HandbookofDataVisualization Chun-houh Chen Wolfgang Härdle Antony Unwin Editors Handbook of Data Visualization WithFiguresandTables 123 Editors Dr.Chun-houhChen ProfessorWolfgangHärdle InstituteofStatisticalScience CASE–CenterforAppliedStatistics AcademiaSinica andEconomics AcademiaRoad,Section SchoolofBusinessandEconomics Taipei Humboldt-UniversitätzuBerlin Taiwan SpandauerStraße [email protected] Berlin Germany [email protected] ProfessorAntonyUnwin MathematicsInstitute UniversityofAugsburg Augsburg Germany [email protected] ISBN ---- e-ISBN ---- DOI ./---- LibraryofCongressControlNumber: ©Springer-VerlagBerlinHeidelberg hisworkissubjecttocopyright.Allrightsarereserved,whetherthewholeorpartofthematerialis concerned,specificallytherightsoftranslation,reprinting,reuseofillustrations,recitation,broadcasting, reproductiononmicrofilmorinanyotherway,andstorageindatabanks.Duplicationofthispublication orpartsthereofispermittedonlyundertheprovisionsoftheGermanCopyrightLawofSeptember, ,initscurrentversion,andpermissionforusemustalwaysbeobtainedfromSpringer.Violationsare liableforprosecutionundertheGermanCopyrightLaw. heuseofgeneraldescriptivenames,registerednames,trademarks,etc.inthispublicationdoesnotimply, evenintheabsenceofaspecificstatement,thatsuchnamesareexemptfromtherelevantprotectivelaws andregulationsandthereforefreeforgeneraluse. TypesettingandProduction:LE-TEXJelonek,Schmidt&VöcklerGbR,Leipzig,Germany Cover:deblik,Berlin,Germany Printedonacid-freepaper springer.com Table of Contents I.DataVisualization I.1Introduction AntonyUnwin,Chun-houhChen,WolfgangK.Härdle..........................3 II.Principles II.1ABriefHistoryofDataVisualization MichaelFriendly..........................................................15 II.2GoodGraphics? AntonyUnwin............................................................57 II.3StaticGraphics PaulMurrell..............................................................79 II.4DataVisualizationThroughTheirGraphRepresentations GeorgeMichailidis.......................................................103 II.5Graph-theoreticGraphics LelandWilkinson........................................................121 II.6High-dimensionalDataVisualization Martinheus............................................................151 II.7MultivariateDataGlyphs:PrinciplesandPractice MatthewO.Ward........................................................179 II.8LinkedViewsforVisualExploration AdalbertWilhelm........................................................199 II.9LinkedDataViews GrahamWills...........................................................217 II.10VisualizingTreesandForests SimonUrbanek..........................................................243 VI TableofContents III.Methodologies III.1InteractiveLinkedMicromapPlotsfortheDisplay ofGeographicallyReferencedStatisticalData JürgenSymanzik,DanielB.Carr...........................................267 III.2GrandTours,ProjectionPursuitGuidedTours,andManualControls DianneCook,AndreasBuja,Eun-KyungLee,HadleyWickham................295 III.3MultidimensionalScaling MichaelA.A.Cox,TrevorF.Cox...........................................315 III.4HugeMultidimensionalDataVisualization:BacktotheVirtue ofPrincipalCoordinatesandDendrogramsintheNewComputerAge FrancescoPalumbo,DomenicoVistocco,AlainMorineau......................349 III.5MultivariateVisualizationbyDensityEstimation MichaelC.Minnotte,StephanR.Sain,DavidW.Scott........................389 III.6StructuredSetsofGraphs RichardM.Heiberger,BurtHolland........................................415 III.7RegressionbyParts: FittingVisuallyInterpretableModelswithGUIDE Wei-YinLoh ............................................................ 447 III.8StructuralAdaptiveSmoothing byPropagation–SeparationMethods JörgPolzehl,VladimirSpokoiny............................................471 III.9SmoothingTechniquesforVisualisation AdrianW.Bowman......................................................493 III.10DataVisualizationviaKernelMachines Yuan-chinIvanChang,Yuh-JyeLee,Hsing-KuoPao,Mei-HsienLee, Su-YunHuang...........................................................539 III.11VisualizingClusterAnalysisandFiniteMixtureModels FriedrichLeisch..........................................................561 III.12VisualizingContingencyTables DavidMeyer,AchimZeileis,KurtHornik...................................589 III.13MosaicPlotsandTheirVariants HeikeHofmann..........................................................617 III.14ParallelCoordinates:Visualization,Exploration andClassiicationofHigh-DimensionalData AlfredInselberg..........................................................643 III.15MatrixVisualization Han-MingWu,ShengLiTzeng,Chun-HouhChen............................681 III.16VisualizationinBayesianDataAnalysis JouniKerman,AndrewGelman,TianZheng,YuejingDing....................709 III.17ProgrammingStatisticalDataVisualizationintheJavaLanguage JunjiNakano,YoshikazuYamamoto,KeisukeHonda.........................725 III.18Web-BasedStatisticalGraphicsusingXMLTechnologies YoshiroYamamoto,MasayaIizuka,TomokazuFujino........................757 TableofContents VII IV.SelectedApplications IV.1VisualizationforGeneticNetworkReconstruction GraceS.Shieh,Chin-YuanGuo............................................793 IV.2Reconstruction,VisualizationandAnalysisofMedicalImages HenryHorng-ShingLu ................................................... 813 IV.3ExploratoryGraphicsofaFinancialDataset AntonyUnwin,Martinheus,WolfgangK.Härdle...........................831 IV.4GraphicalDataRepresentationinBankruptcyAnalysis WolfgangK.Härdle,RouslanA.Moro,DorotheaSchäfer......................853 IV.5VisualizingFunctionalDatawithanApplication toeBay’sOnlineAuctions WolfgangJank,GalitShmueli,CatherinePlaisant,BenShneiderman...........873 IV.6VisualizationToolsforInsuranceRiskProcesses KrzysztofBurnecki,RafałWeron...........................................899 List of Contributors AdrianW.Bowman Chun-houhChen UniversityofGlasgow AcademiaSinica DepartmentofStatistics InstituteofStatisticalScience UK Taiwan [email protected] [email protected] AndreasBuja DianneCook UniversityofPennsylvania IowaStateUniversity StatisticsDepartment DepartmentofStatistics USA USA [email protected] [email protected] KrzysztofBurnecki MichaelA.A.Cox WroclawUniversityofTechnology UniversityofNewcastleUponTyne InstituteofMathematics DivisionofPsychology andComputerScience SchoolofBiologyandPsychology Poland UK [email protected] [email protected] DanielB.Carr TrevorF.Cox GeorgeMasonUniversity DataSciencesUnit CenterforComputationalStatistics UnileverR&DPortSunlight USA UK [email protected] [email protected] Yuan-chinIvanChang YuejingDing AcademiaSinica ColumbiaUniversity InstituteofStatisticalScience DepartmentofStatistics Taiwan USA [email protected] [email protected] X ListofContributors MichaelFriendly BurtHolland YorkUniversity TempleUniversity PsychologyDepartment DepartmentofStatistics Canada USA [email protected] [email protected] KeisukeHonda TomokazuFujino GraduateUniversity FukuokaWomen’sUniversity forAdvancedStudies DepartmentofEnvironmentalScience Japan Japan [email protected] [email protected] KurtHornik AndrewGelman WirtschatsuniversitätWien ColumbiaUniversity DepartmentofStatistics DepartmentofStatistics andMathematics USA Austria [email protected] [email protected] Su-YunHuang Chin-YuanGuo AcademiaSinica AcademiaSinica InstituteofStatisticalScience InstituteofStatisticalScience Taiwan Taiwan [email protected] WolfgangK.Härdle MasayaIizuka Humboldt-UniversitätzuBerlin OkayamaUniversity CASE–CenterforAppliedStatistics GraduateSchoolofNaturalScience andEconomics andTechnology Germany Japan [email protected] [email protected] AlfredInselberg RichardM.Heiberger TelAvivUniversity TempleUniversity SchoolofMathematicalSciences DepartmentofStatistics Israel USA [email protected] [email protected] WolfgangJank HeikeHofmann UniversityofMaryland IowaStateUniversity DepartmentofDecision DepartmentofStatistics andInformationTechnologies USA USA [email protected] [email protected] ListofContributors XI JouniKerman DavidMeyer NovartisPharmaAG WirtschatsuniversitätWien USA DepartmentofInformationSystems [email protected] andOperations Austria [email protected] Eun-KyungLee SeoulNationalUniversity GeorgeMichailidis DepartmentofStatistics UniversityofMichigan Korea DepartmentofStatistics [email protected] USA [email protected] Yuh-JyeLee NationalTaiwanUniversity MichaelC.Minnotte ofScienceandTechnology UtahStateUniversity DepartmentofComputerScience DepartmentofMathematics andInformationEngineering andStatistics Taiwan USA [email protected] [email protected] Mei-HsienLee AlainMorineau NationalTaiwanUniversity LaRevueMODULAD InstituteofEpidemiology France Taiwan [email protected] RouslanA.Moro FriedrichLeisch Humboldt-UniversitätzuBerlin Ludwig-Maximilians-Universität InstitutfürStatistikundÖkonometrie InstitutfürStatistik Germany Germany [email protected] [email protected] PaulMurrell Wei-YinLoh UniversityofAuckland UniversityofWisconsin-Madison DepartmentofStatistics DepartmentofStatistics NewZealand USA [email protected] [email protected] JunjiNakano HenryHorng-ShingLu heInstituteofStatisticalMathematics NationalChiaoTungUniversity andtheGraduateUniversity InstituteofStatistics forAdvancedStudies Taiwan Japan [email protected] [email protected]