ThisarticleisaPlantCellAdvanceOnlinePublication.Thedateofitsfirstappearanceonlineistheofficialdateofpublication.Thearticlehasbeen editedandtheauthorshavecorrectedproofs,butminorchangescouldbemadebeforethefinalversionispublished.Postingthisversiononline reducesthetimetopublicationbyseveralweeks. REVIEW The Angiosperm Gibberellin-GID1-DELLA Growth Regulatory Mechanism: How an “Inhibitor of an Inhibitor” Enables Flexible Response to Fluctuating Environments NicholasP.Harberd,1EricBelfield,andYukiYasumura DepartmentofPlantSciences,UniversityofOxford,OxfordOX13RB,UnitedKingdom Thephytohormonegibberellin(GA)haslongbeenknowntoregulatethegrowth,development,andlifecycleprogressionof flowering plants. However, the molecular GA-GID1-DELLA mechanism that enables plants to respond to GA has only recentlybeendiscovered.Inaddition,studiespublishedinthelastfewyearshavehighlightedpreviouslyunsuspectedroles for the GA-GID1-DELLA mechanism in regulating growth response to environmental variables. Here, we review these advances within a general plant biology context and speculate on the answers to some remaining questions. We also discussthehypothesisthattheGA-GID1-DELLAmechanismenablesfloweringplantstomaintaintransientgrowtharrest, givingthemtheflexibilitytosurviveperiodsofadversity. INTRODUCTION thatreducetheactivityofGAbiosynthesisenzymes(Yamaguchi, 2008). The gibberellins (GAs) are diterpenoid compounds found in The molecular characterization of various GA response mu- plants,fungi,andbacteria,ofwhichonlyafewactivelyregulate tantsledtothediscoveryoftheGID1andDELLAproteins,key plant growth (are bioactive) (see http://www.plant-hormones. componentsofthemolecularGA-GID1-DELLAmechanismthat info/gibberellins.htm; Figure 1A). There has been much recent enablesplantstorespondtoGA.Here,wetracethehistoryof progressinunderstandingoftheregulationofthebiosynthesis thesediscoveriesanddiscussrecentdevelopmentsthatpointto andinactivationofbioactiveGAs(reviewedinYamaguchi,2008). afundamentalrolefortheGA-GID1-DELLAmechanisminreg- The GAs are derived from a basic diterpenoid carboxylic acid ulatingthegrowthresponseoffloweringplantstoenvironmental skeleton(Figure1A).Amongfeaturescrucialtobioactivityarethe variables. hydroxylgrouponC3andthecarboxylgrouponC6(Figure1A), lackofwhichcauselossofactivity.Inaddition,hydroxylationon C2 causes inactivation and is an important mechanism for GA-OPPOSABLEPLANTGROWTHINHIBITORS growthregulationinangiosperms(Yamaguchi,2008).Theslight structural differences between bioactive and inactive GAs is There are several categories of GA response mutants. Initial indicative of the tight fit of bioactive GAs in a specific pocket interestinsuchmutantswasprovokedbythepossibilitythatthey featureoftheGAreceptor.Thishasimportantimplicationsthat mightprovidecluesastohowplantcellsperceiveandrespondto areexploredfurtherbelow. the GA signal. For example, the phenotype of GA-insensitive The importance of GAs to angiosperm growth regulation is dwarfmutantsisnotrestoredtonormalbyGAtreatments(Figure exemplified by the phenotype of GA-deficient mutants. For 1B). Genetic studies of gibberellic acid-insensitive (gai; Arabi- example, the GA-deficient Arabidopsis thaliana ga1-3 mutant dopsis), D8 (maize [Zea mays]), and Rht-B1b/Rht-D1b (wheat lacks ent-kaurene synthetase A, an enzyme in the GA biosyn- [Triticumaestivum])mutants(Koornneefetal.,1985;Harberdand thesispathway,andthismutantexhibitsacharacteristicsevere Freeling, 1989; Peng and Harberd, 1993; Peng et al., 1997, dwarfphenotype.Inaddition,ga1-3mutantseeddonotgermi- 1999a)identifiedcommonproperties:thevariousmutantalleles nate; ga1-3 mutant shoots bear leaves that are shorter and involvedactinageneticallydominantfashionandencodeactive darker green than the wild type and flower late in long-day (altered function) mutant products that confer dwarfism and photoperiods(andnotatallinshort-dayphotoperiods);andga1-3 reduced GA response. Further groupings of recessive (rather mutantflowersexhibitimpairedpetalandstamendevelopment than dominant) mutations conferring GA-insensitive dwarfism and are male sterile. All of these aspects of the GA-deficient have more recently been characterized (e.g., McGinnis et al., phenotype can be corrected by exogenous GA (reviewed in 2003;Sasakietal.,2003;Ueguchi-Tanakaetal.,2005).Finally, Richardsetal.,2001).Mutantssuchasga1-3areGA-sensitive recessiveslendermutantsexhibitexaggeratedgrowth:talland dwarf mutants (Figure 1B) that are known in a number of slim, they resemble wild-type plants treated with saturating different plant species and typically carry recessive mutations levelsofGAandremaintallevenwhenGAdeficient(e.g.,Potts etal.,1985;Figure1B). [email protected]. Studies of some of the above categories of mutant enabled www.plantcell.org/cgi/doi/10.1105/tpc.109.066969 formal genetic definition of the mechanism via which GA ThePlantCellPreview,www.aspb.orgã2009AmericanSocietyofPlantBiologists 1of12 2of12 ThePlantCell Figure1. GAStructureandResponseMutantCategories. (A)ThestructureofabioactiveGA(GA ),showingcarboxylic(C6)andhydroxyl(C3)groupsthatareessentialforbiologicalactivity,andtheC2site, 4 hydroxylationofwhichabolishesbiologicalactivity. (B)SchematicrepresentationofplantsinGA-relatedmutantcategories.Normal(wildtype)plantsrespondtoexogenousGA(+GA)byincreasedgrowth. GA-sensitivedwarfmutantsareGA-deficient(–GA)andgrowinresponsetoexogenousGA.GA-insensitivedwarfmutantsdonotgrowinresponseto exogenousGA.Finally,slendermutantgrowthmimicsthatofGA-treatednormalplants,evenwhenadditionalmutationsorchemicalgrowthretardants causeGAdeficiency. promotesgrowth,longbeforethemolecularbasisofthismech- MOLECULARDISCOVERYOFGA-OPPOSABLEPLANT anism was apparent. First, analyses of pea (Pisum sativum) GROWTHINHIBITORS:THEDELLAPROTEINS slender mutants led to the proposal that GA works as an DiscoveryofthemolecularidentityoftheendogenousplantGA- “inhibitorofaninhibitor”(Brian,1957).Thisproposalwasbased opposablegrowthinhibitoryfactorresultedfromthemolecular ontheobservationthatslendermutantsgrowtallirrespectiveof cloningofgenesencodingwhatarenowknownastheDELLA GAcontent(e.g.,Pottsetal.,1985).Accordingtotheinhibitorof proteins (or DELLAs), beginning with GAI. The Arabidopsis gai aninhibitorhypothesis,plantscontainanendogenousfactorthat mutationconfersdominant,GA-insensitivedwarfism(Koornneef inhibits growth, and GA promotes growth by overcoming this etal.,1985;PengandHarberd,1993).Aninsertionalmutagen- factor.Lackoftheendogenousgrowth-inhibitingfactorinslen- esisapproachenabledthemolecularcloningofgaiviaisolation dermutantscausesthemtogrowtallevenwhenGAdeficient. Second, genetic analysis of GA-insensitive maize dwarfing ofaDstransposoninactivatedallele(gai-t6;Pengetal.,1997; mutations led to an elaboration of the inhibitor of an inhibitor Figure 2A). Initial analysis of the amino acid sequence of GAI hypothesis.Accordingtothiselaboration,dominantGA-insensitive gave little insight into how this protein might regulate GA re- dwarfingmutationsconfermutantformsofthegrowth-inhibiting sponse.However,approximatelytwo-thirdsoftheGAImolecule factorthatretainthecapacitytoinhibitgrowthbuthavelostthe (attheC-terminalend)wasfoundtoberelatedinsequencetothe capacity to be overcome by GA (Harberd and Freeling, 1989). transcriptional regulator SCARECROW (SCR), suggesting that Thus, the recessive slender versus dominant GA-insensitive GAImightalsobeatranscriptionalregulator(Pengetal.,1997). dwarfmutantscould beseen asopposingmutational faces of MoreintriguingfindingscamefromthecomparisonoftheDNA the same coin: alternative loss-of-function or altered function sequencesoftheGAIandmutantgaialleles.Thiscomparison outcomesofmutationalchangetoanendogenousplantgrowth showedthatthegaiopenreadingframecarriesasmallin-frame inhibitoryfactorwhosemolecularidentityremainedunknown. deletionmutationandthusencodesanalteredproduct,amutant As described below, molecular identification of the genes gaiproteinthatlacksa17–aminoacidsegment(nowknownas affected in GA-insensitive dwarf and slender mutants enabled theDELLAdomain,namedafteritsfirstfiveaminoacids;Peng thediscoveryofthreeofthemajorcomponentsofwhatisnow etal.,1997;Figure2A).Thisfindingwasparticularlysignificant known as the GA-GID1-DELLA mechanism of GA response becauseitidentifiedthemolecularbasisofthealteredfunction regulation:theDELLAgrowthinhibitors;theF-boxproteincom- previouslyascribedtotheproductsofdominantGA-insensitive ponent of an E3 ubiquitin ligase that specifically targets the dwarfingalleles.ItisthelackofafunctionalDELLAdomainingai DELLAsfordestructionintheproteasomeinresponsetoGA;and that causes the reduced GA response of gai mutant plants. theGID1GAreceptor. Further experiments showed that the gai-t6 (loss-of-function) GrowthRegulationbyGA-GID1-DELLA 3of12 Figure2. Wild-TypeandMutantDELLAs. (A) The Arabidopsis mutant gai allele confers dominant GA-insensitive dwarfism and was derived from the wild-type allele (GAI) via irradiation mutagenesis(seeKoornneefetal.,1985;Pengetal.,1997).gaiencodesamutantgaiproteinthatlackstheDELLAdomain(purplesectionintheGAI protein).ItisthelackoftheDELLAdomainthatcausesthealteredfunctionofgai,makingitaconstitutivegrowthinhibitorwhoseactivityisnotopposed byGA.SubsequentDsinsertionmutagenesisexperimentsyieldedthegai-t6allele.ThisknockoutalleledoesnotencodeafunctionalGAI(orgai)protein andconfersatall,slender(PAC-resistant)phenotype. (B)ThemutantmaizeD8-1,D8-2023,andwheatRht-B1bproteinsconferdominantGA-insensitivedwarfism.Themaizeandwheatgenomesencode DELLAproteins(d8andRht-B1a,respectively).MaizemutantallelesencodemutantD8-1(lackstheDELLAdomain,domainI,inpurple),mutantD8- 2023(lackstheTVHYNPSdomain,domainII,inorange),andwheatmutantRht-B1blacksdomainI(seealsoPengetal.,1999a). alleleconferspartialresistancetothedwarfingeffectsoftheGA opposableplantgrowthinhibitors.Forexample,thelackofsuch biosynthesisinhibitorpaclobutrazol(PAC;Pengetal.,1997),a inhibitors would be predicted to suppress the GA-deficient characteristicpropertyofslenderalleles(e.g.,Pottsetal.,1985). mutantphenotypeofga1-3.Accordingly,lackofGAIandRGA Thus, lack of GAI (in gai-t6) causes PAC resistance (slender suppressesthedwarfedshootphenotypenormallyconferredby phenotype), while lack of the DELLA domain (in gai) causes a ga1-3(DillandSun,2001;Kingetal.,2001),lackofRGL2permits constitutively active mutant growth inhibitor (gai) whose geneti- GA-independent germination of ga1-3 seed (Lee et al., 2002; callydominantactioncannolongerbeopposedbyGA(Figure2A). Tyleretal.,2004),whilelackofRGA,RGL1,andRGL2permits ArabidopsisRGAwasidentifiedbyloss-of-functionmutations normalstamenandpetalgrowthinga1-3flowers(Chengetal., conferringpartialsuppressionofthega1-3phenotype(achar- 2004; Tyler et al., 2004). In effect, progressive reduction of acteristic property of slender alleles; Silverstone et al., 1997) DELLAfunctiontendstowardcompletesuppressionofallvisible and shown to encode a protein (RGA) closely related to GAI GA-deficientphenotypesexhibitedbyga1-3(Chengetal.,2004; (Silverstoneetal.,1998).Subsequently,itbecameclearthatthe Tyleretal.,2004).Inaddition,theArabidopsisDELLAsdisplay Arabidopsis genome contains three further GAI/RGA-related both overlapping (e.g., GAI and RGA in stem elongation) and genes: RGL1, RGL2, and RGL3 (e.g., Lee et al., 2002). The relativelydiscrete(e.g.,RGL2inseedgermination)GAresponse geneproductsGAI,RGA,RGL1,RGL2,andRGL3comprisethe regulationfunctions.ThecorrespondencebetweenDELLAsand fullArabidopsiscomplementofwhatarenowknowncollectively theinferredGA-opposablegrowthinhibitorwasconfirmedbythe astheDELLAs. demonstrationthatslendermutantsinspeciesotherthanArabi- Thesefindings,togetherwithfurtheranalysis,confirmedthat dopsis carry loss-of-function mutations in GAI/RGA orthologs theDELLAsareindeedthepreviouslyinferredendogenousGA- (e.g.,Ikedaetal.,2001;Chandleretal.,2002)andthatLaandCry, 4of12 ThePlantCell mutantallelesofwhichconferthepeaslenderphenotypeupon whichtheoriginalinhibitorofaninhibitorhypothesiswasbased (Brian, 1957), correspond to DELLA-encoding genes (Weston etal.,2008). ThemolecularcharacterizationoftheArabidopsisgaimutation highlighted the importance of the DELLA domain (Figure 2A; Peng etal.,1997). Thisimportance was further emphasized in studiesoftheGAinsensitivityofdwarfingmutantsofmaize(D8-1; D8-2023)andwheat(Rht-B1b).Aswithgai,theGAinsensitivityof thesemutantsisconferredbymutantDELLAsthatlackfunctional conserved N-terminal domains, termed DELLA (domain I) or TVHYNPS (domain II) (Figure 2B; Peng et al., 1999a). Further studiesidentifieddomainIordomainIImutationsinGA-insensitive barley(Hordeumvulgare)andrice(Oryzasativa)mutants(Chandler etal., 2002; Asanoetal., 2009). Inaddition,deletionofdomain I of Arabidopsis RGA (as conferred by the rga-D17 transgene) results in a mutant RGA protein (rga-D17) that, similarly to gai, confers GA-insensitive dwarfism (Dill et al., 2001). Thus, in a generalsense,mutationofdomainIorIIofDELLAscanprevent GA opposability and confers GA-insensitive dwarfism. We will returntothebiologicalfunctionsofdomainsIandIIlaterinthis review. The wheat Rht-B1b (and Rht-D1b) alleles are important in modernagriculture,inthattheyconfertheincreasedgrainyields of the green revolution varieties containing them (Peng et al., 1999a). In attempts to further expand the agricultural utility of domainImutantDELLAs,theArabidopsisgaigenewasshownto confer dwarfism when expressed in basmati rice (Peng et al., 1999a; Fu et al., 2001), and a switchable form of gai was developed thatcanbeusedtoinducegrowthrestraint flexibly asandwhenrequired(Ait-alietal.,2003). Figure 3. GA Promotes the Proteasome-Dependent Destruction of Insummary,wild-typeDELLAswereidentifiedasGA-opposable DELLAs. plant growth inhibitors that can be specifically mutated (in (A)GAtreatmentcausesdisappearanceofGFP-RGAfromArabidopsis domainsIand/orII)tobecomegrowthinhibitorsthatareresistant root cell nuclei. Right, GA-treated (4 h) pRGA:GFP-RGA roots; left, to the effects of GA. However, the mechanism via which GA control(seealsoSilverstoneetal.,2001). overcomesthegrowthinhibitoryeffectsofwild-typeDELLAswas (B)SchematicrepresentationoftheDELLA-SCFSLY1/GID2interaction.The unknown. DELLA protein (blue) inhibits growth. GA stimulates an interaction between the DELLA protein and the E3 ubiquitin ligase SCFSLY1/GID2, resulting inpolyubiquitination of DELLA. Polyubiquitination targets the DELLAproteinfordestructionbytheproteasome. GAPROMOTESPROTEASOME-DEPENDENT DESTRUCTIONOFDELLAs HowthendoesGAcausethedisappearanceofDELLAs?One Thestagewasnowsetforin-depthmolecularanalysesofhow possibility was that DELLAs are destroyed by the proteasome GAovercomesthegrowthinhibitingeffectsoftheDELLAs.The (Sullivanetal.,2003).Initialexperimentsshowedthatthespecific first breakthrough came from studies of DELLAs fused to the proteasome inhibitor MG132 inhibits the GA-promoted disap- green fluorescent protein (GFP), in particular GFP-RGA. GFP- pearanceofthebarleyDELLASLN1(Fuetal.,2002).Targetingof RGAwasshowntoaccumulateinrootcellnucleiandtodisap- proteins to the proteasome occurs via polyubiquitination: the pear from those nuclei within a few hours of GA treatment attachmentofapolymericchainconsistingofubiquitinprotein (Silverstoneetal.,2001;Figure3A).Furtherstudiesshowedthat residues.PolyubiquitinationisachievedbyE3ubiquitinligases, GAcausesdisappearanceofcerealDELLAs(e.g.,barleySLN1 amongwhichistheso-calledSCFcomplexclass(Sullivanetal., and rice SLR1; Gubler et al., 2002; Itoh et al., 2002). These 2003).ItistheF-boxproteincomponentoftheSCFcomplexthat observationssuggestthatGAovercomesthegrowthinhibitory provides specificity, with each F-box protein having specific effects of DELLAs by promoting their disappearance. Intrigu- affinityforaparticularsetoftargetproteins.Interactionbetween ingly, GA does not promote the disappearance of DELLA pro- SCF and the target protein promotes polyubiquitination and teins lacking domain I (Dill et al., 2001; Fu et al., 2004), thus subsequent destruction of the target by the proteasome. Mo- showing that these mutant proteins, whose growth-inhibiting leculargeneticanalysisofGA-insensitivedwarfmutantsidenti- propertiesareresistanttoGA,arealsoresistanttoGA-promoted fiedanF-boxprotein(riceGID2/ArabidopsisSLY1)thatispartof disappearance. a DELLA-interacting E3 ubiquitin ligase that interacts with a GrowthRegulationbyGA-GID1-DELLA 5of12 C-terminal region oftheDELLA protein(McGinnisetal.,2003; ing,resultingintightspecificityoffitofbioactiveGAwithinthe Sasaki et al., 2003; Dill et al., 2004; Fu et al., 2004) and that pocket.Forexample,theC3-hydroxylgroup(Figure1A),whichis targetsDELLAsfordestructionbytheproteasome(Figure3B). essential for GA activity, is hydrogen bonded to a specific Tyr Thesediscoveriesenabledamolecularunderstandingofhow residueintheinternalsurfaceoftheGID1pocketviaabridging GAovercomesDELLAfunctionandhencepromotesgrowth:the water molecule (Murase et al., 2008; Shimada et al., 2008). growth-inhibiting DELLAs are targeted for destruction by the Conversely,additionofa2-hydroxylgroup,aninplantamech- proteasomeinresponsetoGAfollowingpolyubiquitinationbya anism for the inactivation of bioactive GAs in angiosperms specificE3ubiquitinligaseoftheSCFclass(SCFSLY1/GID2),thus (Yamaguchi, 2008), is predicted to cause steric interference relieving DELLA-mediated growth inhibition. Nevertheless, the andconformationalchangesthatwillnotfavorreceptorbinding questionofhowGApromotestheDELLA-SCFSLY1/GID2interac- (Muraseetal.,2008). tion remained, and it was only with the discovery of the GA Binding of GA causes an allosteric change to GID1, which receptorthatitbecameclearhowthisoccurs. resultsintheNterminusformingalidtothepocket(Muraseetal., 2008; Shimada et al., 2008). Once in place, the upper surface of the lid binds with the DELLA protein, specifically with the N-terminal region defined by domains I and II (Murase et al., THEGARECEPTORINTERACTSWITHDOMAINSIANDII 2008).TheformationoftheGA-GID1-DELLAcomplexisthought OFTHEDELLAPROTEIN toinduceaconformationalchangeinaC-terminaldomainofthe ThediscoveryoftheGAreceptor(Ueguchi-Tanakaetal.,2005) DELLA protein that stimulates substrate recognition by the wasamajoradvanceinunderstandingoftheGA-GID1-DELLA SCFSLY1/GID2 E3 ubiquitin ligase, proteasomic destruction of mechanism. A rice gene (GID1) initially identified by loss-of- DELLA,andtheconsequentpromotionofgrowth. function gid1 alleles (conferring GA-insensitive dwarfism) was IntriguingrecentevidencesuggeststhatovercomingDELLA- showntoencodeanuclearGAreceptorprotein(GID1;Ueguchi- mediated growth inhibition does not equate solely with the Tanakaetal.,2005).GID1islocalized(atleastpredominantly)in destructionofDELLA.Experimentsusingmutantplantslacking thenucleusandactsthereasasolubleGAreceptor,havinghigh the F-box component of the SCFSLY1/GID2 E3 ubiquitin ligase affinity for bioactive GAs and low or nonexistent affinity for have indicated that the GA-dependent formation of the GID1- inactiveGAs.Remarkably,GID1bindsspecificallywiththerice DELLA complex itself (independently of subsequent protein DELLASLR1whenbothproteinsareexpressedinyeastinthe destruction) reduces the growth-repressing effects of the presenceofbioactiveGA.UnlikethecaseinArabidopsis,whose DELLAs (Ariizumi et al., 2008; Ueguchi-Tanaka et al., 2008). genome encodes multiple DELLAs, SLR1 is the sole DELLA Given that DELLAs inhibit growth by interacting with specific proteinencodedbythericegenome.Accordingly,lackofSLR1 growth-promoting transcription factors (see below), it is likely (in a slr1-1 loss-of-function mutant) suppresses the dwarfism that formation of the GID1-DELLA complex reduces the avail- conferredbyagid1loss-of-functionallele,andSLR1accumu- abilityofDELLAsforinteractionwiththosetranscriptionfactors, latesinthegid1-1loss-of-functionmutant.Takentogether,these thusreducingthe resultantgrowthinhibitory effects.Thus, the observationssuggestedthatGApotentiatesaninplantainter- GA-stimulated GID1–DELLA interaction inherently reduces actionbetweentheGID1GAreceptorandDELLAsandthatthis DELLA-mediated growth repression as well as stimulating interactionstimulatestheGA-dependentdestructionofDELLAs, DELLAdestruction. thuspromotinggrowth(Ueguchi-Tanakaetal.,2005). Genes encoding multiple GID1-related GA receptors were discoveredinArabidopsis,andmutantsmultiplyhomozygousfor HOWDELLAsINHIBITPLANTGROWTH loss-of-functionmutationsinthesegeneswereshowntoexhibit GA-insensitivedwarfism(Griffithsetal.,2006;Iuchietal.,2007; Theaboveadvancesdefinethemolecularmechanismviawhich Willige et al., 2007). Further analysis showed that the GID1– GAopposesthegrowthinhibitorypropertiesoftheDELLAs,but DELLAinteractionspecificallyinvolvestheconservedN-terminal they do not explain how DELLAs inhibit growth. Because the domainsIandIIoftheDELLAprotein(Pengetal.,1999a;Griffiths C-terminaldomainofDELLAsiscloselyrelatedtothatofSCR et al., 2006; Ueguchi-Tanaka et al., 2007; Willige et al., 2007; andothertranscriptionalregulators,itseemedpossiblethatthe Feng et al., 2008), thus finally explaining why mutant DELLA DELLAsassociatewithDNA.However,therearenoreportsof proteinslackingthesedomainsconferGAinsensitivity.Inaddi- directDELLA–DNAassociations.Inaddition,themoderatede- tion, the GA-stimulated interaction between GID1 and DELLA greeofpromoterenrichmentobtainedinchromatinimmunopre- itself increases the affinity of DELLA for the SCFSLY1/GID2 E3 cipitation studies (Zentella et al., 2007) suggested that the ubiquitin ligase (Griffiths et al., 2006), presumably causing in- associationofRGAwithgenepromotersmightinvolveadditional creasedpolyubiquitinationofDELLA,subsequentdestructionof transcriptionalregulators. DELLAbytheproteasome,andthepromotionofgrowth. Further advances in understanding of how DELLAs inhibit Recent crystal structure studies have deepened our under- growthhavecomefromstudiesofplantlightresponses.Plant standing of the molecular spatial relationships governing the growth is strongly influenced by the light environment. For interactions between GID1, GA, and DELLA. Essentially, the example, the growth of the Arabidopsis seedling hypocotyl GID1 protein possesses a central pocket that accommodates (expansionoftheembryonicstemduringseedgerminationand bioactiveGA.PolargroupsinthebioactiveGAmoleculeinteract seedlingestablishment)isinhibitedbylight.Anumberofstudies directlywithGID1andwithwatermoleculesviahydrogenbond- had previously implicated GA regulation as a component of 6of12 ThePlantCell light-mediated hypocotyl growth regulation (e.g., Peng and growthinhibitorsthatact(atleastinpart)byinterferingwiththe Harberd,1997),butitisonlyrecentlythattheDELLAshavebeen activity of growth-promoting transcription factors. In addition, showntocontributetothisprocess.Forexample,DELLA-deficient thegrowthinhibitorypropertiesofDELLAsmaybeenhancedby Arabidopsis seedling hypocotyl growth is partially insensitive to O-GlcNAcmodificationduetoSPY.(2)GAbindswithintheGA light-mediatedgrowthinhibition(Achardetal.,2007a),andDELLA bindingpocketoftheGID1GAreceptor,causingthefoldingofa deficiency also compromises the shade avoidance response lidstructuretowhichtheN-terminalregionoftheDELLAsbinds. (whereby plants sense and respond to competing neighbors; (3) The GA-GID1-DELLA interaction reduces the growth- Djakovic-Petrovic et al., 2007). Thus, DELLA-mediated growth repressingeffectofDELLAs,perhapsbyreducingtheircapacity inhibitionisacomponentoflight-mediatedgrowthinhibition. forinteractingwithgrowth-promotingtranscriptionfactors.(4)The Thelightsignalsthatelicithypocotylgrowthregulationarefirst GA-GID1-DELLAinteractionalsostimulatesthebindingofDELLA perceivedbyphotoreceptorsandsubsequentlycommunicated to the SCFSLY1/GID2 E3 ubiquitin ligase. (5) Polyubiquitination of to signal-transducing transcription factors, such as PHYTO- DELLA by SCFSLY1/GID2 targets DELLA for destruction by the CHROME INTERACTING FACTOR3 (PIF3) and PIF4. Recent proteasome,thusfinallyremovingtheagentofDELLA-mediated studies identified a physical interaction between a conserved growthinhibition(Figure4). Leu-heptad repeat in the DELLAs and the DNA recognition TheGA-GID1-DELLAgrowthregulatorymechanismthussum- domain of the PIF factors (de Lucas et al., 2008; Feng et al., marizedoperatesinangiospermsandappearstobearelatively 2008). This interaction inhibits the binding of PIF4 to gene recent innovation in plant evolution, having arisen sometime promotertargetrecognitionsequences(deLucasetal.,2008), betweenthedivergencesofthebryophytesandthelycophytes suggesting that DELLAs restrain growth by sequestering PIFs fromthelandplantlineage(Hiranoetal.,2007;Yasumuraetal., into inactive protein complexes, thus inhibiting their ability to 2007).ThemostprominentfunctionoftheangiospermGA-GID1- promote growth via gene transcriptional activation. These ob- DELLAmechanismisregulationofthegrowthoforgansfollowing servationsprovideapossiblegeneralframeworkforunderstand- theirdefinitioninshootandrootapicalmeristems.Forexample, ing how DELLAs inhibit plant growth. According to this the Arabidopsis ga1-3 mutant has both a dwarfed shoot framework,DELLAsinhibitgrowthbyinterferingwiththeactivity (Richardsetal.,2001)andashortroot(FuandHarberd,2003), ofgrowth-promotingtranscriptionfactors. inpartbecauseGAregulatespostmeristematicgrowthofthese organs.Infact,theGA-GID1-DELLAmechanismplaysamajor roleintheregulationoforganextensiongrowthofshootandroot ALTERNATIVE(NON-GA)ROUTESTODELLA-DEPENDENT and does so via interaction with the auxin signaling pathway: GROWTHCONTROL auxinregulatesgrowth(atleastinpart)bythemodulationofboth GAbiosynthesisandGAresponsiveness(Rossetal.,2000;Fu Theabovedescribedadvancesprovideamolecularframework and Harberd,2003).Recentevidence indicates thatGA-GID1- forunderstandinghowGAquantitativelyregulatesplantgrowth. DELLA regulation of root extension growth is not generally However, it is becoming clear that there are additional, GA- distributedthroughoutrootcelllayers,butoperatesprimarilyin independent factors that can modulate the growth inhibitory theendodermis(Ubeda-Toma´setal.,2008). function of the DELLAs. One such factor is the putative Inadditiontoitsmajorroleinmodulatingextensiongrowthof O-GlcNAc transferase encoded by SPY (reviewed in Richards plantorganssubsequenttotheirdefinitioninapicalmeristems, etal.,2001).Loss-of-functionspyallelespartiallysuppressthe theGA-GID1-DELLAmechanismalsodeterminessomeaspects dwarfphenotypesconferredbyga1-3,gai,andrga-D17(Peng of developmental patterning. For example, maintenance of et al., 1997, 1999b; Silverstone et al., 1997, 2007). O-GlcNAc pluripotencyinthecellsofthevegetativeshootapicalmeristem transferasestypicallycatalyzeO-GlcNAcmodificationoftarget (the group of cells from which arise the aerial parts of angio- Serresiduesinregulatoryproteins.AreductioninSPYactivity sperms)isinpartdependentondampeningofGA-GID1-DELLA (e.g.,asconferredbyspyalleles)causesanincreaseinDELLA signaling mediated by KNOX transcription factors (Hay et al., proteinabundance(asdetectedantigenicallyorviaGFP-DELLA 2002; Jasinskiet al.,2005). Conversely,growing (postmeriste- fusion),ratherthanthereductionthatmightapriorihavebeen matic)cellscharacteristicallyhaveactivatedGAsignaling. expected for a mutation that causes a reduction in DELLA- mediated growth inhibition (Shimada et al., 2006; Silverstone etal.,2007).Oneplausibleexplanationfortheseobservations(as yet unverified) is that O-GlcNAc modification of DELLAs acti- THEGA-GID1-DELLAMECHANISMENABLESAFLEXIBLE vates (or enhances) the growth inhibition function of DELLAs. GROWTHREGULATIONRESPONSETO Modulation ofO-GlcNAc transferaseactivityvia environmental ENVIRONMENTALVARIABILITY or developmental variables thus provides a potential non-GA PossiblereasonswhyangiospermsmighthaveevolvedtheGA- routeforgrowthcontrolviamodulationofDELLAactivity. GID1-DELLA mechanism of growth regulation become clear when one considers the plant life strategy. Plants are sessile organismsthatneedtobeabletorespondappropriatelyandin THEGA-GID1-DELLAPLANTGROWTH situtothebioticandabioticenvironmentalchallengeswithwhich REGULATORYMECHANISM theyarefaced.Thereisaparticularneedtoregulategrowthin Theadvancesinunderstandingoutlinedintheprecedingpara- responsetoenvironmentalvariability,inpartbecausegrowthis graphscanbesummarizedasfollows(Figure4):(1)DELLAsare energetically demanding and in part because growth-driven GrowthRegulationbyGA-GID1-DELLA 7of12 Figure4. TheGA-GID1-DELLAMechanismofAngiospermGrowthRegulation. Forstep-by-stepguidetopoints(1)to(5)inthemechanism,seemaintext.Growthresultsfromactivationofgrowth-promotinggenes(geneactivated). FormationoftheGA-GID1-DELLAcomplexfreestranscriptionfactorsfromsequestrationbyDELLAs,enablingpreviouslyinactivegrowth-promoting genestobecomeactivated. increasesinbodyvolume/surfaceareatendtoincreasevulner- correlation between ethylene-mediated growth inhibition and ability. Recentstudies show that the GA-GID1-DELLA mecha- DELLAaccumulation.Theconclusionfromthesestudiesisthat nism is highly integrated within the overall angiosperm ethyleneinhibitsgrowth(atleastinpart)viaaDELLA-dependent informationalsignalingandresponsesystem.Wehavealready mechanism.However,therearecircumstancesinwhichethyl- touched upon the relationship between GA-GID1-DELLA and ene promotes (rather than inhibits) the growth of light-grown light signaling in growth regulation. Additional examples come hypocotyls, and in this case, promotion interestingly is also from studiesof the relationship between GA-GID1-DELLA, the accompanied by an accumulation (rather than a depletion) of phytohormoneethylene,andplantstressresponses.Ageneral GFP-RGA in hypocotyl nuclei (Vandenbussche et al., 2007). It idea emerging from these studies is that the GA-GID1-DELLA seemsthatinthiscaseethylenestillpromotesGFP-RGAaccu- mechanism enables plants to maintain transient growth arrest mulation, but this accumulation is not translated into growth andthustosurviveperiodsofadversity. inhibition. Thus, the frequently observed negative correlation EthyleneisperceivedbytheETR1familyofethylenereceptors, between growthand DELLA accumulation is not absolute and thuscausinginactivationofCTR1(aRafkinase–relatedrepres- canbebrokeninspecificcircumstances.Asdescribedabovein sorofethylenesignaling)andresultantaccumulationofEIN3and thecaseofthespymutantphenotype,theseobservationsare EIN3-like ethylene-signaling transcription factors (Guo and indicativeofaphysiologicalroleforregulationofinherentgrowth Ecker, 2004). Initial investigations of the relationship between inhibitory activity of DELLAs that is independent of DELLA ethylenesignalingandtheGA-GID1-DELLAmechanismshowed accumulation. thatethyleneinhibitsDELLA-deficientmutantArabidopsisseed- The close relationships between ethylene signaling and the lingrootgrowthlessthanthatofthewildtypeandthatethylene GA-GID1-DELLA mechanism continue through stages of the inhibitstheGA-induceddisappearanceofGFP-RGAviaCTR1- plantlifecyclebeyondseedlingemergence.Forexample,recent dependentsignaling(Achardetal.,2003).Inaddition,themain- studiesshowthatethyleneregulatesthetransitionfromvegeta- tenance of the exaggerated apical hook structure typical of tive to reproductive growth, and does so, at least in part, via dark-grownethylene-treatedseedlingswasshowntobedepen- interactionwiththeGA-GID1-DELLAmechanism.Theactivation dentonlossofDELLA-mediatedgrowthinhibition(Achardetal., ofethylenesignalingresultsinareductioninGAlevels,andthis 2003;Vriezenetal.,2004).Thus,thereisaconnectionbetween delays floral induction via a DELLA-dependent mechanism. In ethyleneresponseandtheGA-GID1-DELLAmechanismanda addition, a lack of DELLAs suppresses the delayed flowering 8of12 ThePlantCell characteristic of the constitutive ethylene response phenotype resulting in reduced carbohydrate consumption and inhibited conferredbyctr1loss-of-functionalleles(Achardetal.,2007b). growthinresponsetofloodinginrice(FukaoandBailey-Serres, Further analysis indicates that ethylene likely affects DELLAs 2008),justasDELLAsinhibitgrowthinresponsetosaltstressin downstream of the EIN3 transcriptional regulator and delays Arabidopsis (Achard et al., 2006). These observations suggest flowering by repressing the activity of floral meristem identity thattheGA-GID1-DELLAmechanismprovidesageneralmech- genes (LEAFY and SUPPRESSOR OF OVEREXPRESSION OF anism for inhibition of growth and associated resource con- CONSTANS1;Achardetal.,2007b).Theseobservationsidentify sumptioninresponsetoenvironmentaladversity. the GA-GID1-DELLA mechanism as a previously unknown ThelikelihoodthattheGA-GID1-DELLAmechanismisindeed bridgebetweentheethylenesignalingpathwayandfloralmer- a general mechanism for modulating growth response to the istemidentitygenesintheregulationofthetransitionbetween environmentisincreasedbyrecentdiscoveriesthatitregulates vegetativetoreproductivegrowth,probablyprovidingamech- growthinresponsetochangeinawidevarietyofenvironmental anismviawhichenvironmentalstressregulatesthattransition. variables.Forexample,theeffectsofcoldtemperaturesonplant SeveralstudieshavedirectlyimplicatedtheGA-GID1-DELLA growth signaled by the cold-induced CBF1 factor-dependent mechanisminregulatingtheresponseofplantstoenvironmental pathwayaremediatedviaeffectsonGAmetabolism(andcon- stress. For example, high salinity slows the growth of plants. sequently on DELLAs; Achard et al., 2008b), and growth and StudieswithDELLA-deficientArabidopsismutantsshowedthat developmental responses to phosphate starvation are also saltslowsgrowthviaapartiallyDELLA-dependentmechanism modulatedbytheGA-GID1-DELLApathway(Jiangetal.,2007). (Achardetal.,2006).Furtherstudiesrevealedthatsaltcausesa An unexpected recent development has been the discovery reductionininplantabioactiveGAlevels(Achardetal.,2006)and thattheGA-GID1-DELLAmechanismplaysaroleintheregula- thatthisreductioncanbeexplained,atleastinpart,byactivation tion of plant–pathogen interactions. Studies of the pathogen of genes encoding GA-2oxidase, an enzyme that deactivates responses of DELLA-deficient Arabidopsis plants showed that bioactiveGAsbyadditionofahydroxylgrouptothe2Cposition DELLAaccumulationdifferentially affectsresponsetodifferent (Figure1A;Magomeetal.,2008).Thus,saltinhibitsplantgrowth classes of pathogen. Thus, presence of DELLAs is associated by reducing bioactive GA abundance, in turn causing accu- with susceptibility to virulent biotrophs and with resistance to mulation of DELLAs and consequent growth inhibition. Salt- necrotrophs,propertiesthatarerelatedtoaneffectoftheGA- activated DELLA-dependent growth inhibition presumably has GID1-DELLA pathway on the balance between jasmonic acid adaptivesignificancebecauseplantslackingDELLAsaremore and salicylic acid signaling (Navarro et al., 2008). Although susceptible,whereasplantsinwhichDELLAsaccumulate(e.g., concordant with previous examples of the GA-GID1-DELLA ga1-3) are more resistant to the lethal effects of extreme salt mechanism acting as a mediating bridge between different (Achardetal.,2006).TheseobservationsindicatethattheGA- signaling pathways, these observations were unexpected be- GID1-DELLAmechanismprovidesplantswithameansofreg- causetheyrepresentidentificationofaGA-GID1-DELLA–regu- ulatinggrowthappropriatetoenvironmentalconditions,enabling lated phenomenon that is not strictly growth related (the aslowingofgrowthandreducedenergeticcommitmentduring pathogenicity assays usedin theseexperiments involved rela- periodsofenvironmentaladversity.Achardetal.(2008a)iden- tivelymatureleavesthatwerenolongerinthegrowingphase).It tifiedareductioninreactiveoxygenspecieslevelsasapossible ispossiblethatthereareadditionalnon-growthaspectsofGA- mechanism for the restraint of growth and the concomitant GID1-DELLAbiologythatareyettobediscovered. promotionofsurvivalofadversesalinity. AlinkbetweenethyleneandtheGA-GID1-DELLAmechanism has also been implicated in the growth responses of rice to DOESTHEGA-GID1-DELLAMECHANISMHAVE flooding. Flood-tolerant rice survives temporary submergence ADAPTIVESIGNIFICANCE? viaatransientinhibitionofgrowthandcarbohydrateconsump- tionthatiscontrolledbyanethylene-responsivefactorERF-type GiventhattheGA-GID1-DELLAmechanismplayssuchaprom- transcriptionfactorencodedbytheSub1Agene.Submergence inentroleintheresponseofplantstoenvironmentalvariables,it causes ethylene production and the consequent activation of mightbeexpectedthatpossessionofthismechanismisselec- Sub1A. In turn, Sub1A inhibits elongation growth by causing tively advantageous and that variant forms of it might have increasedaccumulationofthericeDELLASLR1andofarelated adaptive significance. Recent studies monitored the effects of protein, SLRL1 (Fukao and Bailey-Serres, 2008). SLRL1 is a artificial selection on anexperimental wheat population segre- proteinthatinhibitsgrowthbutlacksfunctionaldomainsIandII gatingforRht-B1aandRht-B1b(wheatDELLA-encodingalleles (seeabove)andthusinhibitsgrowthinaGA-resistantfashion. conferring tall and dwarf plant phenotypes, respectively; Peng Therefore,SLRL1isfunctionallyanalogoustothemutantDELLA etal.,1999a;Raquinetal.,2008).Meanplantheightincreased proteins encoded bythe mutant gai, D8-1, D8-2023, and Rht- steadilywithnumberofgenerationspostthefounderpopulation B1b alleles described above and is a protein that rice has generation, as did the relative frequency of the RhtB1a allele, recruited to function in flooding response. Thus, as shown indicating that Rht-B1a was under strong positive selection previously in Arabidopsis (Achard et al., 2003), ethylene can throughoutthe17generationsoftheexperiment(Raquinetal., inhibitricegrowthusingaGA-GID1-DELLA–dependentmecha- 2008). At first sight this may seem paradoxical given the well- nism(viaSLR1)andadditionallyusingaDELLA-relatednon-GA documentedincreasesingrainyieldconferredbyRht-B1b(see opposablegrowthinhibitoryprotein(SLRL1).ActivationofSLR1 above),theveryincreasesthatwereresponsiblefortheuseof andSLRL1bySub1Asuppressesenergy-consumingprocesses, theRht-B1balleleingreenrevolutionwheatvarieties.However, GrowthRegulationbyGA-GID1-DELLA 9of12 tallerplantspresumablycompetemoreeffectivelyforlightand limitingfactorinplantgrowthregulation,anddifferentialregula- nutrientswhengrowninheterogeneouspopulations(asopposed tion of SLY1 expression is potentially a mechanism via which tothehomogeneouspopulationstypicalofmodernwheatfields). different plant signaling pathways may (independently of GA) Inaddition,thestrengthofselectionagainstRht-B1bindicates regulate plant growth by reducing DELLA-mediated growth thatallelesconferringDELLAsresistanttooppositionbyGAwill inhibition. Future studies will determine the contributions of beatacompetitivedisadvantageinmanynaturalenvironments, these (and other) non-GA routes to the modulation of DELLA perhapsbecausetheimpairedGAopposabilityimposesaclamp growthinhibitoryfunction. on the flexibility with which plants can modulate growth in Anotherlikelyimportantareaoffutureinvestigationconcerns responsetoenvironmentalchange. theroleofDELLAsasintegratorsofgrowthresponsestoavariety of signals. It has been suggested that the GA-GID1-DELLA mechanismisnodalandprovidesamechanismforintegrating multiple input signals into a single growth output (Alvey and THEGA-GID1-DELLAMECHANISM:OUTSTANDING Harberd,2005).However,manyquestionsremain,notleastwith ISSUESANDQUESTIONS respecttotheunravelingoftherelativeextentstowhichother Asreviewedabove,recentresearchhasshownthattheDELLAs signals (including other hormones) impact upon GA-GID1- are the GA-opposable endogenous plant growth inhibitors DELLAactivitythroughregulationofbioactiveGAbiosynthesis whose existence was first postulated in the late 1950s. We and inactivation, regulation of DELLA susceptibility to GA- havesummarizedthemolecularnatureoftheGA-GID1-DELLA mediatedoppositionofDELLAactivity(interactionwiththeGA mechanism,themechanismviawhichplantsrespondtoGA,and receptor and/or subsequent degradation), or modulation of argued that this mechanism enables plasticity of growth in DELLAactivitybyothermeans.Furthermore,itisclearthatthe responsetoenvironmentalvariability.Wenowpointoutanum- GA-GID1-DELLA mechanism is not the sole mechanism for ber of outstanding issues and questions that are likely fertile integration of growth regulation. For example, DELLAs inhibit areasforfutureresearch. hypocotyl growth in response to light, but a DELLA-deficient First, as described above, the recent demonstration that hypocotylisstillpartiallyphotomorphogenetic(islongerthanthe DELLAsinteractwithPIF3/PIF4transcriptionfactorsprovidesa wild type in light but not as long as a dark-grown wild-type potential general model for understanding how DELLAs inhibit hypocotyl;Achardetal.,2007a;Fengetal.,2008).Thus,there growth. However, the degree of specificity of this interaction mustbeadditionalresponseintegratorsthatworkinconjunction remainsunclear.ThePIFsareasubsetofthebasichelix-loop- withtheDELLAstoinhibithypocotylgrowthinresponsetolight. helix (bHLH) family of transcription factors. Perhaps DELLAs Byextension,itislikelythatthereareadditionalintegratorsthat interactwithawiderspectrumofbHLHsthanthosedefinedas coordinatetheregulationofgrowthinresponsetoenvironmental PIFs, thus sequestering various bHLHs away from the gene variablesingeneral,anddeterminingtheirrelationshipwiththe promotersthattheyactivate.Suchascenariomightexplain,at DELLAsisanimportanttaskforthefuture. leastinpart,thepervasiverolesthatDELLAsappeartoplayin An additional emerging idea concerns the possible relation- angiosperm biology. In addition, since the bHLH transcription ship between DELLA-mediated growth inhibition and resource factorPIL5regulatestheexpressionofDELLA-encodinggenes allocation. Essentially, growth inhibition might have adaptive (Ohetal.,2007),itispossiblethatDELLAsfeedbackregulatetheir significance when environmental impacts (both biotic and abi- ownexpressionviainteractionwithbHLHtranscriptionfactors. otic)threatenresourcelimitation.Prioritizationofresourceallo- Second,thisreviewhasshownhowGAregulatesthegrowth cationmayresultinresourcesbeingdivertedawayfromgrowth inhibition function of DELLAs. However, there are increasing in favor of defense against pathogens or in the adoption of a indicationsthatDELLAfunctioncanalsobemodifiedviaroutes strategy that involves reduced resource consumption during a thatdonotdirectlyinvolveGA.Amongthesepossibleroutesare periodofwaitforimprovedenvironmentalconditions.Thus,the transcriptional regulation of genes encoding DELLAs (e.g., Oh GA-GID1-DELLAmechanismmayenabletherobustadaptation et al., 2007; Fukao and Bailey-Serres, 2008), posttranslational of various aspects of angiosperm biology to environmental activationofDELLAs,andnon-GAroutesformodulatingDELLA threat. abundance.Onepossiblerouteforposttranslationalactivationof Finally, it is possible that consideration of the meaning of DELLAsisthelikelyO-GlcNActransferaseactivityencodedby “growth inhibition” at the cellular level will prove fruitful. The SPY(discussedabove),althoughmodulationofthisactivityhas intriguingpotentialroleofreactiveoxygenspeciesinGA-GID1- not yet been shown to regulate DELLA activity differentially DELLA–mediatedgrowthregulationisdescribedabove,andthis in response to physiological or environmental variables. If is likely to be an important area of further investigation. In O-GlcNAc modification indeed enhances the growth inhibitory addition, plant cell expansion is often characterized as being properties of DELLAs, it is possible that this modification pro- theproductofopposingforcesof(growth-promoting)intracel- motes the interaction between DELLAs and PIF3/4 (or other lularturgorpressureandthe(growth-inhibiting)turgor-resisting bHLHs).Apossiblepointofnon-GAregulationofDELLAabun- forcesofthecellwall.Thisviewhasparallelswiththeproposal danceistherateofpolyubiquitination(andhencedestruction)of thatgrowthisregulatedbytheopposingforcesofGAandaGA- DELLAs by the SCFSLY1/GID2 E3 ubiquitin ligase. 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