Mani
University ofOregon,Eugene,OR, United States
S.Markmiller
University ofCalifornia San Diego, La Jolla, CA,UnitedStates
R.Martin
University ofOregon,Eugene,OR, United States
S.Masuda
Tokyo Institute ofTechnology,Yokohama,Japan
A.C. Miller
University ofOregon,Eugene,OR, United States
C.B. Moens
Fred Hutchinson Cancer Research Center, Seattle,WA,United States
C.Mosimann
University ofZu¨rich,Zu¨rich, Switzerland
S.T.Moxon
University ofOregon,Eugene,OR, United States
M.C. Mullins
University ofPennsylvania Perelman School ofMedicine,Philadelphia,PA,
United States
P.J.Murphy
University ofUtah School ofMedicine, Salt Lake City,UT,
United States
K.N. Murray
University ofOregon,Eugene,OR, United States
Contributors xxi
A. Muto
SOKENDAI (TheGraduateUniversity forAdvanced Studies),Mishima,
Shizuoka,Japan
T. Nicolson
Oregon Health & Science University, Portland, OR, UnitedStates
C.J. Ott
Dana Farber CancerInstitute,Harvard Stem Cell Institute,Boston, MA,
United States
H. Paddock
University ofOregon, Eugene,OR, UnitedStates
F.Pelegri
University ofWisconsineMadison, Madison, WI,United States
C. Pich
University ofOregon, Eugene,OR, UnitedStates
S. Prukudom
Kasetsart University, Bangkok, Thailand;Center ofExcellence on Agricultural
Biotechnology: (AG-BIO/PERDO-CHE), Bangkok, Thailand
S. Ramachandran
University ofOregon, Eugene,OR, UnitedStates
J.E.J.Rasko
Centenary Institute,Camperdown, NSW, Australia; University ofSydney,
Sydney,NSW,Australia; Royal Prince Alfred Hospital, Newtown,NSW,
Australia
M.P. Rossmann
Harvard University,Harvard,Cambridge, MA, UnitedStates
L. Ruzicka
University ofOregon, Eugene,OR, UnitedStates
K. Schaper
University ofOregon, Eugene,OR, UnitedStates
A.N. Shah
Fred Hutchinson CancerResearch Center,Seattle,WA,UnitedStates
X. Shao
University ofOregon, Eugene,OR, UnitedStates
A. Singer
University ofOregon, Eugene,OR, UnitedStates