Algorithms and Computation: 20th International Symposium, ISAAC 2009, Honolulu, Hawaii, USA, December 16-18, 2009. Proceedings PDF
Preview Algorithms and Computation: 20th International Symposium, ISAAC 2009, Honolulu, Hawaii, USA, December 16-18, 2009. Proceedings
Lecture Notes in Computer Science 5878 CommencedPublicationin1973 FoundingandFormerSeriesEditors: GerhardGoos,JurisHartmanis,andJanvanLeeuwen EditorialBoard DavidHutchison LancasterUniversity,UK TakeoKanade CarnegieMellonUniversity,Pittsburgh,PA,USA JosefKittler UniversityofSurrey,Guildford,UK JonM.Kleinberg CornellUniversity,Ithaca,NY,USA AlfredKobsa UniversityofCalifornia,Irvine,CA,USA FriedemannMattern ETHZurich,Switzerland JohnC.Mitchell StanfordUniversity,CA,USA MoniNaor WeizmannInstituteofScience,Rehovot,Israel OscarNierstrasz UniversityofBern,Switzerland C.PanduRangan IndianInstituteofTechnology,Madras,India BernhardSteffen TUDortmundUniversity,Germany MadhuSudan MicrosoftResearch,Cambridge,MA,USA DemetriTerzopoulos UniversityofCalifornia,LosAngeles,CA,USA DougTygar UniversityofCalifornia,Berkeley,CA,USA GerhardWeikum Max-PlanckInstituteofComputerScience,Saarbruecken,Germany YingfeiDong Ding-ZhuDu OscarIbarra(Eds.) Algorithms and Computation 20th International Symposium, ISAAC 2009 Honolulu, Hawaii, USA, December 16-18, 2009 Proceedings 1 3 VolumeEditors YingfeiDong UniversityofHawaii DeptartmentofElectricalandComputerEngineering HolmesHall483 2540DoleStreet Honolulu,HI96822,USA E-mail:[email protected] Ding-ZhuDu UniversityofTexasatDallas DepartmentofComputerScience Richardson,TX75080,USA E-mail:[email protected] OscarIbarra UniversityofCalifornia DepartmentofComputerScience SantaBarbara,CA93106,USA E-mail:[email protected] LibraryofCongressControlNumber:2009939433 CRSubjectClassification(1998):F.2,G.1,G.2,G.3,G.4,I.2.2,I.3,D.2 LNCSSublibrary:SL1–TheoreticalComputerScienceandGeneralIssues ISSN 0302-9743 ISBN-10 3-642-10630-7SpringerBerlinHeidelbergNewYork ISBN-13 978-3-642-10630-9SpringerBerlinHeidelbergNewYork Thisworkissubjecttocopyright.Allrightsarereserved,whetherthewholeorpartofthematerialis concerned,specificallytherightsoftranslation,reprinting,re-useofillustrations,recitation,broadcasting, reproductiononmicrofilmsorinanyotherway,andstorageindatabanks.Duplicationofthispublication orpartsthereofispermittedonlyundertheprovisionsoftheGermanCopyrightLawofSeptember9,1965, initscurrentversion,andpermissionforusemustalwaysbeobtainedfromSpringer.Violationsareliable toprosecutionundertheGermanCopyrightLaw. springer.com ©Springer-VerlagBerlinHeidelberg2009 PrintedinGermany Typesetting:Camera-readybyauthor,dataconversionbyScientificPublishingServices,Chennai,India Printedonacid-freepaper SPIN:12805785 06/3180 543210 Preface Thepapersinthisvolumewerepresentedatthe20thAnnualInternationalSym- posiumonAlgorithmsandComputation,heldDecember16–18,2009,inHawaii, USA.InresponsetotheCall-for-Papers,279papersweresubmitted.Eachpaper receivedatleastthreereviewsbyeitherProgramCommitteemembersorexperts selectedbyProgramCommitteemembers.Inall,120paperswereselectedbased onthe reviewreportsandareincludedinthisvolume.Wewishtothankallwho submitted papers for consideration and all Program Committee members and reviewersfor their excellent and hard work.To our invited speakers,we wish to thank you for sharing your expertise. Finally, we wish to thank our colleagues who contributed to the success of the symposium and the sponsors for their assistance and support. December 2009 Yingfei Dong Ding-Zhu Du Oscar Ibarra Organization Program Committee Co-chairs Yingfei Dong University of Hawaii, USA Ding-Zhu Du University of Texas at Dallas, USA Oscar Ibarra University of California, Santa Barbara, USA Advisory Committee Chair Takeshi Tokuyama Tohoku University, Japan Advisory Committee Tetsuo Asano Japan Advanced Institute of Science and Technology, Japan Kyung-Yong Chwa Korea Advanced Institute of Science and Technology, Republic of Korea Francis Y.L. Chin The University of Hong Kong, Hong Kong Ding-Zhu Du The University of Texas at Dallas, USA Peter Eades The University of Sydney, Australia Wen Lian Hsu Academia Sinica, Taiwan Der Tsai Lee Academia Sinica, Taiwan Takao Nishizeki Tohoku University, Japan Local Arrangements Chair Yingfei Dong University of Hawaii, USA Publicity, Webmaster, and Online Conference System (OCS) Co-chairs Xiaofeng Gao University of Texas at Dallas, USA Donghyun Kim University of Texas at Dallas, USA Financial Co-chairs Jiaofei Zhong University of Texas at Dallas, USA Feng Zou University of Texas at Dallas, USA VIII Organization Program Committee Alberto Apostolico Georgia Insititute of Technology, USA Giorgio Ausiello Universit`a di Roma, Italy Wolfgang Bein University of Nevada, USA Jin-Yi Cai University of Wisconsin, USA Zhipeng Cai Mississippi State University, USA Zhenfu Cao Shanghai Jiaotong University, China Wei Chen Microsoft Research Asia, China Maggie Cheng Missouri University of Science and Technology, USA Siu-Wing Cheng Hong Kong University of Science and Technology, Hong Kong Yongxi Cheng University of Alberta, Canada Marek Chrobak University of California, Riverside, USA Kyung-Yong Chwa Korea Advanced Institute of Science and Technology, Republic of Korea Bhaskar Dasgupta University of Illinois at Chicago, USA Narsingh Deo University of Central Florida, USA Omer Egecioglu University of California, Santa Barbara, USA Juraj Hromkovic ETH Zentrum, Switzerland Wenlian Hsu Academia Sinica, Taiwan Xiaodong Hu Chinese Academy of Sciences, China Kazuo Iwama Kyoto University, Japan Ravi Janardan University of Minnesota, USA Tao Jiang University of California, Riverside, USA Liying Kang Shanghai University, China Samir Khuller University of Maryland, USA Angsheng Li Chinese Academy of Sciences, China Shlomo Moran Technion, USA Koji Nakano Hiroshima University, Japan Hung Ngo University of Buffalo, US Mitsunori Ogihara University of Miami, USA E.K. Park National Science Foundation, USA Suneeta Ramaswami Rutgers University, USA Sanjay Ranka University of Florida, USA Sanguthevar RajasekaranUniversity of Connecticut, USA Balasubramanian Ravikumar Sonoma State University, USA Paul Spirakis University of Patras,Greece Organization IX Kazuo Sugihara University of Hawaii, USA Xiaoming Sun Tsinghua University, China Subhash Suri University of California, Santa Barbara, USA My T. Thai University of Florida, USA Takeaki Uno NII, Japan Jie Wang University of Massachusetts Lowell, USA Lusheng Wang City University of Hong Kong, Hong Kong Wei Wang Xi’an Jiaotong University, China Weili Wu University of Texas at Dallas, USA Yibo Xue Tsinghua University, China Hsu-Chun Yen National Taiwan University, Taiwan Wenan Zang Hong Kong University, Hong Kong Zhao Zhang Xingjiang University, China Hong Zhu Huadong Normal University, China Referees Abdullah Arslan Xin Han Yoshio Okamoto Sang Won Bae Rafi Hassin Joseph O’Rourke Gill Barequet Tomio Hirata Sheung-Hung Poon Doina Bein Junwei Huang Iris Reinbacher Said Bettayeb Keiko Imai Kunihiko Sadakane Hans-J. Boeckenhauer Volkan Isler Yan Shi Vincenzo Bonifaci Naoyuki Kamiyama Yi Shi Peter Brucker Donghyun Kim Charles Shields Jr. Tian-Ming Bu Sangjin Kim Marcelo Siqueira Saverio Caminiti Carl Kingsford Sagi Snir B. Charron-Bost Dennis Komm Bettina Speckmann Zhi-Zhong Chen Richard Kralovic Andreas Sprock Ho-Lin Chen Zbynˇek Kˇrivka William Steiger Yinjie Chen Yokesh Kumar Monika Steinova BhadrachalamChitturi Luigi Laura Hal Sudborough Ovidiu Daescu Ronny Lempel Hisao Tamaki Mirela Damian Jian Li Suguru Tamaki Thomas Erlebach Chun-Cheng Lin Ramki Thurimella Zheng Fang Hsueh-I Lu Takeshi Tokuyama Paolo Ferragina Pinyan Lu Shi-Chun Tsai Robin Flatland Joe Mitchell Ryuhei Uehara Herv´e Fournier Shuichi Miyazaki Antoine Vigneron Paolo Giulio Franciosa Tobias Moemke Xiang Wan Rajiv Gandhi Linda Morales Yajun Wang Xiaofeng Gao Pat Morin Zhong Wang Bill Gauvin Hiroki Morizumi James Willson Mordecai Golin Hiroshi Nagamochi Yulai Xie Prosenjit Gupta Harumichi Nishimura Jinhui Xu X Organization Bo Yan Tian-Li Yu Jiaofei Zhong Jie Yang Shmuel Zaks Binhai Zhu Sivan Yogev Guochuan Zhang Feng Zou Neal Young Wei Zhang Sponsoring Institutions The University of Hawaii, USA The University of Texas at Dallas, USA Table of Contents Bubblesort and Juggling Sequences................................. 1 Ronald L. Graham A Proof of the Molecular Conjecture ............................... 2 Naoki Katoh Exact Algorithms for Dominating Clique Problems (Extended Abstract) ............................................. 4 N. Bourgeois, F. Della Croce, B. Escoffier, and V.Th. Paschos Enumerating Stereoisomers of Tree Structured Molecules Using Dynamic Programming ........................................... 14 Tomoki Imada, Shunsuke Ota, Hiroshi Nagamochi, and Tatsuya Akutsu Exact Algorithms for the Bottleneck Steiner Tree Problem (Extended Abstract) ............................................. 24 Sang Won Bae, Sunghee Choi, Chunseok Lee, and Shin-ichi Tanigawa Exact Algorithms for Set Multicover and Multiset Multicover Problems ....................................................... 34 Qiang-Sheng Hua, Dongxiao Yu, Francis C.M. Lau, and Yuexuan Wang Practical Discrete Unit Disk Cover Using an Exact Line-Separable Algorithm....................................................... 45 Francisco Claude, Reza Dorrigiv, Stephane Durocher, Robert Fraser, Alejandro L´opez-Ortiz, and Alejandro Salinger Divide-and-Conquer Algorithms for Partitioning Hypergraphs and Submodular Systems ............................................. 55 Kazumasa Okumoto, Takuro Fukunaga, and Hiroshi Nagamochi On Protein Structure Alignment under Distance Constraint ........... 65 Shuai Cheng Li and Yen Kaow Ng A Structural Lemma in 2-DimensionalPacking,and Its Implications on Approximability ................................................. 77 Nikhil Bansal, Alberto Caprara, Klaus Jansen, Lars Pr¨adel, and Maxim Sviridenko Max-Coloring Paths: Tight Bounds and Extensions................... 87 Telikepalli Kavitha and Julia´n Mestre XII Table of Contents Fr´echet Distance Problems in Weighted Regions ..................... 97 Yam Ki Cheung and Ovidiu Daescu The Complexity of Solving Stochastic Games on Graphs .............. 112 Daniel Andersson and Peter Bro Miltersen Computational Complexity of Cast Puzzles.......................... 122 Chuzo Iwamoto, Kento Sasaki, Kenji Nishio, and Kenichi Morita New Bounds on the Average Distance from the Fermat-Weber Center of a Planar Convex Body ......................................... 132 Adrian Dumitrescu and Csaba D. T´oth Reconstructing Numbers from Pairwise Function Values .............. 142 Shiteng Chen, Zhiyi Huang, and Sampath Kannan Hilbert’s Thirteenth Problem and Circuit Complexity ................ 153 Kristoffer Arnsfelt Hansen, Oded Lachish, and Peter Bro Miltersen Interval Stabbing Problems in Small Integer Ranges.................. 163 Jens M. Schmidt Online Sorted Range Reporting.................................... 173 Gerth Stølting Brodal, Rolf Fagerberg, Mark Greve, and Alejandro L´opez-Ortiz Data Structures for Approximate Orthogonal Range Counting ......... 183 Yakov Nekrich Dynamic 3-Sided Planar Range Queries with Expected Doubly Logarithmic Time................................................ 193 Gerth Stølting Brodal, Alexis C. Kaporis, Spyros Sioutas, Konstantinos Tsakalidis, and Kostas Tsichlas Untangled Monotonic Chains and Adaptive Range Search............. 203 Diego Arroyuelo, Francisco Claude, Reza Dorrigiv, Stephane Durocher, Meng He, Alejandro Lo´pez-Ortiz, J. Ian Munro, Patrick K. Nicholson, Alejandro Salinger, and Matthew Skala Geodesic Spanners on Polyhedral Surfaces........................... 213 Sanjiv Kapoor and Xiang-Yang Li Approximating Points by a Piecewise Linear Function: I.............. 224 Danny Z. Chen and Haitao Wang Approximating Points by a Piecewise Linear Function: II. Dealing with Outliers ........................................................ 234 Danny Z. Chen and Haitao Wang
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