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Secondary Antibodies and Conjugates PDF

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F(ab’)2 Fragment Affinity-Purified Ordering e-mail: Specialising in Secondary Antibodies and Conjugates Immunofluorescence Western Blotting Flow Cytometry In SituHybridization Electron Microscopy Enzyme Immunohistochemistry STED Microscopy 2-photon Microscopy ELISA www.jireurope.com Contact and Ordering Information Who We Are Ordering Information Jackson ImmunoResearch Laboratories, Inc.specialises in the production and For further information about any of our products and services please call us conjugation of affinity-purified secondary antibodies and purified immunoglobulins. anytime during normal office hours (GMT), which are:- We have strict quality control standards giving our products an unparalleled reputation 08.30hrs to 17.00hrs Monday to Thursday among the scientific community for reliability and reproducibility. Our range includes 08.30hrs to 16.00hrs Friday Affinity Purified Whole IgG, F(ab')2 Fragment and Monovalent Fab Fragment Antibodies with a multitude of species and conjugate options. We accept orders by any of the following methods: • Telephone: +44 (0) 1638 782616 There are in addition to our Flow Cytometry and Western Blot optimised antibodies, • Fax: +44 (0) 1638 668462 an extensive range of blocking reagents and much more, providing a comprehensive solution for immunological applications. • Email: [email protected] • Address: Unit 7 | Acorn Business Centre | Oaks Drive | Newmarket Our goal is to provide research scientists with the largest selection of high quality CB8 7SY UK secondary reagents and the best technical and customer services possible. Please provide the following information: From our European hub we offer Euro currency trading with fast delivery. • Delivery and Invoice Address • VAT Number (if applicable) All Jackson ImmunoResearchoperations, including the • Product Code(s) required sales, technical and distribution services of Jackson ImmunoResearch Europecomply with industry standards You can also order via our online shopping cart at www.jireurope.com and are accredited with ISO 9001:2008certification. Conditions: Technical Assistance ALL PRODUCTS LISTED IN THIS CATALOGUE ARE FOR IN VITRORESEARCH USE ONLY. No product listed in this catalogue is a medical device. They are not intended for diagnostic or therapeutic purposes.Nothing disclosed herein is to be construed as a recommendation to use our products in violation of any Our highly qualified and dedicated team patents. Jackson ImmunoResearch cannot be held responsible for patent infringements or other violations that may occur with the use of these products. of scientists are ready to assist you. Jackson ImmunoResearch makes no implied or other warranty of merchantability or fitness for a particular use and in no event shall Jackson ImmunoResearch be responsible for any consequential or other damages beyond the cost of replacing any product of Jackson ImmunoResearch. Email [email protected] we will Customer agrees to indemnify and hold Jackson ImmunoResearch harmless and to reimburse Jackson ImmunoResearch for all costs related to any claim arising as a result be delighted to help. of customer's use of any Jackson ImmunoResearch product contrary to the terms contained herein or otherwise specified in other documentation. 2 Contents Ordering e-mail: [email protected] Technical e-mail: [email protected] Ordering Information.....................................................................inside front cover Cy2, Cy3 and Cy5 Conjugates for Permanent Mounting.................................68 Technical Information - Affinity-Purified Secondary Antibodies.....................4 Streptavidin...........................................................................................................71 Selection and Location of Affinity-Purified Secondary Antibodies..........................4 Multiple Labelling (ML) Using Conjugated Secondary Antibodies.........................7 ImmunoGold Reagents........................................................................................72 Probes Conjugated to Affinity-Purified Antibodies and to Other Proteins...............8 LM Grade 4 nm Colloidal Gold - Antibody Complexes........................................73 Fluorescent Dyes...........................................................................................8 EM Grade 6 nm, 12 nm & 18 nm Colloidal Gold - Antibody Complexes..............74 Alexa Fluor®.......................................................................................8-12 Cyanine (CyTM2, Cy3, Cy5)...............................................................8-12 Peroxidase-Anti-Peroxidase (PAP) Soluble Immune Complexes.................75 DyLight 405..........................................................................................10 Aminomethylcoumarin Acetate (AMCA).................................................10 Solid-Phase Immunoadsorbent Gels................................................................75 Fluorescein Isothiocyanate (FITC/DTAF)...............................................11 Rhodamine RedTM-X (RRX)...................................................................12 Primary Antibodies for Signal Enhancement...................................................76 Biotin-SPTM(long spacer)............................................................................13 Purified IgG Fraction Monoclonal Mouse Anti-Digoxin........................................76 Enzymes......................................................................................................13 Purified IgG Fraction Monoclonal Mouse Anti-Biotin...........................................76 Purified IgG Fraction Monoclonal Mouse Anti-Fluorescein..................................76 Whole IgG Affinity-Purified Secondary Antibodies....................................14-35 Affinity-Purified Anti-Horseradish Peroxidase......................................................76 F(ab')2 FragmentAffinity-Purified Secondary Antibodies.........................36-45 Normal Serums and Gamma Globulins.............................................................78 Monovalent Fab Fragment Affinity-Purified Secondary Antibodies Bovine Serum Albumin (IgG-Free, Protease-Free)..........................................79 for Blocking and for Double Labelling Primary Antibodies from the Same Host Species.......................................................................................46-52 Purified Proteins from Normal Serums........................................................80-89 Secondary Antibodies for Flow Cytometry..................................................53-58 Antisera to Immunoglobulins, Whole Serums and Enzymes.........................90 IgG Controls and Streptavidin Conjugates for Flow Cytometry.....................58 Trademarks and Licences...........................................................inside back cover Anti-Mouse IgG Subclass Specific Antibodies................................................60 Anti-IgG, Light Chain Specific Antibodies for Western Blotting after Immunoprecipitation (IP)...........................................................................62 Alexa Fluor®680 and Alexa Fluor®790 Conjugates for High Sensitivity Western Blots...........................................................................64 www.jireurope.com Telephone: +44 (0)1638 782616 Fax: +44 (0)1638 668462 3 Technical Information - Affinity-Purified Secondary Antibodies Affinity-purified antibodies are isolated from antisera by immunoaffinity chromatography using antigens coupled to agarose beads. A proprietary elution process is used to dissociate lgG F(ab’) Fab H H H 2 H H antibodies from the antigen. Unconjugatedaffinity-purified antibodies are supplied sterile-filtered L L L L L in phosphate buffer without stabilisers or preservatives. Conjugatedaffinity-purified antibodies pepsin over are freeze-dried in phosphate buffer with stabilisers and sodium azide, with the exception of horseradish peroxidase conjugates, which do not contain a preservative. Alkaline phosphatase digestion + digestion conjugates are freeze-dried in Tris buffer with stabilisers and sodium azide. fragments Selection and Location of Affinity-Purified Secondary lgG Fab Fc Antibodies H H L L H papain L + Step 1. Affinity-purified secondary antibodies are offered in three different digestion forms. H H H Select from Whole IgG (pages 14-35), F(ab')2fragment (pages 36-45), or Fab fragment (pages 46-52) antibodies. Figure 1.Schematic representation of IgG fragments generated by enzymatic digestions. Figure 1. Whole IgG(pages 14-35) antibodies are isolated as intact molecules from antisera by immunoaffinity chromatography. They have an Fc portion and two antigen binding Fab cells in buffer containing 5% normal serum from the host species of the labelled secondary portions joined together by disulphide bonds (Figure 1) and therefore they are divalent. The antibody. To prevent capping, endocytosis and regeneration of Fc receptors on living cells, average molecular weight is reported to be about 160 kDa. The whole IgG form of antibodies incubate at 4°C in buffer containing 5% normal serum with sodium azide added to inhibit is suitable for the majority of immunodetection procedures and is the most cost effective. metabolism. F(ab')2fragment(pages 36-45) antibodies are generated by pepsin digestion of whole Caution: Never block with normal serum or IgG from the host species of the primary IgG antibodies to remove most of the Fc region while leaving intact some of the hinge region. antibody. If immunoglobulins in normal serum bind to the specimen of interest, they will be F(ab')2fragments have two antigen-binding Fab portions linked together by disulphide bonds recognised by the labelled secondary antibody, resulting in higher background. and therefore they are divalent. The average molecular weight is about 110 kDa. They are used for specific applications, such as to avoid binding of secondary antibodies to live cells Bovine serum albumin (BSA) and dry milk, both commonly used for blocking, may contain with Fc receptors or to Protein A or Protein G. bovine IgG. With the exception of Bovine Anti-Goat IgG, many secondary antibodies such as Anti-Bovine, Anti-Goat and Anti-Sheep will react strongly with bovine IgG. Therefore, use However, binding of primaryantibodies to Fc receptors also may occur if they are whole of BSA or dry milk for blocking or diluting these antibodies may significantly increase IgG antibodies, creating background regardless of the form of the secondaryantibody. To background and/or reduce antibody titre. For blocking, use normal serum (5% v/v) from the block whole IgG primary and secondary antibodies from binding to Fc receptors, incubate host species of the labelled secondary antibody. 4 Technical Information - Affinity-Purified Secondary Antibodies Ordering e-mail: [email protected] Technical e-mail: [email protected] Fab fragment(pages 46-52) antibodies are generated by papain digestion of whole IgG Step 4. Select the secondary antibody specificity under "Antibody Description". antibodies to remove the entire Fc portion, including the hinge region (Figure 1). These The following explanations of terms may assist in selecting the most appropriate antibody antibodies are monovalent, containing only a single antigen binding site. The molecular specificity. weight of Fab fragments is about 50 kDa. They can be used to block endogenous immunoglobulins on cells, tissues, or other surfaces and to block the exposed Note:Immunoglobulins from different species share similar structures, with similarities being immunoglobulins in multiple labelling experiments using primary antibodies from the same related to closeness in phylogeny. Antibodies against immunoglobulins from one species species. may cross-react with a number of other species unless they have been specifically adsorbed against the cross-reacting species. Antibodies that have been adsorbed against other In contrast, divalent (whole IgG or F(ab')2fragment) antibodies should not be used for species will contain "(min X...Sr Prot)" in the antibody description. blocking since they have two binding sites. After blocking, some of the binding sites would be available to capture the primary antibody introduced in a subsequent step, resulting in Anti-IgG (H+L) higher background and/or coincidental labelling. These antibodies react with both the heavy and light chains of the IgG molecule, i.e. with both the Fc and F(ab')2/Fab portions of IgG (Figure 1). Anti-IgG (H+L) antibodies also react Step 2. Select the secondary antibody. with other immunoglobulin classes (IgM, IgA, IgD, IgE) and subclasses since they all share The antibodies are listed alphabetically according to the host species of the primary the same light chains (either kappa or lambda). Anti-IgG (H+L) antibodies have broader antibody. For example, if the primary antibody is made in mouse, go to the "Anti-Mouse" epitope recognition than anti-fragment specific antibodies. They are suggested for all general section. immunodetection procedures. Note:Both anti-Syrian and anti-Armenian hamster secondary antibodies are listed under Anti-IgG, Fc/Fc fragment specific "Anti-Hamster". It is important to know in which strain of hamster the primary antibody γ These antibodies react with the Fc portion of the IgG heavy chain. They have been tested was produced since cross-reaction between the strains is not complete. by ELISA and/or adsorbed against Fab fragments. In some cases, they are additionally Step 3. Select the host species of the secondary antibody. tested and/or adsorbed to minimise cross-reactivity to IgM and/or IgA. In such cases (anti- Selection of the host species for a secondary antibody involves many considerations, human, anti-mouse and anti-rat), they are labelled "Anti-IgG, Fc". including but not limited to: 1) Antibodies from some host species may not be adsorbed γ against cross-reacting species of interest. Choose a host species with the required Caution:Anti-IgG, Fc fragment specific antibodies may not react equally with all adsorptions. 2) Host species compatibility. Some host species may not be compatible monoclonal primary antibγodies. For an anti-mouse IgG, Fc fragment specific antibody with with other species in multiple-labelling experiments. In general, all secondary antibodies balanced reactivity to four subclasses of IgG, select goγat anti-mouse IgG (subclasses for multiple labelling should come from the same host species. 3) Binding to Protein A 1+2a+2b+3), Fc fragment specific (min X Hu, Bov, Rb Sr Prot). and Protein G. Rabbit antibodies bind well to Protein A and Protein G, but goat and γ donkey antibodies bind better to Protein G. 4) Personal preference or experience. In our Anti-Mouse IgG, Fc Subclass specific γ experience there appears to be no host species-specific difference in the quality of These antibodies react with the Fc portion of the heavy chain of individual subclasses of secondary antibodies. mouse IgG. They have been tested by ELISA and adsorbed to minimise cross-reactivity to www.jireurope.com Telephone: +44 (0)1638 782616 Fax: +44 (0)1638 668462 5 Technical Information - Affinity-Purified Secondary Antibodies other subclasses, Fab fragments, IgM and a few other species of IgG. Anti-Mouse IgG, The following abbreviations are used in the parentheses: Fc subclass specific antibodies react with individual subclasses of mouse IgG. They are min X= minimal cross-reaction Ar Hms= Armenian Hamster Rb= Rabbit inteγnded for distinguishing between different subclasses of mouse IgG primary antibodies Bov= Bovine Sy Hms= Syrian Hamster Shp= Sheep in multiple labelling experiments, or for IgG subclass determination. Ck= Chicken Hrs= Horse Sw= Swine Gt= Goat Hu= Human Sr= Serum Anti-IgG, F(ab')2fragment specific GP= Guinea Pig Ms= Mouse Prot= Protein These antibodies react with the F(ab')2/Fab portion of IgG. They have been tested by ELISA and/or adsorbed against Fc fragments. They are not specific for IgG since they react with ML (multiple labelling) light chains and therefore also react with other immunoglobulin classes (IgA, IgM, IgD and Some antibodies are designated "ML" to emphasise their usefulness in multiple labelling in IgE) and subclasses sharing the same light chains. addition to single labelling. For further information see: "Multiple Labelling (ML) Using Labelled Secondary Antibodies"(page 7). (min X ... Sr Prot) Secondary antibodies against one species may cross-react with other species unless they Anti-Armenian Hamster IgG vs Anti-Syrian Hamster IgG have been specifically adsorbed against the other species. Antibodies with "(min X ... Sr Most hamster monoclonalantibodies are derived from Armenian hamster spleen cell-mouse Prot)" in the description have been tested and/or adsorbed against IgG and/or serum myeloma hybridomas. The IgG produced by these hybridomas is Armenian (not Syrian) proteins of those species indicated in the parentheses. They are recommended when the hamster IgG. Most commercially available polyclonalanti-hamster IgG antibodies have been presence of immunoglobulins from other species may lead to interfering cross-reactivities. anti-Syrian hamster IgG, which are not as effective as anti-Armenian hamster IgG in detecting However, caution should be exercised when considering antibodies that have been Armenian hamster IgG monoclonal antibodies. adsorbed against closely related species, since they have greatly reduced epitope recognition and may recognise some monoclonals poorly. For example, only use anti- Caution:Anti-Armenian Hamster IgG (H+L) (min X Bov, Hu, Ms, Rb, RatSr Prot) may not mouse IgG adsorbed against rat IgG to detect a mouse primary antibody in rat tissue recognise all Armenian hamster monoclonal antibodies, since it has been adsorbed against which contains endogenous rat immunoglobulins, or in a multiple labelling application closely related species (in bold). Therefore, it is better to use an antibody adsorbed against which includes a rat primary antibody. Use anti-mouse IgG notadsorbed against rat IgG fewer species, such as Anti-Armenian Hamster IgG (H+L) (min X Bov Sr Prot), except in to detect a mouse primary antibody in the absence of rat immunoglobulins. Two other those cases where Armenian hamster monoclonals need to be detected in the presence of examples of antibodies which have diminished epitope recognition after adsorption with mouse and/or rat immunoglobulins. closely related species are Anti-Rat IgG (min X ... Mouse ... Sr Prot) and Anti-Armenian Hamster IgG (min X ... Mouse, Rat ... Sr Prot). Refer to "ML (Multiple Labelling)" for further Step 5. Select the desired probe from those listed at the top of the product information. tables. For technical information about probes, see "Technical Information on Probes Conjugated to Affinity-Purified Antibodies and to Other Proteins"(page 8). 6 Technical Information - Affinity-Purified Secondary Antibodies Ordering e-mail: [email protected] Technical e-mail: [email protected] Step 6. Find the size and code number of the selected antibody by following Multiple Labelling (ML) Using Labelled Secondary the row until it intersects the column of the desired probe. Antibodies The top numbers in each cell refer to the unit size. The bottom nine-digit number is the catalogue code number. Selection of antibodies for simultaneous detection of more than one antigen depends on at least two important criteria: Step 7. Complete product description for ordering purposes. 1. Availability of secondary antibodies that do not recognise (a) one another (are derived from For a complete description of the product, please use the standard format to avoid mistakes the same host species), (b) other primary antibodies used in the assay system, (c) when placing an order. For example, a product with the code number 115-096-072 should immunoglobulins from other species present in the assay system, or (d) endogenous be described as in the key below. immunoglobulins present in the tissues or cells under investigation. 2. Use of probes (enzyme-reaction products, fluorophores, or electron-dense particles) that are well resolved. FITC-conjugated AffiniPure F(ab')2fragment Goat Anti-Mouse IgG, F(ab')2fragment specific (min X Hu, Bov, Hrs Sr Prot) The affinity-purified antibodies marked "ML" (multiple labelling) have been specifically A B C D E F G prepared to meet these criteria. One of many possible multiple-labelling protocols using these A. Description of the probe, if it is conjugated. If unconjugated, nothing is required here. reagents is shown in the following example. B. AffiniPure is our trade name for antibodies which have been isolated from antisera by immunoaffinity chromatography using antigens coupled to agarose beads. C. Form of the antibody - whole IgG, F(ab')2fragment, or Fab fragment antibody. Mouse Tissue Antigen A Mouse Tissue Antigen B Mouse Tissue Antigen C D. Name of the host species of the secondary antibody. E. Name of the species with which the antibody reacts. Step 1: 5% N. Donkey Serum to Step 4: 5% N. Donkey Serum to Step 7: 5% N. Donkey Serum block block (if needed) to block (if needed) F. Description of the antibody specificity. G. List of species against which the antibody has been adsorbed to minimise cross-reactivity. Step 2: Goat Anti-Antigen A Step 5: Rabbit Anti-Antigen B Step 8: Rat Anti-Antigen C Step 3: Probe l-conjugated Step 6: Probe ll-conjugated Step 9: Probe lll-conjugated Key to the format of product descriptions eg: FITC-conjugated AffiniPure F(ab')2fragment Donkey Anti-Goat IgG Donkey Anti-Rabbit IgG (H+L) Donkey Anti-Rat IgG Goat Anti-Mouse IgG, F(ab')2fragment specific (min X Hu, Bov, Hrs, Sr Prot) (H+L) (min X Ck, GP, Sy Hms, (min X Bov, Ck, Gt, GP, Sy Hms, (H+L) (min X Bov, Ck, Gt, GP, Hrs, Hu, Ms, Rb, RatSr Prot) Hrs, Hu, Ms, Rat, Shp Sr Prot) Sy Hms, Hrs, Hu, Ms, Rb, Shp Sr Prot) Note:Wash thoroughly after each step, including after blocking at step 1. With heavy or persistent background further blocking may be required at Steps 4 and 7. Do not dilute any antibody with normal serum or mix antibodies together to save time, which may result in immune complex formation which could increase background. In this example, the secondary antibodies used in Steps 3, 6 and 9 do not recognise each other since they are all made in donkey. They have been solid-phase adsorbed so that they do not recognise the other primary antibodies used in Steps 2, 5 and 8. Also, they do not react with endogenous mouse Ig, which may be present in the mouse tissue. For a review of multi-colour immunofluorescence labelling with confocal microscopy see Brelje, Wessendorf and Sorenson, "Multi-colour laser scanning confocal immunofluorescence microscopy: Practical application and limitations." In Cell Biological Applications of Confocal Microscopy (Methods in Cell Biology. vol.38). Ed. B. Matsumoto. Orlando, FL: Academic Press, Inc. 1993, pp. 98-181. www.jireurope.com Telephone: +44 (0)1638 782616 Fax: +44 (0)1638 668462 7 Technical Information - Probes Technical Information on Probes Conjugated to Fluorophore Excitation Peak Emission Peak (nm) Affinity-Purified Antibodies and to Other Proteins. Fluorescent Dyes DyLight 405 400 421 (for Phycoerythrin, PerCP and Allophycocyanin conjugates, see page 53). Aminomethylcoumarin, AMCA 350 450 The selection of fluorophores depends on: A. Instrument set-up. Examples include availability of light sources, filter sets and detection Cyanine, Cy2 492 510 systems. Alexa Fluor®488 493 519 Fluorescein, FITC/DTAF 492 520 B. Degree of colour separation desired for multiple labelling. For example, to achieve good colour separation from Alexa Fluor®488, choose a shorter wavelength emitting Indocarbocyanine, Cy3 550 570 fluorophore such as DyLight 405 and/or longer wavelength-emitting fluorophores such R-Phycoerythrin R-PE many, 488 580 as Rhodamine Red-X, Alexa Fluor®594, or Alexa Fluor®647. Rhodamine Red-X, RRX 570 590 Alexa Fluor®594 591 614 C. Sensitivity required. For example, Alexa Fluor®488 is brighter than FITC. Allophycocyanin APC many, 650 660 The following fifteen fluorescent dye conjugates (Figure 2, Table 1) are currently available Alexa Fluor®647 651 667 from Jackson ImmunoResearch. They cover the most commonly used excitation sources Indodicarbocyanine, Cy5 650 670 and filter sets from blue to infrared emissions. Peridinan-Chlorophyll-protein, PerCP many, 488 675 Alexa Fluor®Fluorescent Dyes Alexa Fluor®680 684 702 Alexa Fluor®fluorescent dyes are widely recognised as superior fluorescent dyes available Alexa Fluor®790 792 803 for conjugation. They are highly water soluble and remain fluorescent from pH 4 to pH 10. The detection level of any fluorophore-antibody conjugate depends on brightness and photostability of the dye; antibody activity, specificity and cross-reactivity; and the Table 1.Approximate peak wavelengths of excitation and emission for all fluorophore-conjugated, affinity-purified secondary antibodies offered by Jackson ImmunoResearch in order by increasing peak of emission. Approximate values optimal moles of dye per mole of antibody. These parameters have been researched for are given for purposes of comparing one fluorophore with another. Actual values may vary depending on the spectrofluorometer used in each laboratory. each dye conjugate to optimise the level of antibody detection and minimise background. Cyanine dyes (Cy2, Cy3 and Cy5) brighter in the non-polar environment than in an aqueous medium, resulting in less Among currently available fluorescent dyes, the cyanine dyes are better able to withstand acquisition time than other dyes in the confocal microscope. The advantage of using plastic the harsh dehydration and embedding conditions required for mounting sections in non- mounting media is better long-term storage for re-examination and retrieval of data at a polar plastic mounting media, such as DPX and Permount™. The cyanine dyes are later date. See pages 68-70 for a list of cyanine dye conjugates. 8 Technical Information - Probes Ordering e-mail: [email protected] Technical e-mail: [email protected] Figure 2.Excitation (left) and emission (right) spectra of all fluorophores offered by Jackson ImmunoResearch. The conjugates in order of increasing wavelength of fluorescence are DyLight 405 (violet), AMCA (dark blue), Cy2 (light blue), Alexa Fluor®488 (blue-green), FITC (hidden behind Alexa Fluor®488), Cy3 (yellow), R-PE Excitation Fluorescence CCA(adnlyyead55rx k) aA,( glPeFrpxeleuairenoC nkFrP®),lu , o(5 ldraA9®ovl4eet7t xne(9adrde0 e)Fd ,r(, )lb u,d loRaAorcht®lktlooe)dp6.d ah)4,my 7cA ionl(epcexyu aar pnRFlieenlu-d oh(-priX®din d6ke,8(n o0d rbo a(etngthgereiedny))d),, This figure illustrates the relative shape and position of each fluorophore in the peak region of its excitation and fluorescence emission following conjugation to antibodies. Quantitative comparisons should not be made since peak 0 0 heights have been normalised. All spectra were obtained 200 300 400 500 600 700 800 900 350 450 550 650 750 850 Wavelength (nm) Wavelength (nm) with an M-Series spectrofluorometer system from Photon Technology International, Inc. Figure 2. Figure 3.Excitation (left) and Emission (right) spectra of Alexa Fluor® conjugated affinity-purified secondary antibodies, streptavidin and purified proteins. The dyes are Alexa Fluor® 488 (blue), Alexa Fluor® 594 (green), Alexa Fluor® 647 (red), Alexa Fluor® 680 (pink) and Alexa Fluor®790 (black). Excitation Fluorescence fTaslhunhoodisur oflidfpglu huonorerroee tisl luccbsoeetnnr ajcutmeeg saa edttehme e iin ssr seitnilhoacentei v. p eep Qsaehukaaa kprn eetgih taiaeontingidv heopt ofs s citiotshimo aenvpx eoac firt ibaesetoaieocnnnhs normalised. All spectra were obtained with an M-Series spectrofluorometer system from Photon Technology International, Inc. 0 0 350 450 550 650 750 850 450 500 550 600 650 700 750 800 850 Wavelength (nm) Wavelength (nm) Figure 3. www.jireurope.com Telephone: +44 (0)1638 782616 Fax: +44 (0)1638 668462 9 Technical Information - Probes Figure 4.Excitation (left) and emission (right) spectra of Cy2 (green), Cy3 (red) and Cy5 (purple). Peak heights were normalised after the spectra were obtained with an M-series spectrofluorometer system from Photon Technology International, Inc. Excitation Fluorescence 0 0 300 350 400 450 500 550 600 650 700 400 450 500 550 600 650 700 750 Wavelength (nm) Wavelength (nm) Figure 4. Fluorescent Dyes in Order of Increasing Emission Wavelength cytometry, because emission filters generally used in flow cytometers are not optimal for A brief description of the characteristics of fluorophores found in this catalogue is found DyLight 405. DyLight 405 conjugates are the best choice for blue-fluorescing secondary below. The fluorophores are listed in order of increasing emission wavelength (Figure 2 and antibodies in multi-colour labelling protocols. See tables of Whole IgG Affinity-Purified Table 1). For Phycoerythrin, PerCP and Allophycocyanin see page 53. Antibodies (pages 14-35), Streptavidin (page 71) and Purified Proteins from Normal Serums (pages 80-89) for all DyLight 405 conjugates. DyLight 405-conjugated secondary antibodies are excited maximally at about 400 nm and fluoresce with a peak at about 421 nm (Figure 2 and Table 1). They are very bright AMCA (Aminomethylcoumarin Acetate)conjugates absorb light maximally around 350 and photostable, but their optimal use is limited to confocal microscopes equipped with a nm and fluoresce maximally around 450 nm (Figure 2 and Table 1). For fluorescence 405 nm laser and a 420 nm emission filter. Under these conditions, it is possible to microscopy, AMCA can be excited with a mercury lamp and observed using a UV filter set. perform effective 4-colour imaging with good colour separation, good photostability and Since blue fluorescence is not well detected by the human eye, AMCA-conjugated high sensitivity. The combination of DyLight 405, Alexa Fluor®488, Rhodamine Red-X and secondary antibodies should be used only with the most abundant antigens in multiple- Alexa Fluor®647 provides for maximum colour separation (Figure 5). Another 4-colour labelling experiments. Ways of improving the visibility of AMCA include dark adapting the dye combination, which may be equally effective but has slightly less colour separation, is eyes, using fluorite instead of glass objectives, avoiding mounting media that absorb UV DyLight 405, Alexa Fluor® 488, Cy3 and Alexa Fluor® 647. DyLight 405 is not light (such as plastic-based media) and capturing photographic images with blue-sensitive recommended for use in epifluorescence microscopes, nor is it recommended for flow film or CCD cameras. AMCA fades rapidly in conventional epifluorescence and confocal 10

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Affinity Purified Whole IgG, F(ab')2 Fragment and Monovalent Fab Fragment .. the row until it intersects the column of the desired probe. Applications of Confocal Microscopy (Methods in Cell Biology. vol. or double labelling with fluorescence imaged in a LiCor Odyssey imager .. 705-005-147.
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