ARTICLEADDENDUM Communicative&IntegrativeBiology5:2,203–205;March/April2012;G2012LandesBioscience Yeast biofilm colony as an orchestrated multicellular organism Vratislav Št’ovíček,1 Libuše Váchová1,2 and Zdena Palková1,* 1DepartmentofGeneticsandMicrobiology;FacultyofScience;CharlesUniversityinPrague;Prague,CzechRepublic;2InstituteofMicrobiologyASCR; Prague,CzechRepublic Although still often considered as differentiated cell subpopulations and simple unicellular organisms, in also possesses a significant resistance to natural settings yeast cells tend to environmental impacts. Pathogenic yeasts organize into intricate multicellular com- (i.e., of Candida sp.) can colonise various munities.Duetospecificmechanismsonly surfaceswithinthehumanbody,including feasible at the population level, their host tissues and artificial medical devices, capacityforsocialbehaviorisadvantageous and form biofilms that resist otherwise for their survival in a harmful environ- effective drug therapy. Biofilms are thus ment.FeralSaccharomycescerevisiaestrains very difficult to eliminate and serve as a form complex structured colonies, which source of serious systemic infections.6,7 display many properties typical of natural The questions of how yeast multicellular biofilms causing (among others) serious populations orchestrate their development infections in the human body. In our and how they achieve their environmental recent paper, we looked inside a growing protection are therefore also important in colony using two-photon confocal micro- terms of medical care. However, as it is scopy. This allowed us to elucidate its difficult to grow artificial biofilms in the three-dimensional colony architecture and laboratory that have properties similar to some mechanisms responsible for com- those of fully developed natural biofilms, munity protection. Moreover, we showed manyaspects ofbiofilmformation arestill how particular protective mechanisms rather elusive. complement each other during colony Single cells of feral S. cerevisiae strains development and how each of them plated on solid medium retain the ability contributes to its defense against attacks to develop into structured colonies with from the environment. Our findings typical “fluffy” morphology3,8 within a broaden current understanding of micro- coupleofdaysofgrowth.Asshownbelow, bial multicellularity in general and also such colonies share many properties with shednewlightontheenormousresistance natural biofilms, and we therefore call Keywords: structured colony, ofyeastbiofilms. thembiofilmcolonies.Thebiofilmcolony Saccharomyces cerevisiae, feral strains, model enabled us to discover the spatio- biofilm, drug efflux pumps, temporal localization of specific cell sub- extracellular matrix Microbial multicellular communities can populations with different functions and Submitted: 11/30/11 be found in various (even extreme) determine their impact on the protection Accepted: 12/01/11 environments in the wild.1 Yeast cells can and survival of the whole colony. form diverse structures when attached to After relatively few cell divisions occur http://dx.doi.org/10.4161/cib.18912 solid surfaces (e.g., biofilms,2 colonies3), and a simple mound colony is formed, *Correspondenceto:ZdenaPalková; when growing at a liquid/air interface particular cell subpopulations begin to Email:[email protected] (e.g., cell films on the surface of sherry diverge and play different roles. Cells at wine that are called “flors”4) or when they the colony base form elongatedcell chains Addendumto:VáchováL,StovícekV,HlavácekO, ChernyavskiyO,StĕpánekL,KubínováL,etal. mutually interact in a liquid environment called pseudohyphae.9 These filaments Flo11p,drugeffluxpumps,andtheextracellular and form cell clumps called “flocs”5. Each invade the agar medium, anchoring the matrixcooperatetoformbiofilmyeastcolonies.J of these structures possesses some level structure to the solid substrate. Cells in CellBiol2011;194:679–87;PMID:21875945; of internal cell organization and comple- peripheral layers surrounding the entire http://dx.doi.org/10.1083/jcb.201103129 xity connected with the formation of colony (including subsurface parts) are www.landesbioscience.com Communicative&IntegrativeBiology 203 Figure1.InternalstructureofcolonyofferalSaccharomycescerevisiaestrain.Thirty-sixh-old(left)and72h-old(right)colony.Boxesinverticalcolony cross-sectionssummarizestructureandfunctionofcellsubpopulationsinupperaerialandbottomsubsurfacecolonyparts;thelocalizationofdividing, non-dividingandstationarycellsisdepicted,aswellascellswithactivedrugeffluxpumpsPdr5pandSnq2p.ThepresenceofECMismarkedwith blacklinehatching.Flo11p-dependentfibersinterconnectcellsinbothaerialandsubsurfacecolonyparts. equipped with drug-efflux pumps (Pdr5p biofilms and planktonic cells,11,12 without biofilms.2,13,14 Despite the sequestration and Snq2p) localized to the plasma mem- more detailed information on the trans- potential of the ECM in clinical biofilms brane, the expression of which is con- porter’s function over the course of being implied,15,16 its contribution to bio- trolled by Pdr1p together with another, community development. In addition to film resistance is unclear and sometimes as yet unidentified transcription factor the presence of these pumps, cells at the evendoubted.7,17Asacolonydevelops,the (Fig.1). These proteins that belong to surfacelayersoftheaerialcolonypartenter area of cells embedded in ECM expands the family of pleiotropic drug resistance the stationary phase and thus become (Fig.1); in later stages, the ECM encloses membrane transporters are capable of more resistant to potential environmental almost all colony cells. Complementarily, removing various (including toxic) sub- stress (Fig.1). Meanwhile, cells in inter- the layer of cells containing functional stances from the cells10 and protect them nal colony areas start to produce extra- drug-effluxpumpssurroundingthecolony (and thus also the whole colony) against cellularpolymericmatrix(ECM; Fig.1)of becomes thinner as the transporters are external attacks. It has been demonstrated unknown composition and thus become degraded (Fig.1) and almost completely that various drug-efflux pumps play a fully embedded in this matrix. The ECM disappears in an older, fully developed role in yeast biofilm resistance against apparently adopts the role of a protective colony.Onlythetipsofthepseudohyphae extracellularly added toxic compounds. barrier, because it blocks the penetration in the agar not covered with ECM still However, this has usually been based on of even harmful compounds. ECM is one maintain functional drug efflux pumps on the overall change in behavior of mutated of the defining components of many the membrane, thus enabling the active strains or expression differences between yeast multicellular communities including defense of these exposed cells. 204 Communicative&IntegrativeBiology Volume5Issue2 From the early developmental stage areobservedthroughouttheentirecolony, colonies expanding predominantly in the (34–42 h), a cell-free cavity in the colony including subsurface filamentous cells horizontaldirection.3,8,22Cellswithinsuch interior is formed. As the timing of its invading the agar (Fig.1). Cell-cell and colonies are tightly packed and neither formation correlates with the appearance cell-substrate adhesion is another feature pores nor cavities can be observed.3,22 In of ECM, we can speculate that the cavity typical of multicellular communities18,19 contrast, the strategy of feral strains is to couldbefilledwithECM.TheECMmay and is often ascribed as a function of cell quickly occupy territory ahead of com- also be involved in the storage of water wall adhesive proteins, including the FLO petitors, to build a complex structure and possibly nutrients, as the extracellular familyofS.cerevisiae.19,20Frommutantsin protected by several cooperating mecha- material isolated from colonies possesses a individual FLO genes, only those lacking nismssoastoprovideashelteredspacefor high water retention capacity.8 Moreover, FLO11areunabletodevelopa3Dcolony new cell generations. Despite the high it may provide a porous nutrient-rich architecture and they form smooth and energy costs, it is advantageous to build spacefordividingcellsinthecolonyinter- flat colonies.8,21 Dflo11 colonies also lack such a complicated structure, because it ior. Together with the division of internal intercellular connections, suggesting that enables the community to effectively cope cells, site-specific ECM production and Flo11p has a unique function in the for- with a hostile environment. Thus, a its subsequent swelling can lead to rapid mationoffibrouscell-cellinterconnections structured biofilm yeast colony should be colony expansion in both the horizontal in biofilm colonies. considered to be a multicellular organism, andverticaldirection.Asaresult,theaerial In plentiful and stable laboratory con- where everything is subordinated to the surface layer undulates and forms ridges ditions, colonies no longer need the traits success of the community, regardless of containingothercavities,givingthecolony described above. They are therefore individual cell fate. its typical “fluffy” appearance. switched off and energy, otherwise con- In addition to ECM that may provide sumed in e.g., the production of an ECM Acknowledgments stability to the 3-D colony structure, the rich in polysaccharides, could be used in This work was supported by the Grant flexibility and undulation of the surface a more profitable way.1 Thus, laboratory Agency of the Czech Republic 204/08/ colony layer could be dependent on the and domesticated strains (those arising 0718 and the Ministry of Education presence of fibrous interconnections after passages of feral strains on complex LC531, LC06063; MSM0021620858 between the cells. These interconnections media)3 form non-adhesive, smooth flat and AV0Z50200510. References 10. Wolfger H, Mamnun YM, Kuchler K. Fungal ABC 17. Nobile CJ, Mitchell AP. Genetics and genomics of proteins:pleiotropicdrugresistance,stressresponseand Candida albicans biofilm formation. Cell Microbiol 1. 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