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The model legume Medicago truncatula I PDF

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VOLUME I THE MODEL LEGUME MEDICAGO TRUNCATULA FRANS J. DE BRUIJN EDITED BY VOLUME II THE MODEL LEGUME MEDICAGO TRUNCATULA FRANS J. DE BRUIJN EDITED BY JWST955-Halftitle1 JWST955-de-Brujin September5,2019 8:13 PrinterName: Trim:279mm×216mm The model legume Medicago truncatula Volume I JWST955-Halftitle1 JWST955-de-Brujin September5,2019 8:13 PrinterName: Trim:279mm×216mm JWST955-titleVolume1 JWST955-de-Brujin September5,2019 8:21 PrinterName: Trim:279mm×216mm The model legume Medicago truncatula Volume I Editedby Frans J. de Bruijn LaboratoiredesInteractionsPlantesMicro-organismes(LIPM), CentreINRAOccitanie-Toulouse,Auzeville, 31326Castanet-TolosanCedex,France JWST955-CopyrightVol1 JWST955-de-Brujin September9,2019 9:25 PrinterName: Trim:279mm×216mm Thiseditionfirstpublished2020 ©2020JohnWileyandSons,Inc. Allrightsreserved.Nopartofthispublicationmaybereproduced,storedinaretrievalsystem,ortransmitted,inanyformorbyany means,electronic,mechanical,photocopying,recordingorotherwise,exceptaspermittedbylaw.Adviceonhowtoobtain permissiontoreusematerialfromthistitleisavailableathttp://www.wiley.com/go/permissions. TherightofFransJ.deBruijntobeidentifiedastheauthoroftheeditorialmaterialinthisworkhasbeenassertedinaccordance withlaw. RegisteredOffice JohnWiley&Sons,Inc.,111RiverStreet,Hoboken,NJ07030,USA EditorialOffice Boschstr.12,69469Weinheim,Germany Fordetailsofourglobaleditorialoffices,customerservices,andmoreinformationaboutWileyproductsvisitusatwww.wiley.com. Wileyalsopublishesitsbooksinavarietyofelectronicformatsandbyprint-on-demand.Somecontentthatappearsinstandardprint versionsofthisbookmaynotbeavailableinotherformats. LimitofLiability/DisclaimerofWarranty Whilethepublisherandauthorshaveusedtheirbesteffortsinpreparingthiswork,theymakenorepresentationsorwarrantieswith respecttotheaccuracyorcompletenessofthecontentsofthisworkandspecificallydisclaimallwarranties,includingwithout limitationanyimpliedwarrantiesofmerchantabilityorfitnessforaparticularpurpose.Nowarrantymaybecreatedorextendedby salesrepresentatives,writtensalesmaterialsorpromotionalstatementsforthiswork.Thefactthatanorganization,website,or productisreferredtointhisworkasacitationand/orpotentialsourceoffurtherinformationdoesnotmeanthatthepublisherand authorsendorsetheinformationorservicestheorganization,website,orproductmayprovideorrecommendationsitmaymake. Thisworkissoldwiththeunderstandingthatthepublisherisnotengagedinrenderingprofessionalservices.Theadviceand strategiescontainedhereinmaynotbesuitableforyoursituation.Youshouldconsultwithaspecialistwhereappropriate.Further, readersshouldbeawarethatwebsiteslistedinthisworkmayhavechangedordisappearedbetweenwhenthisworkwaswrittenand whenitisread.Neitherthepublishernorauthorsshallbeliableforanylossofprofitoranyothercommercialdamages,includingbut notlimitedtospecial,incidental,consequential,orotherdamages. LibraryofCongressCataloging-in-PublicationData Names:Bruijn,F.J.de(FransJ.de),editor. Title:ThemodellegumeMedicagotruncatula/FransJ.deBruijn. Description:Hoboken:NewJerseyJohnWiley&Sons,[2020]|Includesbibliographicalreferencesandindex. Identifiers:LCCN2019023515(print)|LCCN2019023516(ebook)|ISBN9781119409168(cloth)| ISBN9781119409175(adobepdf)|ISBN9781119409151(epub) Subjects:LCSH:Genomics.|Legumes–MediterraneanRegion.|Legumes–Research–MediterraneanRegion. Classification:LCCQH447.M59452020(print)|LCCQH447(ebook)|DDC572.8/6–dc23 LCrecordavailableathttps://lccn.loc.gov/2019023515 LCebookrecordavailableathttps://lccn.loc.gov/2019023516 Coverimage:PhotographtakenbyBettinaHause,Halle,Germany CoverdesignbyWiley Setin9.5/12ptMinionProbyAptaraInc.,NewDelhi,India 10 9 8 7 6 5 4 3 2 1 JWST955-dedication JWST955-de-Brujin September4,2019 14:56 PrinterName: Trim:279mm×216mm Thisworkisdedicatedtomytwodaughters,WaverlyAnndeBruijn-KlawandVanessade Bruijn-Minafortheirloveandsupportandinterestevenfromadistance,andtomygrandchildren Elizabeth(Izzy),Ethan,andElliott,andtomybelovedlatewifeCathySenta-LoysdeBruijnforher loveandunderstandingduringtheearlyeditingofthisbook. JWST955-dedication JWST955-de-Brujin September4,2019 14:56 PrinterName: Trim:279mm×216mm JWST955-toc JWST955-de-Brujin September12,2019 14:25 PrinterName: Trim:279mm×216mm Contents VOLUME I 3.1.4 Embryodevelopmentandtheoilandprotein bodiesinMedicagotruncatula,71 Preface,xv YouhongSong,Xin-DingWang,NathanSmith, Acknowledgments,xvi SimonWheeler,andRayJ.Rose Listofcontributors,xvii 3.1.5 RoleofthioredoxinsandNADP-thioredoxin reductasesinlegumeseedsandseedlings,80 Section1 Fran¸coiseMontrichard,PierreFrendo, PascalRey,andBobBuchanan 1.1 Generalintroduction,3 FransJ.deBruijn 3.1.6 Seedshapequantificationinthemodel legumes:methodsandapplications,92 Section2: Overviewchapters,7 EmilioCervantes,EzzeddineSaadaoui, A´ngelTocino,andJose´JavierMart´ınGo´mez 2.1 Asnapshotoffunctionalgeneticstudiesin Medicagotruncatula,9 3.1.7 Theunderlyingprocessesgoverningseedsize YunKang,MinguyeLi,SenjutiSinharoy, plasticity:impactofendoploidyonseedcoat andJeromeVerdier developmentandcellexpansioninMedicago truncatula,99 2.2 Medicagotruncatulaasanecological, S.OchattandM.Abirached-Darmency evolutionary,andforagelegumemodel:new directionsforward,31 3.2 Rootdevelopment:introduction,117 EricJ.B.vonWettberg,JayantiMuhkerjee, FransJ.deBruijn KenMoriuchi,andStephanieS.Porter 3.2.1 Nitratesignalingpathwayviathetransporter MtNPF6.8involvesabscisicacidforthe Section3: Medicagotruncatulaplant regulationofprimaryrootelongationin development,41 Medicagotruncatula,118 3.1 Seeddevelopment:introduction,43 AnisM.LimamiandMarie-ChristineMore`re FransJ.deBruijn LePaven 3.1.1 Aphysiologicalperspectiveoflatematuration 3.2.2 SCARECROWandSHORT-ROOTshowan processesandestablishmentofseedqualityin overlappingexpressionpatterninthe Medicagotruncatulaseeds,44 Medicagotruncatulanodulecentralmeristem,125 JeromeVerdier,OlivierLeprince, HenkJ.Franssen,OlgaKulikova,XiWan, andJuliaBuitink AukeAdams,andRenzeHeidstra 3.1.2 Medicagotruncatula,aninformativemodelto 3.2.3 Lateralrootformationandpatterningin investigatetheDNAdamageresponseduring Medicagotruncatula,130 seedgermination,55 SandraBensmihen AncaMacovei,AndreaPagano,ChiaraForti, 3.2.4 Modulationofrootelongationbyabscisicacid SusanaArau´jo,andAlmaBalestrazzi andLATERALROOTORGANDEFECTIVE/ 3.1.3 TranscriptionalnetworksinearlyMedicago NUMEROUSINFECTIONSAND truncatulaembryodevelopment,61 POLYPHENOLICSviareactiveoxygen RayJ.Rose speciesinMedicagotruncatula,136 JeanneM.HarrisandChangZhang vii JWST955-toc JWST955-de-Brujin September12,2019 14:25 PrinterName: Trim:279mm×216mm viii Contents 3.2.5 FYVEandPHproteindomainspresentin Section5: StressandMedicagotruncatula,237 MtZR1,aPRAFprotein,modulatethe 5.1 Abioticstress:introduction,239 developmentofrootsandsymbioticroot FransJ.deBruijn nodulesofMedicagotruncatulaviapotential phospholipidssignaling,144 5.1.1 Genomicandtranscriptomicbasisofsalinity JulieHopkins,OlivierPierre,PierreFrendo, adaptationandtransgenerationalplasticity andEricBoncompagni inMedicagotruncatula,240 MarenL.Friesen 3.3 Leafdevelopment:introduction,153 FransJ.deBruijn 5.1.2 Isolationandfunctionalcharacterizationof salt-stressinducedRCI2-likegenesfrom 3.3.1 CompoundleafdevelopmentinMedicago MedicagosativaandMedicagotruncatula,243 truncatula,154 RuicaiLong,FanZhang,TiejunZhang, RujinChen JunmeiKang,andQingchuanYang 3.3.2 MechanisticinsightsintoSTENOFOLIA- 5.1.3 Rhizobialsymbiosisinfluencesresponseto mediatedleafbladeoutgrowthinMedicago earlysaltanddroughtstressoftheMedicago truncatula,173 truncatularootproteome,253 FeiZhang,HuiWang,andMillionTadege ReinhardTuretschek,ChristianaStaudinger, 3.4 Flowerdevelopment:introduction,181 andStefanieWienkoop FransJ.deBruijn 5.1.4 Decipheringtheroleofthealternative 3.4.1 Geneticcontroloffloweringtimeinlegumes,182 respirationundersaltstressinMedicago JamesL.Weller,RichardC.Macknight truncatula,261 NestorFDel-Saz,FranciscoPalma, 3.4.2 Forwardandreversescreenstoidentifygenes JoseAntonioHerrera-Cervera,and thatcontrolvernalizationandfloweringtime MiquelRibas-Carbo inMedicagotruncatula,189 MaurenJaudal,GeoffreyThomson, 5.1.5 Effectofarseniconlegumes:analysisinthe LuluZhang,ChongChe,JiangqiWen, modelMedicagotruncatula–Ensifer KirankumarS.Mysore,MillionTadege, interaction,268 andJoannaPutterill Elo´ısaPajuelo,IgnacioD.Rodr´ıguez-Llorente, andMiguelA.Caviedes 3.4.3 MtNAMregulatesfloralorganidentityand lateralorganseparationinMedicago 5.1.6 Dualoxidativestresscontrolinvolving truncatula,197 antioxidantdefensesystemandalternative XiaofeiCheng,JianlingPeng,RujinChen, oxidasepathwayswithinthemodellegume KirankumarS.Mysore,andJiangqiWen Medicagotruncatulaunderbioticandabiotic constraints,281 Section4: Biosynthesisofnaturalproducts: HaythemMhadhbi introduction,207 Section5.2: Bioticstress:interactionofMedicago 4.1 Organizationandregulationoftriterpene truncatulawithpathogensandpests,289 saponinbiosynthesisinMedicagotruncatula,209 JanMertensandAlainGoossens 5.2.1 Interactionwithrootandfoliar pathogens:introduction,291 4.2 SaponinsinMedicagotruncatula:structures FransJ.deBruijn andactivities,220 CatherineSivignon,IsabelleRahioui, 5.2.1.1 Medicagotruncatulaandotherannual andPedrodaSilva Medicagospp.–interactionswithrootand foliarfungal,oomycete,andviralpathogens,293 4.3 SaponinsynthesisinMedicagotruncatula MartinJ.Barbetti,MingPeiYou, plants:CYP450-mediatedformationof andRogerA.C.Jones sapogeninsinthedifferentplantorgans,225 MariaCarelli,MassimoConfalonieri, 5.2.1.2 Decipheringresistancemechanismstothe AldoTava,ElisaBiazzi,OrnellaCalderini, rootrotdiseaseoflegumescausedby PamelaAbbruscato,MariaCammareri, AphanomyceseuteicheswithMedicago andCarlaScotti truncatulageneticandgenomicresources,307 ChristopheJacquetandMaximeBonhomme

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