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Bioprocess and Algae Reactor Technology, Apoptosis PDF

266 Pages·1997·14.99 MB·English
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59 Advances in Biochemical Engineering Biotechnology gniganaM Editor: .T repehcS regnirpS nilreB grebledieH New York anolecraB Budapest Hong Kong nodnoL Milan siraP Santa aralC eropagniS oykoT ssecorpoiB dna Algae rotcaeR ,ygolonhceT sisotpopA With Contributions by M. A1-Rubeai, J. F. Cornet, C. G. Dussap, C. B. Elias, J. Gomes, J.-B. Gros, D. C. Hill, J. B. Joshi, A.S. Menawat, L. J. Nisbet, O. Pulz, K. Scheibenbogen, S. R. Wrigley With 56 Figures and 1 Color Figure r e g n~ i r p S This series represents critical reviews on the present and future trends in Biochemical Engineering/Biotechnology, including microbiology, genetics, biochemistry, chemistry, computer science and chemical engineering. It is addressed to all scientists at universities and in industry who wish to keep up- to-date in this.extremly fast developing area of science. In general, special volumes are dedicated to selected topics and are edited by well known guest editors. The managing editor and publisher will however always be pleased to receive suggestions and supplementary information. Manuscripts are accepted in English. In references Advances in Biochemical Engineering/Biotechnology is abbreviated as Adv. Biochem. Engin./Biotechnol. as a journal. ISBN3-540-63417-7 Springer-Verlag Berlin HeidelbergNewYork Library of Congress Catalog Card Number 72-152360 This work is subject to copyright. All rights are reserved, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, re-use of illustrations, recitation, broadcasting, reproduction on microfilms or in other ways, and storage in data banks. Duplication of this publication or parts thereof is only permitted under the provisions of the German Copyright Law of September 9, 1965, in its current version, and a copyright fee must always be paid. (cid:14)9 Springer-Verlag Berlin Heidelberg 1998 ISSN 5416-4270 Printed in Germany The use of registered names, trademarks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. Typesetting: Macmillan IndiaLtd., Bangalore-25 SPIN: 10573576 02/3020-5432 1 0-Printedonacid-freepaper Managing Editor Professor Dr. T. Scheper Institute of Technical Chemistry, University of Hannover CallinstraBe 3, D - 30167 Hannover/FRG Editorial Board Prof. .rD .W Babel Center of Environmental Research ellaH-gizpieL GmbH noitceS of latnemnorivnE Microbiology eBartsresomreeP ,51 D - 04318 Leipzig/FRG Prof. .rD H.W. Blanch University of Califomia Department of Chemical Engineering ,ylekreB CA 94720-9989/USA Prof. .rD .hC L. Cooney sttesuhcassaM Institute of Technology Department of Chemical Engineering 25 Ames Street ,egdirbmaC MA 02139/USA Prof. .rD S.-O. Enfors tnemtrapeD of Biochemistry and Biotechnology Royal Institute of Technology negnirkinkeT ,43 S - 001 44 nedewS/mlohkcotS Prof. .rD K.-E. L. Eriksson Center for Biological Resource Recovery The University of Georgia A214 Life Science Building Athens, GA 30602-7229/USA Prof. .rD A. Fiechter etutitsnI of Biotechnology Eidgen6ssische Technische Hochschule ETH-H6nggerberg, CH - 8093 dnalreztiwS/hcir0Z Prof. .rD A. M. Klibanov sttesuhcassaM Institute of Technology Department of Chemistry ,egdirbmaC MA 02139/USA Prof. .rD B. Mattiasson tnemtrapeD of Biotechnology Chemical Center, Lund University P.O. Box 124, S - 122 00 Lund/Sweden Prof. .rD S. .B Primrose 12 Amersham Road High Wycombe, Bucks HP 31 6QS/UK VI Editorial Board Prof. Dr. H. J. Rehm Westt~lische Wilhelms-Universit~t Mtinster Institute of Microbiology Corrensstr. 3, D - 48149 Mianster/FRG Prof. Dr. P. .L Rogers Department of Biotechnology Faculty of Applied Science The University of New South Wales Sydney 2052/Australia Prof. Dr. H. Sahm Institute of Biotechnology Forschungszentrum JOlich GmbH D - 52428 Jtilich/FRG Prof. Dr. K. Schiigerl Institute of Technical Chemistry University of Hannover CallinstraBe 3, D- 30167 Hannover/FRG Prof. Dr. .G .T Tsao Director, Lab. of Renewable Resources Eng. A. A. Potter Eng. Center, Purdue University West Lafayette, IN 47907/USA Dr. ,K Venkat Phyton Inc., 125 Langmuir Lab. 95 Brown Road, Ithaca, NY 14850-1257/USA Prof. Dr. J. Villadsen Department of Biotechnology Technical University of Denmark Bygning 223, DK- 2800 Lyngby/Denmark Prof. Dr. U yon Stockar Swiss Federal Institute of Technology Lausanne Institut de G6nie Chimique CH- 1015 Lausanne/Switzerland Prof. Dr. C Wandrey Institute of Biotechnology Forschungszentrum J01ich GmbH P.O. Box 1913, D- 52428 J01ich/FRG Attention all "Enzyme Handbook" Users: A file with the complete volume indexes Vols. 1 through 11 in delimited ASCII format is available for downloading at no charge from the Springer EARN mailbox. Delimited ASCII format can be imported into most databanks. The file has been compressed using the popular shareware program "PKZIP" (Trademark of PKware INc., PKZIP is available from most BBS and shareware distributors). This file distributed without any expressed or implied warranty. To receive this file send an e-mail message to: [email protected]. The message must be: "GET/ENZHB/ENZ_HB.ZIP". SPSERV is an automatic data distribution system. It responds to your message. The following commands are available: HELP returns a detailed instruction set for the use of SVSERV, DR )eman( returns a list of files available in the directory "name", INDEX )eman( same as "DIR" CD >eman< changes to directory "name", SEND >emanelif< invokes a message with the file "filename" GET >emanelif< same as "SEND". Table of Contents Fed-Batch Bioproduction of Spectinomycin J. Gomes, A. S. Menawat ................................ 1 Role of Hydrodynamic Shear on Activity and Structure of Proteins C. B. Elias, J. B. Joshi ................................... 47 Novel Screen Methodologies for Identification of New Microbial Metabolites with Pharmacological Activity D. C. Hill, S. K. Wrigley, L. J. Nisbet ...................... 73 Photobioreactors: Design and Performance with Respect to Light Energy Input O. Pulz, K. Scheibenbogen ............................... 123 Kinetics and Energetics of Photosynthetic Microorganisms in Photobioreactors J.-F. Cornet, C. G. Dussap, J.-B. Gros ...................... 153 Apoptosis and Cell Culture Technology M. AI-Rubeai ............................................ 225 Author Index Volumes 51 - 59 .......................... 251 Subject Index ......................................... 255 Fed-Batch Bioproduction of Spectinomycin J. Gomes* and A.S. Menawat** * Department of Biochemical Engineering & Biotechnology, Indian Institute of Technology, Delhi, Hauz Khas, New Delhi 110016, India ** Advanced Solutions & Know-how, 1426, Hidden Creek North, Saline, MI-48176, USA Actinomycetes produce about 67% of the known antibiotics covering a wide range of chemical structures. However, their filamentous growth present several problems during industrial processes. Among these problems oxygen transfer limitation is critical. In this chapter we present the role of oxygen in spectinomycin production by a Streptomyces species. Spectinomycin, a broad spectrum antibiotic effective against penicillin resistant gonorrhea, is an aminoglycoside constituted from two glucose moieties. Its bioproduction is strongly influenced by glucose and oxygen. We have shown that for a fixed dissolved oxygen concentration, there are two specific glucose concentrations which give maximum final titers of spectinomycin. The bi-modal maximum indicates the influence of two intermediate metabolites in spectinomycin biosynthesis. We propose a mechanism for spectino- mycin biosynthesis and subsequently develop a model based on this mechanism. The proposed mechanism for spectinomycin biosynthesis is validated by successfully reconstructing the air flow rate profiles. A nonlinear systems theory technique termed External Differential Representation, is implemented to reconstruct the spectinomycin bioconversion process which then predicts the spectinomycin concentration from the air flow rate profile. This signifies that spectinomycin titers in industrial fed-batch processes can be controlled if a priori information about the air flow rate profile yielding maximum spectinomycin is available. List of Symbols and Abbreviations .................................. 2 1 Introduction ............................................. 4 1.1 Physiology of Antibiotics ................................... 4 1.1.t Carbon Regulation .................................... 6 1.1.2 Nitrogen Regulation ................................... 6 1.1.3 Phosphate Regulation . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7 2 Spectinomycin Biosynthesis ..................................... 8 2.1 Organism and Metabolism .................................. 8 2.2 Role of Glucose and Oxygen ................................. 10 3 Bioproduction of Spectinomycin .................................. 12 3.1 Preparation of Inoculum .................................... 12 3.2 Bioproduction Media ...................................... 13 3.3 On-Line and Off-Line Analysis ................................ 13 3.4 Spectinomycin Estimation ................................... 15 4 Fed-Batch Cultivation ........................................ 17 4.1 Glucose Feed Optimization .................................. 17 4.2 Characteristics of Spectinomycin Bioproduction ...................... 20 4.3 Influence of Residual Glucose Concentration ........................ 21 4.4 Variations in Air Flow Rate .................................. 22 5 Two Metabolite Hypothesis .................................... 23 6 Exponential Structure for Mechanistic Model .......................... 25 6.1 Model Simulation ........................................ 26 7 Prediction ............. .................................. 31 7.1 External Differential Representation ............................. 31 7.2 Air Flow Rate .......................................... 32 7.3 Spectinomycin .......................................... 36 secnavdA ni lacimehcoiB /gnireenignE ,ygolonhcetoiB .loV 95 gniganaM :rotidE .hT repehcS (cid:14)9 galreV-regnirpS nilreB grebledieH 8991

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This volume in the series "Advances in Biochemical Engineering/Biotechnology" focuses on bioprocess and algae reactor technology and apoptosis. All aspects of this interdisciplinary technology, where knowledge, methods and expertise are required from chemistry, biochemistry, microbiology, genetics,
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