Fields Virology

2501 Pages·2001·31.72 MB·English

by  David M. Knipe

Fields - Virology (Two Volumes) 4th Edition (August 2001): by Bernard N. Fields (Editor), Peter M., MD Howley
(Editor), Diane E., Ph.D. Griffin (Editor), Robert A., Ph.D. Lamb (Editor), Malcolm A., MD Martin (Editor), Bernard
Roizman (Editor), Stephen E., MD Straus (Editor), David M., Ph.D. Knipe (Editor) By Lippincott Williams & Wilkins
Publishers
By OkDoKeY
Fields Virology
Contents
Editors
Contributing Authors
Preface
Part I. General Virology
Chapter 1. The Origins of Virology
Arnold J. Levine
Chapter 2. Principles of Virology
Richard C. Condit
Chapter 3. Principles of Virus Structure
Stephen C. Harrison
Chapter 4. Virus Entry and Uncoating
John A. T. Young
Chapter 5. Replication Strategies of RNA Viruses
L. Andrew Ball
Chapter 6. Replication Strategies of DNA Viruses
Daniel DiMaio and Donald M. Coen
Chapter 7. Virus–Host Cell Interactions
David M. Knipe, Charles E. Samuel, and Peter Palese
Chapter 8. Virus Assembly
Eric Hunter
Chapter 9. Pathogenesis of Viral Infections
Kenneth L. Tyler and Neal Nathanson
Chapter 10. Cell Transformation by Viruses
Joseph R. Nevins
Chapter 11. The Immune Response to Viruses
J. Lindsay Whitton and Michael B. A. Oldstone
Chapter 12. Interferons and Other Cytokines
Christine A. Biron and Ganes C. Sen
Chapter 13. Virus Evolution
Victor R. DeFilippis and Luis P. Villarreal
Chapter 14. Epidemiology
Neal Nathanson
Chapter 15. Antiviral Therapy
Clyde Crumpacker
Chapter 16. Immunization Against Viral Diseases
Brian R. Murphy and Robert M. Chanock
Chapter 17. Virus Vectors and Their Applications
Alexander Pfeifer and Inder M. Verma
Chapter 18. Diagnostic Virology
Gregory A. Storch
Chapter 19. Plant Viruses
Sondra G. Lazarowitz
Chapter 20. Insect Viruses
Paul D. Friesen and Lois K. Miller
Chapter 21. Viruses of Yeasts, Fungi, and Parasitic Microorganisms
Reed B. Wickner
Chapter 22. Bacteriophages
Allan M. Campbell
Part II. Specific Virus Families
Picornaviridae
Chapter 23. Picornaviridae: The Viruses and Their Replication
Vincent R. Racaniello
Chapter 24. Enteroviruses: Polioviruses, Coxsackieviruses, Echoviruses, and Newer Enteroviruses
Mark A. Pallansch and Raymond P. Roos
Chapter 25. Rhinoviruses
Robert B. Couch
Chapter 26. Hepatitis A Virus
F. Blaine Hollinger and Suzanne U. Emerson
Caliciviridae
Chapter 27. Human Caliciviruses
Kim Y. Green, Robert M. Chanock, and Albert Z. Kapikian
Astroviridae
Chapter 28. Astroviruses
Suzanne M. Matsui and Harry B. Greenberg
Togaviridae
Chapter 29. Togaviridae: The Viruses and Their Replication
Sondra Schlesinger and Milton J. Schlesinger
Chapter 30. Alphaviruses
Diane E. Griffin
Chapter 31. Rubella Virus
Janet Chantler, Jerry S. Wolinsky, and Aubrey Tingle
Flaviviridae
Chapter 32. Flaviviridae: The Viruses and Their Replication
Brett D. Lindenbach and Charles M. Rice
Chapter 33. Flaviviruses
Donald S. Burke and Thomas P. Monath
Chapter 34. Hepatitis C Viruses
Marian E. Major, Barbara Rehermann, and Stephen M. Feinstone
Coronaviridae
Chapter 35. Coronaviridae: The Viruses and Their Replication
Michael M. C. Lai and Kathryn V. Holmes
Chapter 36. Coronaviruses
Kathryn V. Holmes
Arteriviridae
Chapter 37. Arteriviruses
Eric J. Snijder and Janneke J. M. Meulenberg
Rhabdoviridae
Chapter 38. Rhabdoviridae: The Viruses and Their Replication
John K. Rose and Michael A. Whitt
Chapter 39. Rhabdoviruses
Carlos A. de Mattos, Cecilia C. de Mattos, and Charles E. Rupprecht
Filoviridae
Chapter 40. Filoviridae: Marburg and Ebola Viruses
Anthony Sanchez, Ali S. Khan, Sherif R. Zaki, Gary J. Nabel, Thomas G. Ksiazek, and Clarence J. Peters
Paramyxoviridae
Chapter 41. Paramyxoviridae: The Viruses and Their Replication
Robert A. Lamb and Daniel Kolakofsky
Chapter 42. Parainfluenza Viruses
Robert M. Chanock, Brian R. Murphy, and Peter L. Collins
Chapter 43. Mumps Virus
Kathryn M. Carbone and Jerry S. Wolinsky
Chapter 44. Measles Virus
Diane E. Griffin
Chapter 45. Respiratory Syncytial Virus
Peter L. Collins, Robert M. Chanock, and Brian R. Murphy
Orthomyxoviridae
Chapter 46. Orthomyxoviridae: The Viruses and Their Replication
Robert A. Lamb and Robert M. Krug
Chapter 47. Orthomyxoviruses
Peter F. Wright and Robert G. Webster
VOLUME 2
Bunyaviridae
Chapter 48. Bunyaviridae: The Viruses and Their Replication
Connie S. Schmaljohn and Jay W. Hooper
Chapter 49. Bunyaviruses
Stuart T. Nichol
Arenaviridae
Chapter 50. Arenaviridae: The Viruses and Their Replication
Michael J. Buchmeier, Michael D. Bowen, and Clarence J. Peters
Bornaviridae
Chapter 51. Bornaviridae
Juan Carlos de la Torre
Reoviridae
Chapter 52. Reoviruses and Their Replication
Max L. Nibert and Leslie A. Schiff
Chapter 53. Mammalian Reoviruses
Kenneth L. Tyler
Chapter 54. Rotaviruses and Their Replication
Mary K. Estes
Chapter 55. Rotaviruses
Albert Z. Kapikian, Yasutaka Hoshino, and Robert M. Chanock
Chapter 56. Orbiviruses
Polly Roy
Retroviridae
Chapter 57. Retroviridae: The Retroviruses and Their Replication
Stephen P. Goff
Chapter 58. Human T-Cell Leukemia Virus Types 1 and 2
Patrick L. Green and Irvin S. Y. Chen
Chapter 59. HIVs and Their Replication
Eric O. Freed and Malcolm A. Martin
Chapter 60. Pathogenesis and Medical Aspects of HIV-1 Infection
Oren J. Cohen and Anthony S. Fauci
Chapter 61. Nonhuman Lentiviruses
Ronald C. Desrosiers
Chapter 62. Other Human and Primate Retroviruses
Maxine Linial and Robin A. Weiss
Polyomaviridae
Chapter 63. Polyomaviridae: The Viruses and Their Replication
Charles N. Cole and Suzanne D. Conzen
Chapter 64. Human Polyomaviruses
Eugene O. Major
Papillomaviridae
Chapter 65. Papillomaviruses and Their Replication
Peter M. Howley and Douglas R. Lowy
Chapter 66. Papillomaviruses
Douglas R. Lowy and Peter M. Howley
Adenoviridae
Chapter 67. Adenoviridae: The Viruses and Their Replication
Thomas E. Shenk
Chapter 68. Adenoviruses
Marshall S. Horwitz
Parvoviridae
Chapter 69. Parvoviridae: The Viruses and Their Replication
Nicholas Muzyczka and Kenneth I. Berns
Chapter 70. Parvoviruses
Marshall E. Bloom and Neal S. Young
Herpesviridae
Chapter 71. The Family Herpesviridae: A Brief Introduction
Bernard Roizman and Philip E. Pellett
Chapter 72. Herpes Simplex Viruses and Their Replication
Bernard Roizman and David M. Knipe
Chapter 73. Herpes Simplex Viruses
Richard J. Whitley
Chapter 74. Epstein-Barr Virus and Its Replication
Elliott Kieff and Alan B. Rickinson
Chapter 75. Epstein-Barr Virus
Alan B. Rickinson and Elliott Kieff
Chapter 76. Cytomegaloviruses and Their Replication
Edward S. Mocarski, Jr. and Charmain Tan Courcelle
Chapter 77. Cytomegalovirus
Robert F. Pass
Chapter 78. Varicella-Zoster Virus and Its Replication
Jeffrey I. Cohen and Stephen E. Straus
Chapter 79. Varicella-Zoster Virus
Ann M. Arvin
Chapter 80. Human Herpesviruses 6A, 6B, and 7 and Their Replication
Philip E. Pellett and Geraldina Dominguez
Chapter 81. Human Herpesvirus 6 and Human Herpesvirus 7
Koichi Yamanishi
Chapter 82. Kaposi's Sarcoma–Associated Herpesvirus
Patrick S. Moore and Yuan Chang
Chapter 83. Cercopithecine Herpesvirus (B Virus)
Richard J. Whitley and Julia K. Hilliard
Poxiviridae
Chapter 84. Poxviridae: The Viruses and Their Replication
Bernard Moss
Chapter 85. Poxviruses
Joseph J. Esposito and Frank Fenner
Hepadnaviridae
Chapter 86. Hepadnaviridae: The Viruses and Their Replication
Donald Ganem and Robert Schneider
Chapter 87. Hepatitis B Virus
F. Blaine Hollinger and T. Jake Liang
Unclassified Agents
Chapter 88. Hepatitis Delta Virus
John L. Gerin, John L. Casey, and Robert H. Purcell
Chapter 89. Hepatitis E Virus
Robert H. Purcell and Suzanne U. Emerson
Chapter 90. Prions
Stanley B. Prusiner
Contributing Authors

Ann M. Arvin, M.D.
Professor, Departments of Pediatrics and Microbiology and Immunology
Stanford University School of Medicine, and
Chief, Infectious Diseases
Department of Pediatrics
Lucille Packard Children's Hospital
Stanford, California
L. Andrew Ball, Ph.D.
Professor, Microbiology Department
University of Alabama at Birmingham
Birmingham, Alabama
Kenneth I. Berns, M.D., Ph.D.
Vice-President of Health Affairs
Dean, College of Medicine
Professor, Department of Molecular Genetics and Microbiology
Powell Gene Therapy Center
University of Florida, Gainesville
Gainesville, Florida
Christine A. Biron, M.D.
Esther Elizabeth Brintzenhoff Professor of Medical Science and Chair
Department of Molecular Microbiology and Immunology
Brown University
Providence, Rhode Island
Marshall E. Bloom, M.D.
Laboratory of Persistent Viral Diseases
National Institute of Allergy and Infectious Diseases
National Institutes of Health
Rocky Mountain Laboratories
Hamilton, Montana
Michael D. Bowen, M.D.
Microbiologist, Bioterrorism Preparedness and Response Program
National Center for Infectious Diseases
Centers for Disease Control and Prevention
Hamilton, Montana
Michael J. Buchmeier, Ph.D.
Professor, Division of Virology
The Scripps Research Institute
San Diego, California
Donald S. Burke, M.D.
Professor of International Health
Director, Center for Immunization Research
Johns Hopkins School of Hygiene and Public Health
Baltimore, Maryland
Allan M. Campbell, Ph.D.
Professor
Department of Biological Sciences
Stanford University
Stanford, California
Kathryn M. Carbone, M.D.
Chief, Laboratory of Pediatric and Respiratory Viral Diseases
Center for Biologics Evaluation and Research
U.S. Food and Drug Administration, and
Associate Professor
Departments of Psychiatry and Medicine
Johns Hopkins School of Medicine
Baltimore, Maryland
John L. Casey, Ph.D.
Research Associate Professor
Department of Microbiology and Immunology
Georgetown University
Washington, D.C.
Yuan Chang, M.D.
Professor, Department of Pathology
Columbia University
New York, New York
Robert M. Chanock, M.D.
Chief, Laboratory of Infectious Diseases
National Institute of Allergy and Infectious Disease
National Institutes of Health
Bethesda, Maryland
Janet Chantler, Ph.D.
Associate Professor
Department of Pathology and Laboratory Medicine
The University of British Columbia
Vancouver, British Columbia, Canada
Irvin S. Y. Chen, Ph.D.
Professor, Departments of Microbiology, Immunology, and Molecular Genetics and Medicine
UCLA School of Medicine
UCLA AIDS Institute
Los Angeles, California
Donald M. Coen, Ph.D.
Professor, Department of Biological Chemistry and Molecular Pharmacology
Harvard Medical School
Boston, Massachusetts
Jeffrey I. Cohen, M.D.
Head, Medical Virology Section
Laboratory of Clinical Investigation
National Institute of Allergy and Infectious Diseases
National Institutes of Health
Bethesda, Maryland
Oren J. Cohen, M.D.
Assistant Director for Medical Affairs
National Institute of Allergy and Infectious Diseases
National Institutes of Health
Bethesda, Maryland
Charles N. Cole, Ph.D.
Professor, Department of Biochemistry
Dartmouth Medical School
Hanover, New Hampshire
Peter L. Collins, Ph.D.
Senior Scientist
Laboratory of Infectious Diseases
National Institute of Allergy and Infectious Diseases
National Institutes of Health
Bethesda, Maryland
Richard C. Condit, Ph.D.
Professor, Department of Molecular Genetics and Microbiology
University of Florida College of Medicine
Gainesville, Florida
Suzanne D. Conzen, M.D.
Assistant Professor
Hematology/Oncology Section
Department of Medicine
University of Chicago School of Medicine
Chicago, Illinois
Robert B. Couch, M.D.
Distinguished Service Professor and Director
Center for Infection and Immunity Research
Baylor College of Medicine
Houston, Texas
Charmain Tan Courcelle, M.D.
Department of Microbiology and Immunology
Stanford Univesity School of Medicine
Stanford, California
Clyde Crumpacker, M.D.
Professor of Medicine
Harvard Medical School
Division of Infectious Disease
Beth Israel Deaconess Medical Center
Boston, Massachusetts
Juan Carlos de la Torre, Ph.D.
Associate Professor
Department of Neuropharmacology
The Scripps Research Institute
La Jolla, California
Carlos A. de Mattos, D.V.M., Ph.D.
Visiting Scientist, Rabies Section
Centers for Disease Control and Prevention
Atlanta, Georgia
Cecilia C. de Mattos, D.V.M., M.S., Ph.D.
Visiting Scientist, Rabies Section
Centers for Disease Control and Prevention
Atlanta, Georgia
Victor R. DeFilippis
Graduate Student
Department of Ecology and Evolutionary Biology
University of California, Irvine
Irvine, California
Ronald C. Desrosiers, Ph.D.
Professor of Microbiology and Molecular Genetics
Harvard Medical School
Director, New England Regional Primate Research Center
Southborough, Massachusetts
Daniel DiMaio, M.D.
Professor, Department of Genetics
Yale University School of Medicine
New Haven, Connecticut
Geraldina Dominguez, Ph.D.
Research Associate
Department of Neuroscience
Yerkes Regional Primate Research Center
Atlanta, Georgia
Suzanne U. Emerson, Ph.D.
Head, Molecular Hepatitis
Hepatitis Section
Laboratory of Infectious Diseases
National Institute of Allergy and Infectious Diseases
National Institutes of Health
Bethesda, Maryland
Joseph J. Esposito, Ph.D.
Chief, Poxvirus Section
Division of Viral and Rickettsial Diseases
National Center for Infectious Diseases
Centers for Disease Control and Prevention
Atlanta, Georgia
Mary K. Estes, Ph.D.
Professor, Department of Molecular Virology and Microbiology
Baylor College of Medicine
Houston, Texas
Anthony S. Fauci, M.D.
Director, National Institutes of Allergy and Infectious Diseases
National Institutes of Health
Bethesda, Maryland
Stephen M. Feinstone, M.D.
Chief, Laboratory of Hepatitis Research
Division of Viral Products
Center for Biologics Evaluation and Reseaerch
U.S. Food and Drug Administration
Bethesda, Maryland
Frank Fenner, M.D.
Professor
John Curtin School of Medical Research
The Australian National University
Canberra, Australia
Eric O. Freed, Ph.D.
Principal Investigator
Laboratory of Molecular Microbiology
National Institute of Allergy and Infectious Diseases
National Institutes of Health
Bethesda, Maryland
Paul D. Friesen, Ph.D.
Professor
Institute for Molecular Virology
University of Wisconsin, Madison
Madison, Wisconsin
Donald Ganem, M.D.
Professor and Vice Chair
Department of Microbiology
University of California, San Francisco
San Francisco, California
John L. Gerin, Ph.D.
Director, Department of Molecular Virology and Immunology
Georgetown University
Rockville, Maryland
Stephen P. Goff, Ph.D.
Higgins Professor of Biochemistry
Department of Biochemistry and Molecular Biophysics
Columbia University College of Physicians and Surgeons
New York, New York
Kim Y. Green, M.D.
Laboratory of Infectious Diseases
National Institute of Allergy and Infectious Diseases
National Institutes of Health
Bethesda, Maryland
Patrick L. Green, Ph.D.
Associate Professor
Department of Veterinary Biosciences and Molecular Virology, Immunology and Medical Genetics
Center for Retrovirus Research and the Comprehensive Cancer Center
The Ohio State University
Columbus, Ohio
Harry B. Greenberg, M.D.
Senior Vice President
Research and Development
Chief Scientific Officer
Aviron
Mountain View, California
Diane E. Griffin, M.D., Ph.D.
Professor and Chair
W. Harry Feinstone Department of Molecular Microbiology and Immunology
Johns Hopkins School of Public Health
Baltimore, Maryland
Stephen C. Harrison, Ph.D.
Higgins Professor of Biochemistry
Investigator, Howard Hughes Medical Institute
Department of Molecular and Cellular Biology
Harvard University
Boston, Massachusetts
Julia K. Hilliard, Ph.D.
Viral Immunology Center
Department of Biology
Georgia State University
Atlanta, Georgia, and Department Virology and Immunology
Southwest Foundation for Biomedical Research
San Antonio, Texas
F. Blaine Hollinger, M.D.
Professor of Medicine, Virology, and Epidemiology
Director, Eugene B. Casey Hepatitis and HIV Research Center and Diagnostic Laboratory
Departments of Medicine, Molecular Virology, and Microbiology
Baylor College of Medicine
Houston, Texas
Kathryn V. Holmes, Ph.D.
Department of Microbiology
University of Colorado Health Sciences Center
Denver, Colorado
Jay W. Hooper, Ph.D.
Staff Scientist, Virology Division
United States Army Medical Research Institute of Infectious Diseases
Frederick, Maryland
Marshall S. Horwitz, M.D.
Chair
Department of Microbiology and Immunology
Albert Einstein College of Medicine
Bronx, New York
Yasutaka Hoshino, D.V.M.
Laboratory of Infectious Diseases
National Institute of Allergy and Infectious Diseases
National Institutes of Health
Bethesda, Maryland
Peter M. Howley, M.D.
George Fabyan Professor of Comparative Pathology
Chairman, Department of Pathology
Harvard Medical School
Boston, Massachusetts
Eric Hunter, Ph.D.
Professor of Microbiology
Director, UAB Center for AIDS Research
University of Alabama at Birmingham
Birmingham, Alabama
Albert Z. Kapikian, M.D.
Laboratory of Infectious Diseases
National Institute of Allergy and Infectious Diseases
National Institutes of Health
Bethesda, Maryland
Ali S. Khan, M.D.
Special Pathogens Branch
Divison of Viral and Rickettsial Diseases
National Center for Infectious Diseases
Centers for Disease Control and Prevention
Atlanta, Georgia
Elliott Kieff, M.D., Ph.D.
Harriet Ryan Albee Professor
Departments of Medicine/Microbiology and Molecular Genetics
Harvard Medical School
Boston, Massachusetts
David M. Knipe, Ph.D.
Higgins Professor of Microbiology and Molecular Genetics
Department of Microbiology and Molecular Genetics
Harvard Medical School
Boston, Massachusetts
Daniel Kolakofsky, Ph.D.
Department of Genetics and Microbiology