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Soil Health and Intensification of Agroecosystems Soil Health and Intensification of Agroecosystems Edited by Mahdi M. Al-Kaisi Iowa State University, Ames, IA, United States Birl Lowery University of Wisconsin-Madison, Madison, WI, United States Academic Press is an imprint of Elsevier 125 London Wall, London EC2Y 5AS, United Kingdom 525 B Street, Suite 1800, San Diego, CA 92101-4495, United States 50 Hampshire Street, 5th Floor, Cambridge, MA 02139, United States The Boulevard, Langford Lane, Kidlington, Oxford OX5 1GB, United Kingdom Copyright © 2017 Elsevier Inc. All rights reserved. No part of this publication may be reproduced or transmitted in any form or by any means, electronic or mechanical, including photocopying, recording, or any information storage and retrieval system, without permission in writing from the publisher. Details on how to seek permission, further information about the Publisher’s permissions policies and our arrangements with organizations such as the Copyright Clearance Center and the Copyright Licensing Agency, can be found at our website: www.elsevier.com/permissions. This book and the individual contributions contained in it are protected under copyright by the Publisher (other than as may be noted herein). Notices Knowledge and best practice in this field are constantly changing. As new research and experience broaden our understanding, changes in research methods, professional practices, or medical treatment may become necessary. Practitioners and researchers must always rely on their own experience and knowledge in evaluating and using any information, methods, compounds, or experiments described herein. In using such information or methods they should be mindful of their own safety and the safety of others, including parties for whom they have a professional responsibility. To the fullest extent of the law, neither the Publisher nor the authors, contributors, or editors, assume any liability for any injury and/or damage to persons or property as a matter of products liability, negligence or otherwise, or from any use or operation of any methods, products, instructions, or ideas contained in the material herein. British Library Cataloguing-in-Publication Data A catalogue record for this book is available from the British Library Library of Congress Cataloging-in-Publication Data A catalog record for this book is available from the Library of Congress ISBN: 978-0-12-805317-1 For Information on all Academic Press publications visit our website at https://www.elsevier.com/books-and-journals Publisher: Nikki Levy Acquisition Editor: Nancy Maragioglio Editorial Project Manager: Billie Jean Fernandez Production Project Manager: Nicky Carter Designer: Victoria Pearson Typeset by MPS Limited, Chennai, India List of Contributors Abdullah Alhameid South Dakota State University, Brookings, SD, United States Mahdi M. Al-Kaisi Iowa State University, Ames, IA, United States Francisco J. Arriaga University of Wisconsin-Madison, Madison, WI, United States Kipling S. Balkcom USDA-ARS National Soil Dynamics Laboratory, Auburn, AL, United States Marisol Berti North Dakota State University, Fargo, ND, United States Caroline Colnenne-David INRA Research Center at Versailles, Versailles, France Christian Dold National Laboratory for Agriculture and the Environment, Ames, IA, United States Mathew E. Dornbush University of Wisconsin-Green Bay, Green Bay, WI, United States Yucheng Feng Auburn University, Auburn, AL, United States Clark J. Gantzer University of Missouri, Columbia, MO, United States Mohammad H. Golabi University of Guam, Mangilao, Guam Greta Gramig North Dakota State University, Fargo, ND, United States Jose Guzman The Ohio State University, Columbus, OH, United States Jerry L. Hatfield National Laboratory for Agriculture and the Environment, Ames, IA, United States John Hendrickson USDA-Agricultural Research Service, Mandan, ND, United States Randall D. Jackson University of Wisconsin-Madison, Madison, WI, United States Claudia Pozzi Jantalia Embrapa Agrobiology, Rio de Janeiro, Brazil Virginia L. Jin USDA-ARS, Lincoln, NE, United States Jane M.-F. Johnson USDA-ARS, Morris, MN, United States Shibu Jose University of Missouri, Columbia, MO, United States Robert J. Kremer University of Missouri, Columbia, MO, United States Sandeep Kumar South Dakota State University, Brookings, SD, United States Rattan Lal The Ohio State University, Columbus, OH, United States Yvonne Lawley University of Manitoba, Winnipeg, MB, Canada Mark Liebig United States Department of Agriculture, Agriculture Research Service, Northern Great Plains Research Laboratory, Mandan, ND, United States Birl Lowery University of Wisconsin-Madison, Madison, WI, United States Amadou Maiga South Dakota State University, Brookings, SD, United States; University of Sciences, Technics and Technologies of Bamako, Mali Kenneth R. Olson University of Illinois, Urbana, IL, United States Shannon Osborne USDA-ARS, Brookings, SD, United States Matt Sanderson USDA-Agricultural Research Service, Mandan, ND, United States Thomas Schumacher South Dakota State University, Brookings, SD, United States Bobby A. Stewart West Texas A&M University, Canyon, TX, United States xiii xiv List of Contributors Catherine E. Stewart USDA-ARS, Fort Collins, CO, United States Colin Tobin South Dakota State University, Brookings, SD, United States Ranjith P. Udawatta University of Missouri, Columbia, MO, United States Adam C. von Haden University of Wisconsin-Madison, Madison, WI, United States Sharon L. Weyers USDA - ARS, North Central Soil Conservation Research Lab, Morris, MN, United States Abbey Wick North Dakota State University, Fargo, ND, United States Zhengqin Xiong Nanjing Agricultural University, Nanjing, China Preface There is considerable awareness these days about how people worldwide are concerned about their personal health. It is equally important that the world population should have even greater concern about soil health as the soil is the medium where most of our food, and fiber, is derived/produced. Human health is directly related to the food we eat and water we drink. Not only is soil health related to food safety, but it is also directly related to food production and security, and water quality in some settings. Good or healthy soil results in much greater and sustainable food production than degraded soil. Thus, soil health is key to future human health and a sufficient food supply. The terms soil health and soil quality are closely linked and often used interchangeably as a reference or benchmark for the functionality of soil systems. Attempts to define soil health or quality by scientists all focus on the same fundamental building units of what defines a well-functioning soil ecosystem (good biological, physical, and chemical properties). There have been numerous definitions proposed for soil health by various scientists, but Doran et al. (1996, 1999) have been credited with providing the most widely cited one. Accordingly, one of the most recent definitions associate with Doran is: “Soil quality or health can be broadly defined as the capacity of a living soil to function, within natural or managed ecosystem boundaries, to sustain plant and animal productivity, maintain or enhance water and air quality, and promote plant and animal health” (Doran et al., 1999). The definition by Doran et al. (1999) characterizes the soil as (1) a medium that supports and promotes the growth and development of plants, animals, and humans, while regulating water processes in the ecosystem, (2) an environmental buffer that regulates and degrades hazardous compounds in the ecosystem, and (3) a medium that provides food and fiber services for sustaining animal and human lives. While it would be good if soils were all highly productive, and stagnant with respect to this abundant production, and as such in good health, this is not the case. Soils are very dynamic, ever-changing both chemically, physically, and biologically. Thus, soil health is in a state of constant flux since these characteristics impact soil health. Soil health is of concern for both managed and nonmanaged ecosystems. However, of most concern is the managed agroecosystem. When soils are managed in a manner such that soil erosion and other degrading causes and practices are reduced, or if possible eliminated, good soil health xv xvi Preface is maintained. In addition to human influence on soil health, the weather, including climate change, plays an important role in affecting soil functions. Climate change is a threat to Earth as we know it, and to human existence. The reason being that it is one of the greatest threats of the modern era to soil, the most fundamental of all natural resources on Earth. Soil is the beginning and end all for agricultural production and food security. The threat of climate change to soil includes soil health and sustainability, because as the climate warms biological activity will increase and this will result in a reduction in soil organic carbon, which is key to good soil health. The threat of climate change to soil heath can be accelerated by the degree of agriculture intensification. Intensified agriculture evokes more of a process, rather than an explicit method of production. Over millennia, a variety of technological advances in agricultural practices have led to intensification of agriculture. In this sense, intensification of agriculture can be defined as “increasing productivity on a set area of land.” This definition distinguishes intensification from extensification, which can be defined as “increasing productivity by increasing land area under production.” In both cases, these approaches present detrimental effects to soil health and sustainability. However, with agricultural intensification, genetic and chemical advances in agricultural technologies have led to both stabilization and destabilization of the biological, physical, and chemical nature of soils. The required system inputs and management practices have had a global devastating impact on soil resources, where soil erosion, soil organic matter loss, and decline in soil biodiversity to name a few, are endemic in modern agriculture systems. The link between agroecosystem intensification and soil health is magnified by management practices that led to desertification, deforestation, erosion, and other forms of soil degradation. These dynamics, along with weather variability, such as frequent wet and drought events, are prevalent in different parts of the world and are expected to increase with climate change. The decline in soil productivity as a result of soil erosion and other forms of degradation is manifested in the deterioration of soil health/quality or functionality, where soil chemical, physical, and biological properties are severely degraded. These soil characteristics are the foundation for a productive soil and its ecosystem services. These soil functions are critical to food and fiber production, including nutrient provision and cycling, protection against pests and pathogens, production of growth factors, water availability, and the formation of stable soil physical structure capable of reducing the potential risks of soil erosion and increasing water processing. These functions are strongly affected by climate variability and extreme weather conditions. Therefore, without stable agricultural conservation systems that encompass practices that mitigate extreme climatic conditions, these soil health functions can be degraded. The adoption of such conservation practices within production fields and on marginal lands can provide solutions to combat natural and anthropogenic management effects on soil resiliency. The task through this book is to identify and present management practices, systems, and alternatives within the confines of intensified agricultural systems Preface xvii to transform such systems into sustainable intensified systems that can provide food, fiber, and animal feed to meet the challenge of increased human population, yet preserving soil resources and ecosystem services. An attempt has been made in this book to provide an overview of basic or fundamental soil properties and relationships, and climate impacts to complex and wide-ranging and contrasting management systems that will influence soil health under dryland to humid environments. An effort has been made to cover all potential soil and crop management practices for maintaining good soil health under many different environmental conditions including a global prospective where possible. This includes different cropping systems, cover crops, perennial cover crops, livestock integration with cropping, managing intensified agroecosystems, agroforestry, low input systems to intensification, nutrient cycling, and biotechnology use in modern agriculture production role in affecting soil health. The hope is that this book will contribute to and provide insight to the current dialogue about the importance of soil health and sustainability, by building on the accomplishments and contributions of countless numbers of scientists regarding the concept of soil health/quality during the past few decades. The editors express their sincere thanks and appreciation to all chapters’ authors and the publisher for their excellent cooperation and contributions to this book. As with any scientific endeavor, the extension of knowledge is based on a body of scholarly and discovery work by past and present scientists that we feel indebted to for their contribution. Mahdi M. Al-Kaisi and Birl Lowery References Doran, J.W., Sarrantonio, M., Liebig, M., 1996. Soil health and sustainability. Adv. Agron. 56, 1–54. Doran, J.W., Jones, A.J., Arshad, M.A., Gilley, J.E., 1999. Determinants of soil quality and health. In: Lal, R. (Ed.), Soil Quality and Soil Erosion. CRC Press, pp. 17–36. CHAPTER 1 Fundamentals and Functions of Soil Environment Mahdi M. Al-Kaisi1, Rattan Lal2, Kenneth R. Olson3 and Birl Lowery4 1Iowa State University, Ames, IA, United States 2The Ohio State University, Columbus, OH, United States 3University of Illinois, Urbana, IL, United States 4University of Wisconsin-Madison, Madison, WI, United States 1.1 Introduction The soil system is complex and dynamic. The definition of soil varies widely, as it is dictated by its use and how we perceive soil as a society for providing services, food, habitat, and enjoyment, where these functions are essential to soil health or quality. One well-established definition of soil is a medium that includes minerals, organic matter, countless organisms, liquid, and gases that together support life on earth through many services. Soil is the foundation for early and modern agriculture, and for human civilization. Most people think of farming or gardening when they think of soils (Brevik, 2005). However, the definition of soil depends on the multiple uses of this medium for different purposes such as farming, engineering, and environment. To a farmer, soil is a medium to produce food, which differs from that of a geologist, who considers soil a natural medium and unconsolidated materials above bedrock. An engineer defines soil as a naturally occurring surface layer formed by complex biochemical and physical weathering processes that contains living matter. Soil is considered capable of supporting plant, animal, and human life by agronomists and pedologists (Brevik, 2005). Soil environment and functions are influenced by the parent materials and forming factors that contribute to the physical, chemical, and biological characteristics of soils. The inorganic fractions of mineral soils generally consist of sand, silt, and clay. The proportion of these different fractions determines soil texture, along with its subsequent chemical, physical, and biological properties. Soil formation progresses in steps and stages that are not distinctly separated. These processes are overlapping, and it may not be possible to know when one stage in soil formation stops and another starts (Huggett, 1998). Soil characteristic depends primarily on the parent materials, and secondarily on the vegetation, the topography, and time. These are the five variables known as the factors of soil formation (Jenny, 1941). The typical development of a soil and its profile Soil Health and Intensification of Agroecosystems. DOI:http://dx.doi.org/10.1016/B978-0-12-805317-1.00001-4 1 © 2017Elsevier Inc. All rights reserved. 2 Chapter 1 is called pedogenesis, which includes physical and chemical processes and disintegration of the exposed rock formation as the soil’s parent material (Hillel, 1998). These loosened materials are colonized by living organisms (plant and animal, micro- and macroorganisms). This process leads to accumulation of soil organic matter (SOM) at and below the soil surface resulting in the formation of an A horizon. Important aspects of soil formation and development include two processes of eluviation (washing out) and illuviation (washing in), where clay particles and other substances, including calcium carbonate, emigrate from the overlay surface, eluvial A horizon, and accumulate in the underlying illuvial B horizon (Jenny, 1941). The formation of the soil profile and its physical, chemical, and biological characteristics through these processes differ from location to location and region to region. In arid regions, for example, salt movement from upper to lower horizons may create physical, chemical, and biological conditions that are different from those in humid areas and the tropical, where there is more of a tendency for leaching of minerals and chemicals through the soil profile because the driving force for this reaction being water, is greater in these environments. Therefore, different soil properties, such as color or SOM concentration, occur in the top soil layer and at subsequent depths of the soil profile (Weil and Brady, 2016). These processes influence soil fertility, water availability, and SOM content, which limit the choice of type of crops and management practices that are essential for sustaining soil health and productivity. Therefore, the level of soil health is different for different soil types. 1.2 Soil Properties and Interrelationships 1.2.1 Soil Physical Environment The soil physical environment is generally characterized by three distinct phases that include the solid phase that forms the soil matrix, the liquid phase comprised of water in the soil system, called the soil solution, and the gaseous phase or the soil atmosphere. The soil matrix (mineral component) consists of soil particles varying in size, shape, and chemical properties (Fig. 1.1). The formation of the soil matrix through the grouping of different particles with amorphous substances, particularly SOM, when attached to the surface of different mineral particles, Figure 1.1 Schematic representation of pore spaces between soil aggregates.

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