Translational Genomics for Crop Breeding: Volume 2 - Improvement for Abiotic Stress, Quality and Yield Improvement

276 Pages·2013·20.3 MB·English

by  Rajeev Varshney

Translational Genomics for Crop Breeding,
Volume II: Abiotic Stress, Yield and Quality

Translational Genomics for
Crop Breeding,
Volume II: Abiotic Stress,
Yield and Quality
Edited by
Rajeev K. Varshney
Roberto Tuberosa
Thiseditionfirstpublished2013(cid:2)C 2013byJohnWiley&Sons,Inc.
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LibraryofCongressCataloging-in-PublicationData
Translationalgenomicsforcropbreeding.VolumeII:abioticstress,yieldandquality/editedbyRajeevK.Varshneyand
RobertoTuberosa.
p.cm.
Includesbibliographicalreferencesandindex.
ISBN978-0-470-96291-6(cloth:alk.paper)–ISBN978-1-118-72837-6(epub)–ISBN978-1-118-72842-0(emobi)–
ISBN978-1-118-72848-2(ebook)–ISBN978-1-118-72862-8(epdf) 1.Crops–Geneticengineering. 2.Plant
breeding. 3.Plantgenomemapping. 4.Cropimprovement. I.Varshney,R.K.(RajeevK.),1973– II.Tuberosa,R.
(Roberto)
SB123.57.T742013
631.5(cid:3)3–dc23
2013029686
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1 2013
Contents
Foreword vii
Preface ix
Chapter1 TranslationalGenomicsforCropBreeding:AbioticStressTolerance,Yield,
andQuality,AnIntroduction 1
RajeevK.VarshneyandRobertoTuberosa
Chapter2 ApplyingGenomicsToolsforBreedingSubmergenceToleranceinRice 9
EndangM.Septiningsih,BertrandC.Y.Collard,SigridHeuer,
JuliaBailey-Serres,AbdelbagiM.Ismail,andDavidJ.Mackill
Chapter3 GenomicsApplicationstoSalinityToleranceBreedinginRice 31
J.DamienPlatten,MichaelJ.Thomson,andAbdelbagiM.Ismail
Chapter4 Marker-AssistedIntrogressionofMajorQTLsforGrainYieldUnder
DroughtinRice 47
ArvindKumar,ShalabhDixit,andAmeliaHenry
Chapter5 MolecularBreedingforPhosphorus-efficientRice 65
SigridHeuer,J.H.Chin,R.Gamuyao,S.M.Haefele,andM.Wissuwa
Chapter6 AluminumToleranceinSorghumandMaize 83
JurandirV.Magalhaes,LyzaG.Maron,MiguelA.Pin˜eros,
ClaudiaT.Guimara˜es,andLeonV.Kochian
Chapter7 FreezingToleranceintheTriticeae 99
GalibaGabor,EricJ.Stockinger,EnricoFrancia,JustynaMilc,GaborKocsy,
andNicolaPecchioni
Chapter8 MolecularBreedingforStay-Green:ProgressandChallengesinSorghum 125
VincentVadez,SantoshDeshpande,JanaKholova,PunnaRamu,
andC.TomHash
Chapter9 GeneticImprovementofGrainQualityinJaponicaRice 143
KiyosumiHoriandMasahiroYano
Chapter10 BiofortifiedMaize–AGeneticAvenueforNutritionalSecurity 161
RamanBabu,NataliaPalacios,andBMPrasanna
v
vi CONTENTS
Chapter11 Marker-AssistedBackcrossingSelectionforHighO/LRatioin
CultivatedPeanut 177
PadmalathaKoilkonda,ChikaraKuwata,MasanobuFukami,KentaShirasawa,
KohAoki,SatoshiTabata,MakotoHasegawa,HiroyukiKiyoshima,
ShigeruSuzuki,ShigemiSasamoto,AtsushiKurabayashi,HisanoTsuruoka,
TsuyukoWada,andSachikoIsobe
Chapter12 Genomics-AssistedBreedingforTomatoFruitQualityintheNext-Generation
OmicsAge 193
MatthewP.KinkadeandMajidR.Foolad
Chapter13 ImprovementofYieldperseinSugarcane 211
M.Gouy,S.Nibouche,J.Y.Hoarau,andL.Costet
AppendixI–Contributors 239
AppendixII–Reviewers 243
Index 245
Colorplatesectioncanbefoundbetweenpages82and83.
Foreword
ICRISAT’smissionistoreducepoverty,hunger, chickpea, pigeonpea, tomato, and so on is now
malnutrition, and environmental degradation in availabletoenablegreaterunderstandingoftraits
thedrylandtropics.Toaccomplishthis,weneed through comparative studies. It is important to
to address the challenges presented by popu- further translate available genome information
lation explosion and climate change and their in crop breeding so that farming communities
impactsonagriculture. willbebenefittedsoonerthanlater.
Today about 70% of the food-insecure pop- Translational Genomics for Crop Breeding:
ulation lives in developing countries, mostly as Abiotic Stress, Yield and Quality, edited by Dr.
small-scale and subsistence farmers, and their Rajeev K. Varshney, our own ICRISAT scien-
populationgrowthisexpectedtotripleby2100. tist, and Professor Roberto Tuberosa from the
Theyekeoutalivingandfeedthemselvesfrom UniversityofBologna,Italy,providesaconcrete
food crops cultivated in degraded lands in an stepinthisdirection.Itisthesecondoftwovol-
unequivocallywarmerclimatesystem. umes where the eminent editors have carefully
To achieve global food security, the devel- selectedauthorswhoareexpertsintranslational
opment of crop varieties that produce high genomicsincropbreedingfordifferenttraitsin
yields in harsh climatic conditions will be a differentcropspeciestowritethevariouschap-
key strategy. Although several desirable traits ters of this publication. These chapters provide
have been developed in crop species through examples oftranslationalgenomics forenhanc-
integratedbreedingpractices,self-sufficiencyin ingtolerancetoabioticstressesandqualitytraits
foodgrainsandlegumespersehasremainedan inanumberofcrops.Ibelievethatsuchabookis
elusivedreamforpoorpeopleinthedeveloping verytimely,informative,andofsuchqualitythat
world. it will fill the gap that exists presently between
The knowledge generated through advances genomescienceandcropbreeding.
in genomics during the past two decades has Throughthispublication,wehopetheelusive
enormous potential in advancing the quest for dream of poor people in the developing world
abioticstress–tolerantcropsinthearidandsemi- willsoonerbecomeareality.
aridregionsoftheworld.Moreover,DNA-based
marker technologies have increased the preci-
sioninmarker-assistedselection(MAS),thereby
reducing the time for improving traits of inter- Hyderabad WilliamD.Dar
est. Genome sequence information for impor- Date:June10,2013 DirectorGeneral,
tant crops like rice, sorghum, maize, soybean, ICRISAT
vii