Parallel Computational Fluid Dynamics 2008: Parallel Numerical Methods, Software Development and Applications PDF
Preview Parallel Computational Fluid Dynamics 2008: Parallel Numerical Methods, Software Development and Applications
Lecture Notes in Computational Science 74 and Engineering Editors TimothyJ.Barth MichaelGriebel DavidE.Keyes RistoM.Nieminen DirkRoose TamarSchlick For further volumes: http://www.springer.com/series/3527 • Damien Tromeur-Dervout G unther Brenner ● David R. Emerson Jocelyne Erhel ● Editors Parallel Computational Fluid Dynamics 2008 Parallel Numerical Methods, Software Development and Applications 123 Editors Damien Tromeur-Dervout David R. Emerson Université Lyon 1 - CNRS Science and Technology Facilities Council Institut Camille Jordan Daresbury Laboratory Bd du 11 Novembre 1918 43 Daresbury Science and Innovation Campus 69622 Villeurbanne WA4 4AD Warrington Cheshire France United Kingdom [email protected] [email protected] Gunther Brenner Jocelyne Erhel TU Clausthal INRIA - SAGE Institut für Technische Mechanik Campus de Beaulieu Adolph-Roemer-Str. 2A 35042 Rennes 38678 Clausthal-Zellerfeld France Germany [email protected] [email protected] ISSN 1439-7358 ISBN 978-3-642-14437-0 e-ISBN 978-3-642-14438-7 DOI: 10.1007/978-3-642-14438-7 Springer Heidelberg Dordrecht London New York Library of Congress Control Number: 2010935447 Mathematics Subject Classification Numbers (2010): 65F10, 65N06, 65N08, 65N22, 65N30, 65N55, 65Y05, 65Y10, 65Y20, 15-06, 35-06, 76-XX 76-06 © Springer-Verlag Berlin Heidelberg 2010 Thisworkissubjecttocopyright.Allrightsarereserved,whetherthewholeorpartofthematerialis concerned,specifically therightsoftranslation,reprinting,reuseofillustrations,recitation,broadcasting, reproductiononmicrofilmorinanyotherway,andstorageindatabanks.Duplicationofthispublication orpartsthereofispermittedonlyundertheprovisionsoftheGermanCopyrightLawofSeptember9, 1965,initscurrentversion,andpermissionforusemustalwaysbeobtainedfromSpringer.Violationsare liabletoprosecutionundertheGermanCopyrightLaw. Theuseofgeneraldescriptivenames,registerednames,trademarks,etc.inthispublicationdoesnotimply, evenintheabsenceofaspecificstatement,thatsuchnamesareexemptfromtherelevantprotectivelaws andregulationsandthereforefreeforgeneraluse. Cover design: deblik, Berlin Printed on acid-free paper Springer is part of Springer Science + Business Media (www.springer.com) Preface Parallel CFD 2008, the twentieth in the high-levelinternationalseries of meetings featuringdifferentaspectofparallelcomputingincomputationalfluiddynamicsand othermodernscientificdomainswasheldMay19−22,2008inLyon,France. The themesof the 2008meetingincludedthe traditionalemphasesof thiscon- ference,andexperienceswithcontemporaryarchitectures.Around70presentations wereincludedintotheconferenceprograminthefollowingsessions: ParallelAlgorithmsandsolvers Parallelperformanceswithcontemporaryarchitectures Structuredandunstructuredgridmethods,boundarymethods softwareframeworkandcomponentsarchitecture CFDapplications(Biofluid,environmentalproblem)LatticeBoltzmannmethodand SPH OptimisationinAerodynamics Thisbookpresentsanup-to-dateoverviewofthestateoftheartinParallelCom- putational Fluid Dynamics from Asia, Europe, and North America. This reviewed proceedingsincludedaboutsixtypercentoftheorallecturespresentedattheconfer- ence. Theeditors. VI Preface ParallelCFD 2008wasorganizedbythe InstitutCamille Jordanof the Univer- sity ofLyon1 incollaborationwith theCenter forthe DevelopmentoftheParallel ScientificComputing. The Scientific Committee and Local Organizers of Parallel CFD 2008 are de- lighted to acknowledge the generous sponsorship of the following organizations, through financial or in-kind assistance. Assistance of our sponsors allowed to or- ganizescientificaswellassocialprogramoftheconference. ScientificComittee Intel,Germany SGI,France UniversityLyon1 InstitutCamilleJordan Re´gionRhoˆne-Alpes UniversityLyon1 CenterforDevelopmentof Fluorem Modelys UniversityLyon1 Manypeopleworkedtoorganizeandexecutetheconference.Weareespecially grateful to all members of the international scientific committee. We also want to thankthekeymembersofthelocalorganizingcommitteeDavidGuibert,ToanPham Duc,Patricelinel,SimonPomarede,ThomasDufaud,NicolasKielbasievich,Daniel Fogliani,FabienneOudin,BrigitteHautier,SandrineMontingy. We also thank our colleagues Fre´de´ric Desprez from the Laboratoire d’Informatique du Paralle´lisme (LIP) Ecole Normale Supe´rieure de Lyon, Michel Lance from the Laboratoire de Me´canique des Fluides et d’Accoustique (LMFA) EcoleCentraledeLyon,andPatrickQue´re´ fromtheComputerScienceLaboratory formechanicsandEngineeringSciences(LIMSI)fortheirhelptopromotethisevent. DamienTromeur-Dervout Chairman,ParallelCFD2008. Contents PartI Invitedspeakers LargeScaleComputationsinNuclearEngineering:CFDforMultiphase FlowsandDNSforTurbulentFlowswith/withoutMagneticField TomoakiKunugi,Shin-ichiSatake,YasuoOse,HiroyukiYoshida,Kazuyuki Takase .......................................................... 3 ScalablealgebraicmultilevelpreconditionerswithapplicationtoCFD AndreaAprovitola,PasquaD’Ambra,FilippoDenaro,DanieladiSerafino, SalvatoreFilippone................................................ 15 Accelerationofiterativesolutionofseriesofsystemsduetobetterinitial guess DamienTromeur-Dervout,YuriVassilevski ............................. 29 PartII OptimisationinAerodynamicsDesign AerodynamicStudyofVerticalAxisWindTurbines MerimMukinovic´,GuntherBrenner,ArdavanRahimi .................... 43 ParallelShapeOptimizationofaMissileonaGridInfrastructure ErdalOktay,OsmanMerttopcuoglu,CevatSener,AhmetKetenci,HasanU. Akay ........................................................... 51 Analysis of Aerodynamic Indices for Racing Sailing Yachts: a ComputationalStudyandBenchmarkonupto128CPUs. IgnazioMariaViola,RaffaelePonzini,DanieleRocchi,FabioFossati ........ 61 Parallelimplementationoffictitioussurfacesmethodforaerodynamic shapeoptimization S.Peigin,B.Epstein,S.Gali......................................... 71 VIII Contents PathOptimizationofDualAirfoilsFlappinginaBiplaneConfiguration withRSMinaParallelComputingEnvironment MustafaKaya,IsmailH.Tuncer...................................... 83 PartIII Gridmethods ConvergenceImprovementMethodforComputationalFluidDynamics UsingBuilding-CubeMethod TakahiroFukushigeToshihiroKamatsuchiToshiyukiArimaandSeijiFujino... 93 AerodynamicAnalysisofRotorBladesusingOversetGridwithParallel Computation Dong-KyunIm,Seong-YongWie,EugeneKim,Jang-HyukKwon,Duck-Joo Lee,andKi-HoonChung,andSeung-BumKim..........................101 Largescalemassivelyparallelcomputationswiththeblock-structured elsACFDsoftware M.Gazaix,S.Mazet,M.Montagnac ..................................111 Applications on Hybrid Unstructured Moving Grid Method for Three-DimensionalCompressibleFlows HiroyaAsakawa MasashiYamakawaandKenichiMatsuno................119 ProgressiveDevelopmentofMoving-GridFinite-VolumeMethodfor Three-DimensionalIncompressibleFlows ShinichiASAO, SadanoriISHIHARA, Kenichi MATSUNO, Masashi YAMAKAWA .....................................................127 PartIV Boundarymethods FlowComputationsUsingEmbeddedBoundaryConditionsonBlock StructuredCartesianGrid T.Kamatsuch,T.Fukushige,K.Nakahashi .............................137 ComputationofTwo-phaseFlowinFlip-chipPackagingUsingLevelSet Method TomohisaHashimoto,KeiichiSaito,KojiMorinishi,,NobuyukiSatofuka......145 AParallelImmersedBoundaryMethodforBlood-likeSuspensionFlow Simulations F.Pacull,M.Garbey...............................................153 Contents IX PartV HighOrdermethods 3DSpectralParallelMulti-Domaincomputingfornaturalconvection flows S.Xin,J.Chergui,P.LeQue´re´ ......................................163 3DtimeaccurateCFDsimulationsofacentrifugalcompressor AndreasLucius,GuntherBrenner ....................................173 PartVI ParallelAlgorithmsandSolvers Multicolor SOR Method with Consecutive Memory Access Implementation in a Shared and Distributed Memory Parallel Environment KenjiOno,YasuhiroKawashima .....................................183 ProperOrthogonalDecompositionInDecoupling LargeDynamical Systems ToanPham,DamienTromeur-Dervout.................................193 PerformanceAnalysisoftheParallelAitken-AdditiveSchwarzWaveform RelaxationMethodonDistributedEnvironment HatemLtaief,MarcGarbey .........................................203 Aitken-SchwarzAccelerationnotbasedonthemeshforCFD D.Tromeur-Dervout ...............................................211 Fromextruded-2Dtofully-3DgeometriesforDNS:aMultigrid-based extensionofthePoissonsolver A.Gorobets,F.X.Trias,M.Soria,C.D.Pe´rez-Segarra,A.Oliva ...........219 ParalleldirectPoissonsolverforDNSofcomplexturbulentflowsusing UnstructuredMeshes R.Borrell,O.Lehmkuhl,F.X.Trias,M.Soria,A.Oliva ......................227 A numerical scheme for the computation of phase transition in compressiblemultiphaseflows VincentPerrier ...................................................235 PartVII LatticeBoltzmanandSPHMethods LatticeBoltzmannSimulationsofSlipFlowofNon-NewtonianFluidsin Microchannels RameshK.AgarwalandLeeChusak..................................247 Multiple RelaxationTime Lattice Boltzmannsimulation of binary dropletcollisions ErnestoMonaco,KaiH.Luo,GuntherBrenner..........................257 X Contents High-PerformanceComputingandSmoothedParticleHydrodynamics C.Moulinec,R.Issa,D.Latino,P.Vezolle,D.R.EmersonandX.J.Gu........265 PartVIII softwareFrameworkandComponentArchitecture Anintegratedobject-orientedapproachforparallelCFD DominiqueEyheramendy,DavidLoureiro,FabienneOudin-Dardun..........275 FastMultipoleMethodforparticleinteractions:anopensourceparallel librarycomponent F.A.Cruz,M.G.Knepley,L.A.Barba ................................285 HybridMPI-OpenMPperformanceinmassivelyparallelcomputational fluiddynamics G.Houzeaux,M.Va´zquez,X.Sa´ezandJ.M.Cela ........................293 Hierarchical adaptive multi-mesh partitioning algorithm on heterogeneoussystems Y.Mesri,H.Digonnet,T.Coupez.....................................299 PartIX ParallelPerformance TowardsPetascaleComputingwithParallelCFDcodes A.G.Sunderland,M.Ashworth,C.Moulinec,N.Li,J.Uribe,Y.Fournier.....309 ScalabilityConsiderationsofaParallelFlowSolveronLargeComputing Systems ErdalYilmaz,ResatU.Payli,HassanU.Akay,AkinEcer,andJingxinLiu.....321 LargeScaledComputationofIncompressibleFlowsonCartesianMesh UsingaVector-ParallelSupercomputer ShunTakahashi,TakashiIshida,KazuhiroNakahashi,HiroakiKobayashi, KokiOkabe,YouichiShimomura,TakashiSoga,AkihikoMusa .............331 DynamicLoadBalancingonNetworkedMulti-coreComputers StanleyChien,GunMakinabakan,AkinEcer,andHasanAkay .............339 OnefficiencyofsupercomputersinCFDsimulations AndreyV.Gorobets,TatianaK.Kozubskaya,SergeyA.Soukov..............347 PartX Environmentandbiofluidsapplications NumericalStudyofPulsatileFlowThroughModelsofVascularStenoses withPhysiologicalWaveformoftheHeart JasonD.Thompson,ChristianF.PinznandRameshK.Agarwal ............357
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