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Stems cells in toxicology and medicine PDF

583 Pages·2017·10.033 MB·English
by  SahuSaura C
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Stem Cells in Toxicology and Medicine Stem Cells in Toxicology and Medicine Editor Saura C. Sahu Center for Food Safety and Applied Nutrition, US Food and Drug Administration, USA This edition first published 2017 © 2017 John Wiley & Sons, Ltd Registered Office John Wiley & Sons, Ltd, The Atrium, Southern Gate, Chichester, West Sussex, PO19 8SQ, United Kingdom For details of our global editorial offices, for customer services and for information about how to apply for permission to reuse the copyright material in this book please see our website at www.wiley.com. The right of the author to be identified as the author of this work has been asserted in accordance with the Copyright, Designs and Patents Act 1988. All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted, in any form or by any means, electronic, mechanical, photocopying, recording or otherwise, except as permitted by the UK Copyright, Designs and Patents Act 1988, without the prior permission of the publisher. Wiley also publishes its books in a variety of electronic formats. Some content that appears in print may not be available in electronic books. Designations used by companies to distinguish their products are often claimed as trademarks. All brand names and product names used in this book are trade names, service marks, trademarks or registered trademarks of their respective owners. The publisher is not associated with any product or vendor mentioned in this book. Limit of Liability/Disclaimer of Warranty: While the publisher and author have used their best efforts in preparing this book, they make no representations or warranties with respect to the accuracy or completeness of the contents of this book and specifically disclaim any implied warranties of merchantability or fitness for a particular purpose. It is sold on the understanding that the publisher is not engaged in rendering professional services and neither the publisher nor the author shall be liable for damages arising herefrom. If professional advice or other expert assistance is required, the services of a competent professional should be sought. The advice and strategies contained herein may not be suitable for every situation. In view of ongoing research, equipment modifications, changes in governmental regulations, and the constant flow of information relating to the use of experimental reagents, equipment, and devices, the reader is urged to review and evaluate the information provided in the package insert or instructions for each chemical, piece of equipment, reagent, or device for, among other things, any changes in the instructions or indication of usage and for added warnings and precautions. The fact that an organization or Website is referred to in this work as a citation and/or a potential source of further information does not mean that the author or the publisher endorses the information the organization or Website may provide or recommendations it may make. Further, readers should be aware that Internet Websites listed in this work may have changed or disappeared between when this work was written and when it is read. No warranty may be created or extended by any promotional statements for this work. Neither the publisher nor the author shall be liable for any damages arising herefrom. Library of Congress Cataloging‐in‐Publication Data Names: Sahu, Saura C., editor. Title: Stem cells in toxicology and medicine / [edited by] Saura C. Sahu. Description: Chichester, UK ; Hoboken, NJ : John Wiley & Sons, 2017. | Includes bibliographical references and index. Identifiers: LCCN 2016025077 (print) | LCCN 2016039295 (ebook) | ISBN 9781119135418 (cloth) | ISBN 9781119135425 (pdf) | ISBN 9781119135449 (epub) Subjects: LCSH: Stem cells–Research. | Toxicology–Research. Classification: LCC QH588.S83 S74 2016 (print) | LCC QH588.S83 (ebook) | DDC 616.02/774–dc23 LC record available at https://lccn.loc.gov/2016025077 A catalogue record for this book is available from the British Library. Cover Image: thebackground/Gettyimages Set in 10/12pt Times by SPi Global, Pondicherry, India 10 9 8 7 6 5 4 3 2 1 Dedication I lovingly dedicate this book to: My parents, Gopinath and Ichhamoni, for their gifts of life, love and living example. My wife, Jharana, for her life‐long friendship, love and support as well as for her patience and understanding about the long hours spent at home on planning, writing and editing this book. My children, Megha, Sudhir, and Subir, for their love and care. Saura C. Sahu Laurel, Maryland, USA Contents List of Contributors xx Preface xxvi Acknowledgements xxvii PART I 1 1 Introduction 3 Saura C. Sahu References 4 2 Application of Stem Cells and iPS Cells in Toxicology 5 Maria Virginia Caballero, Ramon A. Espinoza‐Lewis, and Manila Candiracci 2.1 Introduction 5 2.2 Significance 6 2.3 Stem Cell (SC) Classification 7 2.4 Stem Cells and Pharmacotoxicological Screenings 8 2.5 Industrial Utilization Showcases Stem Cell Technology as a Research Tool 8 2.6 Multipotent Stem Cells (Adult Stem Cells) Characteristics and Current Uses 9 2.7 Mesenchymal Stem Cells (Adult Stem Cells) 10 2.8 Hematopoietic Stem Cells (Adult Stem Cells) 11 2.9 Cardiotoxicity 12 2.10 Hepatotoxicity 15 2.11 Epigenetic Profile 17 2.12 Use of SC and iPSC in Drug Safety 18 2.12.1 Potential Benefits of Stem Cell Use in Other Areas 18 2.12.2 Methodologies 18 2.12.3 Economic Benefits of Stem Cell Use 19 2.13 Conclusions and Future Applications 19 Acknowledgments 19 References 19 3 Stem Cells: A Potential Source for High Throughput Screening in Toxicology 26 Harish K Handral, Gopu Sriram, and Tong Cao 3.1 Introduction 26 3.2 Stem Cells 27 viii Contents 3.2.1 Embryonic Stem Cells (ESC s) 27 3.2.2 Foetal Stem Cells 29 3.2.3 Adult Stem Cells 29 3.2.4 Adult Stem Cells in Other Tissues 30 3.3 High Throughput Screening (HTS) 31 3.3.1 Current Strategies and Types of High Throughput Screening 32 3.3.2 In Vitro Biochemical Assays 33 3.3.2.1 Fluorescent Based Assays 33 3.3.2.2 Luminescence‐Based Assays 33 3.3.2.3 Colorimetric and Chromogenic Assays 34 3.3.2.4 Mass Spectroscopy (MS) Based Detection Assays 34 3.3.2.5 Chromatography‐Based Assays 34 3.3.2.6 Immobilization and Label‐Free Detection Assays 35 3.3.3 Cell‐Based Assays 35 3.3.3.1 Reporter Gene Assays 36 3.3.3.2 Cell‐Based Label Free Readouts 36 3.4 Need for a Stem Cell Approach in High Throughput Toxicity Studies 37 3.5 Role of Stem Cells in High Throughput Screening for Toxicity Prediction 38 3.5.1 Applications of Stem Cells in Cardiotoxicity HTS 38 3.5.2 Applications of Stem Cells in Hepatotoxicity HTS 39 3.5.3 Applications of Stem Cells in Neurotoxicity HTS 40 3.6 Conclusion 40 Acknowledgement 41 Disclosure Statement 41 Author’s Contribution 41 References 41 4 Human Pluripotent Stem Cells for Toxicological Screening 50 Lili Du and Dunjin Chen 4.1 Introduction 50 4.2 The Biological Characteristics of hPSCs 51 4.2.1 The Biological Characteristics of hESCs 51 4.2.2 The Biological Characteristics of hiPSCs 51 4.3 Screening of Embryotoxic Effects using hPSCs 52 4.3.1 Screening of Embryotoxic Effects using hESCs 52 4.3.2 Screening of Embryotoxic Effects using hiPSCs 54 4.4 The Potential of hPSC‐Derived Neural Lineages in Neurotoxicology 55 4.4.1 T he Challenge of hPSC s‐Derived Neural Lineages in Neurotoxicology Applications 55 4.4.2 The New Biomarkers in Neurotoxicology using hPSC ‐Derived Neural Lineages 56 4.4.2.1 Gene Expression Regulation 56 4.4.2.2 Epigenetic Markers 57 4.4.2.3 Mitochondrial Function 58 4.4.3 The New Methods in Neurotoxicology using hPSC ‐Derived Neural Lineages 58 4.4.3.1 High‐Throughput Methods 58 4.4.3.2 Three‐Dimensional (3‐D) Culture 59 4.5 The Potential of hPSC ‐Derived Cardiomyocytes in Cardiotoxicity 60 4.5.1 The Challenge of hPSC ‐Derived Cardiomyocytes in Cardiotoxicology Applications 60 Contents ix 4.5.2 The New Biomarkers in Cardiotoxicology using hPSC ‐Derived Cardiomyocytes 60 4.5.2.1 Gene Expression 61 4.5.2.2 Multi‐Electrode Array 61 4.5.3 High‐Throughput Methods 62 4.6 The Potential of hPSC‐Derived Hepatocytes in Hepatotoxicity 62 4.6.1 The Challenge of hPSCs‐Derived Hepatocytes in Hepatotoxicology Application 62 4.6.2 The New Biomarkers in Hepatotoxicology using hPSC ‐Derived Hepatocytes 63 4.6.3 The New Methods in Hepatotoxicology using hPSC ‐Derived Hepatocytes 64 4.6.3.1 iPSC ‐ HH ‐Based Micropatterned Co‐Cultures (iMPCC s) with Murine Embryonic Fibroblasts 64 4.6.3.2 Suspension Culture of Aggregates of ES Cell‐Derived Hepatocytes 65 4.6.3.3 Long‐Term Exposure to Toxic Drugs 65 4.7 Future Challenges and Perspectives for Embryotoxicity and Developmental Toxicity Studies using hPSCs 65 Acknowledgments 66 References 67 5 Effects of Culture Conditions on Maturation of Stem Cell‐Derived Cardiomyocytes 71 Deborah K. Hansen, Amy L. Inselman, and Xi Yang 5.1 Introduction 71 5.2 Lengthening Culture Time 75 5.3 Substrate Stiffness 76 5.4 Structured Substrates 78 5.5 Conclusions 82 Disclaimer 82 References 83 6 Human Stem Cell‐Derived Cardiomyocyte In Vitro Models for Cardiotoxicity Screening 85 Tracy Walker, Kate Harris, Evie Maifoshie, and Khuram Chaudhary 6.1 Introduction 85 6.1.1 Cardiotoxicity in Preclinical and Clinical Drug Development 85 6.1.2 Functional Cardiotoxicity 86 6.1.3 Structural Cardiotoxicity 87 6.1.4 Requirement for Improved In Vitro Models to Predict Human Cardiotoxicity 88 6.2 Overview of hPSC‐Derived Cardiomyocytes 88 6.3 Human PSC‐CM Models for Cardiotoxicity Investigations 90 6.3.1 hPSC‐CMs for the Assessment of Electrophysiological Cardiotoxicity 90 6.3.1.1 Patch Clamp Assays 91 6.3.1.2 Voltage Sensitive Dyes (VSDs) 92 6.3.1.3 Optogenetics 93 6.3.1.4 Multielectrode Array (MEA) Assays 94 6.3.1.5 Impedance Assays 96 6.3.1.6 Calcium Imaging Assays 98 6.3.2 hPSC‐CMs for the Assessment of Contractile Cardiotoxicity 98 6.3.2.1 Muscular Thin Films 99 6.3.2.2 Engineered Heart Tissues (EHTs) 99 6.3.2.3 Impedance Assays 101 6.3.2.4 Calcium Imaging Assays 102 x Contents 6.3.3 hPSC‐CMs for the Assessment of Structural Cardiotoxicity 102 6.3.3.1 Mechanisms of Cardiomyocyte Cell Death as Endpoints in Drug Screening 103 6.3.3.2 High Content Analysis 106 6.3.3.3 Impedance Assays 108 6.3.3.4 SeaHorse Flux Analysers 109 6.3.3.5 Complex and 3D Models 110 6.4 Conclusions and Future Direction 112 References 112 7 Disease‐Specific Stem Cell Models for Toxicological Screenings and Drug Development 122 Matthias Jung, Juliane‐Susanne Jung, Jovita Schiller, and Insa S. Schroeder 7.1 Evidence for Stem Cell‐Based Drug Development and Toxicological Screenings in Psychiatric Diseases, Cardiovascular Diseases and Diabetes 122 7.1.1 Introduction into Stem‐Cell Based Drug Development and Toxicological Screenings 122 7.1.2 Relevance for Psychiatric and Cardiovascular Diseases 123 7.1.3 Advantages of Human Disease‐Specific Stem Cell Models 124 7.1.4 Pluripotent Stem Cell Models 125 7.1.5 Reprogramming of Somatic Cells for Disease‐Specific Stem Cell Models 126 7.1.6 Transdifferentation of Somatic Cells for Disease‐Specific Stem Cell Models 126 7.2 Disease‐Specific Stem Cell Models for Drug Development in Psychiatric Disorders 127 7.2.1 Disease‐Specific Stem Cell Models Mimicking Neurodegenerative Disorder 127 7.2.2 Disease‐Specific Stem Cell Models Mimicking AD 128 7.2.3 Disease‐Specific Stem Cell Models Mimicking Neurodevelopmental Disorders 129 7.2.4 Disease‐Specific Stem Cell Models Mimicking SCZ 131 7.3 Stem Cell Models for Cardiotoxicity and Cardiovascular Disorders 132 7.3.1 Generating Cardiomyocytes In Vitro 132 7.3.2 Generating Microphysiological Systems to Mimic the Human Heart 133 7.3.3 Disease‐Modeling using Microphysiological Cardiac Systems 133 7.4 Stem Cell Models for Toxicological Screenings of EDCs 133 7.4.1 In Vitro Analysis of EDCs in Reproduction and Development 134 7.4.2 In Vitro Analysis and Toxicological Screenings of Drugs 135 References 135 8 Three‐Dimensional Culture Systems and Humanized Liver Models Using Hepatic Stem Cells for Enhanced Toxicity Assessment 145 Ran‐Ran Zhang, Yun‐Wen Zheng, and Hideki Taniguchi 8.1 Introduction 145 8.2 Hepatic Cell Lines and Primary Human Hepatocytes 146 8.3 Embryonic Stem Cells and Induced Pluripotent Stem‐Cell Derived Hepatocytes 147 8.4 Ex Vivo: Three‐Dimensional and Multiple‐Cell Culture System 148 8.5 In Vivo: Humanized Liver Models 149 8.6 Summary 150 Acknowledgments 150 References 150 9 Utilization of In Vitro Neurotoxicity Models in Pre‐Clinical Toxicity Assessment 155 Karin Staflin, Dinah Misner, and Donna Dambach 9.1 Introduction 155 Contents xi 9.1.1 Limitations of Animal Models and the Utility of In Vitro Assays for Neurotoxicity Testing 155 9.1.2 How Regulatory Requirements Can Shape the Development of In Vitro Screening Tools and Efforts 157 9.1.3 In Vitro Assays as Useful Tools for Assessing Neurotoxicity in a Pharmaceutical Industry Setting 158 9.2 Current Models of Drug‐Related Clinical Neuropathies and Effects on Electrophysiological Function 159 9.2.1 Neuropathy Assessment 160 9.2.2 Seizure Potential and Electrophysiological Function Assessments 161 9.2.3 Multi Electrode Arrays to Model Electrophysiological Changes Upon Drug Treatment 161 9.3 Cell Types that Can Potentially Be Used for In Vitro Neurotoxicity Assessment in Drug  Development 162 9.3.1 Primary Cells Harvested from Neuronal Tissues 162 9.3.2 Immortalized Cells and Cell Lines 164 9.3.3 Induced Pluripotent Stem (iPS) Derived Cells 165 9.4 Utility of iPSC Derived Neurons in In Vitro Safety Assessment 167 9.4.1 iPSC Derived Neurons in Electrophysiology 167 9.4.2 iPSC Derived Neurons to Study Neurite Dynamics 167 9.5 Summary of Key Points for Consideration in Neurotoxicity Assay Development 170 9.6 Concluding Remarks 172 References 172 10 A Human Stem Cell Model for Creating Placental Syncytiotrophoblast, the Major Cellular Barrier that Limits Fetal Exposure to Xenobiotics 179 R. Michael Roberts, Shinichiro Yabe, Ying Yang, and Toshihiko Ezashi 10.1 Introduction 179 10.2 General Features of Placental Structure 180 10.3 The Human Placenta 180 10.4 Human Placental Cells in Toxicology Research 182 10.5 Placental Trophoblast Derived from hESC 183 10.6 Isolation of Syncytial Areas from BAP‐Treated H1 ESC Colonies 185 10.7 Developmental Regulation of Genes Encoding Proteins Potentially Involved in Metabolism of Xenobiotics 185 10.7.1 Cytochrome P450 Family Members 186 10.7.2 SLC Gene Family Members 188 10.7.3 ATP‐Binding Cassette (ABC) Transporters 189 10.7.4 Metallothionein Family Members 190 10.8 Concluding Remarks 191 Acknowledgments 192 References 192 11 The Effects of Endocrine Disruptors on Mesenchymal Stem Cells 196 Marjorie E. Bateman, Amy L. Strong, John McLachlan, Matthew E. Burow, and Bruce A. Bunnell 11.1 Mesenchymal Stem Cells 196 11.1.1 Characterization 196 xii Contents 11.1.2 Differentiation 197 11.1.2.1 Adipogenic 197 11.1.2.2 Osteogenic 197 11.1.3 Functions and Activities 197 11.2 Endocrine Disruptors 198 11.2.1 EDC Major Epidemiologic Associations 198 11.2.1.1 EDC Association with Obesity 198 11.2.1.2 EDC Association with Diabetes 199 11.2.2 Challenges with Exposure Study Interpretation in Human Subjects 199 11.2.2.1 Nonmonotonicity of EDC Dose‐Response Curves 199 11.2.2.2 EDC Exposure at Critical Developmental Windows and Association with Adult Disease 200 11.2.2.3 Effects of Combinations of EDCs 200 11.2.3 Mechanisms of Action of EDCs 201 11.3 Pesticides 201 11.3.1 Organophosphates 201 11.3.1.1 Cell‐Type Specific Effects 201 11.3.1.2 Molecular Effects 203 11.3.2 DDT 205 11.3.2.1 Cell‐Specific Effects 205 11.3.2.2 Molecular Effects 206 11.4 Alkyl Phenols and Derivatives 206 11.4.1 Cell‐Specific Effects 208 11.4.1.1 Effects on Adipocytes and Precursors of Adipocytes 208 11.4.1.2 Effects on Osteoblasts and Precursors of Osteoblasts 209 11.4.2 Molecular Effects 209 11.5 Bisphenol A 211 11.5.1 Cell‐Specific Effects 211 11.5.1.1 Effects on Adipocytes and Precursors of Adipocytes 212 11.5.1.2 Effects on Osteoblasts and Precursors of Osteoblasts 214 11.5.2 Molecular Effects 214 11.6 Polychlorinated Biphenyls 216 11.6.1 Cell‐Specific Effects 217 11.6.1.1 Effects on Adipocytes and Precursors of Adipocytes 217 11.6.1.2 Effects on Osteoblasts and Precursors of Osteoblasts 218 11.6.2 Molecular Effects 220 11.7 Phthalates 221 11.7.1 Cell‐Specific Effects 222 11.7.1.1 Effects on Adipocytes and Precursors of Adipocytes 222 11.7.1.2 Effects on Osteoblasts and Precursors of Osteoblasts 223 11.7.2 Molecular Effects 225 11.8 Areas for Future Research 225 11.9 Conclusions 226 Abbreviations 226 References 228

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