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Diagnosis of Neurogenetic Disorders: Contribution of Next Generation Sequencing and Deep Phenotyping PDF

96 Pages·2019·6.976 MB·English
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brain sciences Diagnosis of Neurogenetic Disorders Contribution of Next Generation Sequencing and Deep Phenotyping Edited by Alisdair McNeill Printed Edition of the Special Issue Published in Brain Sciences www.mdpi.com/journal/brainsci Diagnosis of Neurogenetic Disorders Diagnosis of Neurogenetic Disorders: Contribution of Next Generation Sequencing and Deep Phenotyping SpecialIssueEditor AlisdairMcNeill MDPI•Basel•Beijing•Wuhan•Barcelona•Belgrade SpecialIssueEditor AlisdairMcNeill UniversityofSheffield UK EditorialOffice MDPI St.Alban-Anlage66 4052Basel,Switzerland This is a reprint of articles from the Special Issue published online in the open access journal BrainSciences (ISSN 2076-3425) from 2018 to 2019 (available at: https://www.mdpi.com/journal/ brainsci/specialissues/diagnosisneurogeneticdisorders) Forcitationpurposes,citeeacharticleindependentlyasindicatedonthearticlepageonlineandas indicatedbelow: LastName,A.A.; LastName,B.B.; LastName,C.C.ArticleTitle. JournalNameYear,ArticleNumber, PageRange. ISBN978-3-03921-610-9(Pbk) ISBN978-3-03921-611-6(PDF) (cid:2)c 2019bytheauthors. ArticlesinthisbookareOpenAccessanddistributedundertheCreative Commons Attribution (CC BY) license, which allows users to download, copy and build upon publishedarticles,aslongastheauthorandpublisherareproperlycredited,whichensuresmaximum disseminationandawiderimpactofourpublications. ThebookasawholeisdistributedbyMDPIunderthetermsandconditionsoftheCreativeCommons licenseCCBY-NC-ND. Contents AbouttheSpecialIssueEditor . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . vii AlisdairMcNeill EditorialforBrainSciencesSpecialIssue: “DiagnosisofNeurogeneticDisorders: Contribution ofNext-GenerationSequencingandDeepPhenotyping” Reprintedfrom:BrainSci.2019,9,72,doi:10.3390/brainsci9030072. . . . . . . . . . . . . . . . . . 1 Jennifer F. Gardner, Thomas D. Cushion, Georgios Niotakis, Heather E. Olson, P. Ellen Grant, Richard H. Scott, Neil Stoodley, Julie S. Cohen, Sakkubai Naidu, Tania Attie-Bitach, Maryse Bonnie`res, Lucile Boutaud, Fe´rechte´ Encha-Razavi, Sheila M. Palmer-Smith, Hood Mugalaasi, Jonathan G. L. Mullins, Daniela T. Pilz and Andrew E. Fry Clinical and Functional Characterization of the Recurrent TUBA1A p.(Arg2His) Mutation Reprintedfrom:BrainSci.2018,8,145,doi:10.3390/brainsci8080145 . . . . . . . . . . . . . . . . . 3 Christopher Buckley, Lisa Alcock, Rı´ona McArdle, Rana Zia Ur Rehman, Silvia Del Din, ClaudiaMazza`,AlisonJ.YarnallandLynnRochester TheRoleofMovementAnalysisinDiagnosingandMonitoringNeurodegenerativeConditions: InsightsfromGaitandPosturalControl Reprintedfrom:BrainSci.2019,9,34,doi:10.3390/brainsci9020034. . . . . . . . . . . . . . . . . . 15 Emilia M. Gatto, Gustavo Da Prat, Jose Luis Etcheverry, Guillermo Drelichman and Martin Cesarini Parkinsonisms and Glucocerebrosidase Deficiency: A Comprehensive Review for Molecular and Cellular Mechanism of Glucocerebrosidase Deficiency Reprintedfrom:BrainSci.2019,9,30,doi:10.3390/brainsci9020030. . . . . . . . . . . . . . . . . . 36 Julio-Ce´sarGarc´ıaandRosa-HelenaBustos TheGeneticDiagnosisofNeurodegenerativeDiseasesandTherapeuticPerspectives Reprintedfrom:BrainSci.2018,8,222,doi:10.3390/brainsci8120222 . . . . . . . . . . . . . . . . . 51 EdwardBotsford,JayanGeorgeandEllenE.Buckley Parkinson’sDiseaseandMetalStorageDisorders:ASystematicReview Reprintedfrom:BrainSci.2018,8,194,doi:10.3390/brainsci8110194 . . . . . . . . . . . . . . . . . 69 v About the Special Issue Editor Alisdair McNeill, Dr, received his MBChB (Hons) from Edinburgh University in 2004, and obtained his MRCP (UK) in 2007. He undertook Medical SHO training in Newcastle-upon-Tyne and Edinburgh, Clinical Genetics SpR training in the West Midlands, and an MRC Clinical Research Training Fellowship at UCL. His research interests are focused on the genetic causes of neurologicaldisordersinbothchildrenandadults.McNeillisidentifyingnewwaysofphenotyping patients in order to improve diagnosis and disease monitoring, for example, through using patient-wearable movement sensors (collaboration with INSIGNEO) in adults with neurological disordersand3-dimensionalfacialimageanalysis(collaborationwithProfPeterHammond,Oxford) inchildrenwithchromosomemicrodeletions. Heisalsointerestedinstudyingvariantsofuncertain significanceasidentifiedinclinicalgeneticstesting,andresolvingtheirpathogenicitythroughclinical phenotypingandinvitrostudies. vii brain sciences Editorial Brain Sciences Editorial for Special Issue: “Diagnosis of Neurogenetic Disorders: Contribution of Next-Generation Sequencing and Deep Phenotyping” AlisdairMcNeill DepartmentofNeuroscience,UniversityofSheffield,385aGlossopRoad,SheffieldS102HQ,UK; a.mcneill@sheffield.ac.uk Received:11March2019;Accepted:19March2019;Published:26March2019 InthisSpecialIssuewebringtogetherpapersdemonstratingtheneedforbothdetailedgenomic andphenotypicstudiestoaidourscientificandclinicalunderstandingofneurogeneticdisorders. Genomic techniques such as genome and exome sequencing are vital tools for diagnosing rare neurogeneticdisordersandidentifyingnovelcausalgenes[1,2].InthisSpecialIssue,Gardnerand colleagues[3]utilisegenomictechniquestoidentifyaseriesofindividualswithbrainmalformations duetotherecurrentTUBA1Ap.Arg2Hisvariant.Thispaperalsodescribesthedetailedphenotyping requiredtoaidintheinterpretationofnovelgenomicvariants.VariantsinGBA1,thegenecausing Gaucher Disease (GD), are associated with an increased risk of Parkinson’s Disease (PD) [4,5]. Gatto andcolleaguesreviewthisimportantareaanddescribehowsimpleclinicalobservations helpedbegintheidentificationofthisimportantriskfactorforPD[6].Genomictechniquesarecrucial forthediagnosisofneurogeneticdisorders[7]. GarciaandBustos[8]reviewtheimpactofsuch techniquesforboththediagnosisofneurogeneticdiseasesandincreasingourscientificunderstanding ofthesedisorders. Itisonlythroughtheco-developmentofbothnovelgenomicandphenotypic assessmentsthatwewillbeabletofullyunderstandthepathogenesisofneurogeneticdisordersand identifynoveltreatments. ConflictsofInterest:Theauthordeclaresnoconflictofinterest. References 1. Hempel,A.;Pagnamenta,A.T.;Blyth,M.;Mansour,S.;McConnell,V.;Kou,I.;Ikegawa,S.;Tsurusaki,Y.; Matsumoto,N.;Lo-Castro,A.;etal. DeletionsanddenovomutationsofSOX11areassociatedwitha neurodevelopmentaldisorderwithfeaturesofCoffin-Sirissyndrome. J.Med. Genet. 2016,53,152–162. [CrossRef][PubMed] 2. Blanchet,P.;Bebin,M.;Bruet,S.;Cooper,G.M.;Thompson,M.L.;Duban-Bedu,B.;Gerard,B.;Piton,A.; Suckno,S.;Deshpande,C.;etal. MYT1Lmutationscauseintellectualdisabilityandvariableobesityby dysregulatinggeneexpressionanddevelopmentoftheneuroendocrinehypothalamus.PlosGenet.2017,13, e1006957.[CrossRef][PubMed] 3. Gardner,J.F.;Cushion,T.D.;Niotakis,G.;Olson,H.E.;Grant,P.E.;Scott,R.H.;Stoodley,N.;Cohen,J.S.; Naidu,S.;Attie-Bitach,T.;Bonnières,M.;Boutaud,L.;Encha-Razavi,F.;Palmer-Smith,S.M.;Mugalaasi,H.; Mullins,J.G.L.;Pilz,D.T.;Fry,A.E.ClinicalandFunctionalCharacterizationoftheRecurrentTUBA1A p.(Arg2His)Mutation.BrainSci.2018,8,145.[CrossRef][PubMed] 4. McNeill,A.;Duran,R.;Proukakis,C.;Bras,J.;Hughes,D.;Mehta,A.;Hardy,J.;Wood,N.W.;Wood,A.H.V. HyposmiaandcognitiveimpairmentinGaucherdiseasepatientsandcarriers.Mov.Disord.2012,27,526–532. [CrossRef][PubMed] 5. McNeill,A.;Duran,R.;Hughes,D.A.;Mehta,A.;Schapira,A.H.Aclinicalandfamilyhistorystudyof Parkinson’sdiseaseinheterozygousglucocerebrosidasemutationcarriers.J.Neurol.Neurosurg.Psych.2012, 83,853–854.[CrossRef][PubMed] BrainSci.2019,9,72;doi:10.3390/brainsci9030072 1 www.mdpi.com/journal/brainsci

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