Antifungal Agents Advances and Problems Special Topic Progress in Drug Research Edited by Ernst Jucker, Basel Advisor Annemarie Polak Authors Johannes MOller and Annemarie Polak Reinhard Kappe and Dagmar Rimek Annemarie Polak Michael Seibold and Kathrin Tintelnot Springer Basel AC Editor Dr. E. Jucker Steinweg 28 C H-41 07 Ettingen Switzerland e-mail: [email protected] A CIP catalogue record for this book is available from the Library of Congress, Washington D.C., USA Bibliographic information published by Die Deutsche Bibliothek. Die Deutsche Bibliothek lists this publication in the Deutsche Nationalbibliografie; detailed biblio graphic data is available in the Internet at <http://dnb.ddb.de>. ISBN 978-3-7643-6926-2 ISBN 978-3-0348-7974-3 (eBook) DOI 10.1007/978-3-0348-7974-3 The Publisher and Editor cannot assume any legal responsibility for information on drug dosage and administration contained in this publication. 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TCF 00 Cover design and layout: Graflin Graphic Design, Basel ISBN 978-3-7643-6926-2 987654321 www.birkhauser-science.com Contents Classification and taxonomy of fungi pathogenic for warm-blooded hosts . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 By Johannes Muller and Annemarie Polak Fungal diseases ................................................................ 1 3 By Reinhard Kappe and Dagmar Rimek Diagnosis of fungal diseases. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 39 By Reinhard Kappe and Dagmar Rimek Antifungal therapy - state of the art at the beginning of the 21 st century. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 59 By Annemarie Polak Susceptibility testing of fungi - current status and open questions................................................................ 191 By Michael Seibold and Kathrin Tintelnot Index ........................................................................... 243 Foreword by the Editor In the early 1990s Annemarie Polak and P.G. Hartmann expressed some hope that the battle for an effective therapy in dermatology as well as in deep mycoses could be won (PDR 37, 181 (1991». Five years later (PDR 49, 219 (1996», in an update of the above review and in summarising the then pre vailing situation, A. Polak came to the conclusion that the search for new antifungals was an everlasting battle: despite the fact that important new antifungals were discovered and introduced into therapy, the breakthrough was still far away. This battle is still going on, and this volume Antifungal Agents - Advances and Problems aims at providing the reader with a concise overview of the situation, but might also give an impulse to further research in this important field of human disorders. Antifungal Agents - Advances and Problems contains five chapters, each rep resenting an up-to-date review covering the major problems of medical mycology. Physicians confronted with the various forms and problems of fungal diseases will welcome this monograph as a useful tool in their daily work and as a source of relevant original literature. Advanced students will benefit from the concise form of the presentation covering all major aspects of antifungals and their therapeutic application. The main emphasis of the book is on antifungal therapy (chapter 4), cov ering the present state of art of chemotherapy for dermatomycoses, subcu taneous and invasive mycoses and also thoroughly dealing with open ques tions and unsolved problems. In addition to this status quo review, an outlook into the future, to new biochemical and/or genetic targets, as well as to the new approaches inter fering with the host defence or the virulence of fungi, which will become more important in the future, is provided. The author of this chapter, Annemarie Polak, not only shared her extended knowledge and experience but she also acted as Advisor for the entire monograph. The Editor is espe cially indebted to her. The first chapter deals with various growth forms of the pathogenic fungi and classifies these fungi based on characteristics of their sexual life cycle and on their RNA/DNA pattern. The second chapter describes the clinical manifestations of the complete set of human fungal infections known today. In addition to the clinical symp- vii toms, on which the main emphasis lies, data on prevalence, overall impor tance and epidemiology are provided. The third chapter deals with the various laboratory methods in the field of diagnosis of fungal infections which are necessary and suitable for a timely and accurate diagnosis. The identification techniques are described accord ing to the fungal group involved, i.e. techniques for yeast and filamentous fungi are separate. The last chapter deals with the field of susceptibility testing. On one hand the most relevant standard methods and their intrinsic problems related to media, fungi or drugs are presented; on the other hand, the usefulness of sus ceptibility data in connection with epidemiology and guidance of therapy is discussed. A special part of this last chapter is dedicated to the question whether a correlation exists between in vitro and in vivo data. The Editor is grateful to the authors for their comprehensively written arti cles which in a very concise form cover all aspects of the current situation in the field of fungal diseases and therapeutic possibilities. My sincere thanks also go the members of Birkhauser Publishing who participated in the pro duction of this monograph. Thus, I am indebted to Beatrice Menz and Gabriele Fertoszogi for their great help as members of the Editorial Depart ment. H.-P. Ebneter, Eduard Mazenauer and Gregor Messmer did contribute - as in the past decades - their vast knowledge, experience and innovative skill in the production of this book: for all their efforts and, especially, for the harmonious cooperation, I cannot thank all of them enough. My very special thanks go to Hans-Peter Thur, Birkhauser Publishing CEO. For a number of decades, Hans-Peter Thur participated directly in the efforts linked with the PDR series, and it was he who initiated this new series of monographs dealing with specific topics of drug research. My gratitude to Hans-Peter is linked with sadness that due to my advanced age and my wish for fewer responsibilities, this harmonious cooperation and our team-work come to an end with this PDR Special Topic volume. Basel, February 2003 Dr. E. Jucker Antifungal Agents -Advances and Problems (E. lucker, Ed.) ©2003 Birkhauser Verlag, Basel (Switzerland) Classification and taxonomy of fungi pathogenic for warm-blooded hosts By Johannes MUlierl and Annemarie Polak2 IBrandelweg 24, D-79312 Emmendingen-Maleck, Germany 2Spitzenrainweg 45, CH-4147 Aesch, Switzerland Johannes MOiler received the Doctor rerum naturalium from the University of Munich in 1956. In 1960, he joined the Institute ofH ygiene and Microbiology at Freiburg i. Br. At this time there was a department for extensive medical and microbiological diagnos tics in bacteriology, virology, parasitology, and serology. Johannes Muller created a diagnostic and research unit for med ical mycology. His main interest was electron microscopy. In 1973, Johannes Muller was awarded the title "Medizinischer Fachmikrobiologe DHGM"; in 1978, he received the "Habilita tion" for medical microbiology and hygiene at the medical fac ulty of the University Freiburg and became professor in 1984. From 1975 to 1986 he was head of the division ofp arasitology and mycology at the institute of hygiene, and from 1986-1992 he was head of the mycology unit. Johannes Muller was mainly interested in host-parasite relationships in mycology, ultra structure, pathogenesis, and immunology and development of new diagnostic methods. He was active member of various international research societies and later became an honorary member of several of these societies. Annemarie Polak received her Ph.D. in microbiology from the Eidgenossische Technische Hochschule (ETH), Zurich, Switzerland, in 1969. In the same year, she joined Hoffmann LaRoche as a microbiolo gist in the tropical medicine group. Her research interest included mode of action studies and detecting new antifungals. She became a specialist in the field of research on antifungals and was later promoted to Scientific Expert, a cadre position at Roche. In 1989, A. Polak did her "Habilitation" at the Institute of Microbiology and Hygiene in the Medical Faculty of the Uni versity Freiburg i. Br. (Germany) and received a professorship for medical mycology in 1995. Summary The kingdom of fungi is described with emphasis on fungi pathogenic for warm-blooded hosts. The various growth forms of the most frequent causative agents of fungal infections are described and their classification based on characteristics of their sexual life cycle and on their DNA/RNA pat tern is summarized in various tables. Classification and taxonomy of fungi pathogenic for warm-blooded hosts Contents 1 Introduction ............ 3 2 Morphology 3 3 Classification 6 4 Nomenclature ....... 7 5 Taxonomy .... 8 5.1 Zygomycota ......... , .......... 9 5.2 Ascomycota ...... 10 5.3 Basidiomycota 12 References 12 Keywords Taxonomy, pathogenic fungi, Zygomycota, Ascomycota, Basidiomycota. 1 Introduction Fungi are regarded as a separate kingdom of eukariotic organisms apart from plants and animals. They are heterotrophic, Le., lacking chlorophyll, and are dependent on organiC carbon compounds for their nutrition. They feed by excretion of enzymes into the colonized substrate and subsequent uptake of digested compounds through the cell wall and cytoplasmic mem brane. 2 Morphology Like human cells, fungi are eukariotic cells, in contrast to bacteria. The genome is organized in a nucleus surrounded by a membrane, which is con tinuous with the endoplasmatic reticulum. Cellular division is accompanied by meiosis or mitosis. Cell organelles such as mitochondria, ribosomes, vac uoles, lipid bodies, and other storage inclusions are also present. The only fungus-specific target for antifungal chemotherapy is the cell wall, which 3 Johannes Muller and Annemarie Polak Table 1. Causative agents of zygomycosis; Division: Zygomycota Order Family Genus Species Mucorales Mucoraceae Absidia A. corymbifera Apophysomyces A. elegans Mucor M. circinelloides M. racemosus Rhizomucor R. miehei R. pusi/lus R. variabilis Rhizopus R. microsporus R.oryzae Cunninghamellaceae Cunninghamella C. bertholletiae Syncephalastraceae Syncephalastrum S. racemosum Saksenaeaceae 5aksenaea S. vasiformis Mortierellales Mortierellaceae Mortierella M. wolfii Entomophthorales Basidiobolaceae Basidiobolus B. ranarum Ancylistaceae Conidiobolus C. coronatus C. incongruus consists mainly (90%) of the carbohydrates glucan, mannan, and chitin, the latter two being absent in mammalian cells. Pathogenic fungi grow in two different morphologic shapes. The main elements are apically growing hyphae. These filamentous fungi invade the substrate by single hyphae. The entire thallus is called mycelium. Unicellu lar fungi grow in the yeast form characterized by propagating in forming buds. Suppression of hyphal growth due to environmental factors, e.g., nutri tional conditions, temperature, host defense etc., often leads to deformation of the fungal thallus. This phenomenon is called dimorphism and must be regarded in diagnostic procedures. Dimorphism is conspicuous for Histo plasma capsula tum, Blastomyces dermatitidis, Paracoccidioides brasiliensis, and Penicillium marneffei, the hyphal form being saprophytic and the parasitic one being yeast-like in shape. Candida albicans also shows dimorphism; however, both phases of this species are responsible for pathogenicity. The majority of fungi pass sexual life cycles (teleomorph) with formation of sexual propagules. The sexual life cycle is the basis of ranging the fungi in a natural classification system with regard to biological relationship. The teleomorph life cycle of fungi pathogenic for warm-blooded hosts, however, 4
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