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Neuromethods 140 Kjell Fuxe Dasiel O. Borroto-Escuela Editors Receptor-Receptor Interactions in the Central Nervous System N euromethods Series Editor: Wolfgang Walz University of Saskatchewan Saskatoon, Canada For further volumes: http://www.springer.com/series/7657 Receptor-Receptor Interactions in the Central Nervous System Edited by Kjell Fuxe Department of Neuroscience, Karolinska Institutet, Stockholm, Sweden Dasiel O. Borroto-Escuela Department of Neuroscience, Karolinska Institutet, Stockholm, Sweden Editors Kjell Fuxe Dasiel O. Borroto-Escuela Department of Neuroscience Department of Neuroscience Karolinska Institutet Karolinska Institutet Stockholm, Sweden Stockholm, Sweden ISSN 0893-2336 ISSN 1940-6045 (electronic) Neuromethods ISBN 978-1-4939-8575-3 ISBN 978-1-4939-8576-0 (eBook) https://doi.org/10.1007/978-1-4939-8576-0 Library of Congress Control Number: 2018947383 © Springer Science+Business Media, LLC, part of Springer Nature 2018 This work is subject to copyright. All rights are reserved by the Publisher, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilms or in any other physical way, and transmission or information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed. The use of general descriptive names, registered names, trademarks, service marks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. The publisher, the authors, and the editors are safe to assume that the advice and information in this book are believed to be true and accurate at the date of publication. Neither the publisher nor the authors or the editors give a warranty, express or implied, with respect to the material contained herein or for any errors or omissions that may have been made. The publisher remains neutral with regard to jurisdictional claims in published maps and institutional affiliations. Printed on acid-free paper This Humana Press imprint is published by the registered company Springer Science+Business Media, LLC part of Springer Nature. The registered company address is: 233 Spring Street, New York, NY 10013, U.S.A. Series Preface Experimental life sciences have two basic foundations: concepts and tools. The Neuromethods series focuses on the tools and techniques unique to the investigation of the nervous system and excitable cells. It will not, however, shortchange the concept side of things as care has been taken to integrate these tools within the context of the concepts and questions under investigation. In this way, the series is unique in that it not only collects protocols but also includes theoretical background information and critiques which led to the methods and their development. Thus, it gives the reader a better understanding of the origin of the techniques and their potential future development. The Neuromethods publishing program strikes a balance between recent and exciting developments like those concerning new ani- mal models of disease, imaging, in vivo methods, and more established techniques, includ- ing immunocytochemistry and electrophysiological technologies. New trainees in neurosciences still need a sound footing in these older methods in order to apply a critical approach to their results. Under the guidance of its founders, Alan Boulton and Glen Baker, the Neuromethods series has been a success since its first volume published through Humana Press in 1985. The series continues to flourish through many changes over the years. It is now published under the umbrella of Springer Protocols. While methods involving brain research have changed a lot since the series started, the publishing environment and technology have changed even more radically. Neuromethods has the distinct layout and style of the Springer Protocols pro- gram, designed specifically for readability and ease of reference in a laboratory setting. The careful application of methods is potentially the most important step in the process of scientific inquiry. In the past, new methodologies led the way in developing new disci- plines in the biological and medical sciences. For example, physiology emerged out of anatomy in the nineteenth century by harnessing new methods based on the newly discov- ered phenomenon of electricity. Nowadays, the relationships between disciplines and meth- ods are more complex. Methods are now widely shared between disciplines and research areas. New developments in electronic publishing make it possible for scientists who encounter new methods to quickly find sources of information electronically. The design of individual volumes and chapters in this series takes this new access technology into account. Springer Protocols makes it possible to download single protocols separately. In addition, Springer makes its print-on-demand technology available globally. A print copy can there- fore be acquired quickly and for a competitive price anywhere in the world. Saskatoon, Canada Wolfgang Walz v Preface G protein-coupled receptor (GPCR) can form homo- and heteroreceptor complexes with allosteric receptor–receptor interactions representing a novel molecular integrative mecha- nism in the central nervous system (CNS) [1, 2]. This takes place through direct physical interactions between co-expressed GPCRs either by physical association between the same receptor (homoreceptor complex) or different GPCR types (heteroreceptor complex) and with or without the participation of adapter proteins [3]. There are many impressive exam- ples demonstrating GPCR–GPCR heteromerization, which through allosteric receptor– receptor interactions alters the GPCR protomer recognition, signaling, and trafficking. These changes in the receptor protomers produce marked increases in diversity and bias of GPCR function. One emerging concept in neuropsychopharmacology is that a dysfunction of the allo- steric receptor–receptor interactions contributes to disease progression in mental and neu- rological disorders [4–10]. So far their stoichiometry and topology are unknown within the heteromer formed as well as the number of adapter proteins participating, including their architecture. The heteromers in the CNS should therefore be described as heteroreceptor complexes [2]. The overall architecture of the global GPCR heterodimer network shows that inter alia D2R are hub components forming more than ten heterodimer pairs [11]. It should be underlined that GPCR can also form complexes with ion channel receptors modulating, for instance, the synaptic glutamate and GABA receptor signaling [12–14]. GPCR-tyrosine receptor kinase (RTK) heteroreceptor complexes also exist [7, 15] in which the GPCR protomer can modulate the trophic function of the receptor tyrosine kinase (RTK) through allosteric modulation over the GPCR–RTK interface. Thus, GPCRs may modulate tro- phism and structural plasticity via allosteric modulation of RTK function in GPCR–RTK heteroreceptor complexes. The contributors to this book will cover the large number of methodologies used to unravel the receptor–receptor interactions in heteroreceptor complexes in the CNS from the molecular to the network level. The first three chapters deal with biochemical binding techniques, receptor autoradiog- raphy, and (35S)GTP gammaS binding in autoradiography which were used already in the early work. The biochemical binding experiments in CNS membrane preparations in the early 1980s led to the concept of receptor–receptor interactions in the plasma membrane (Chap. 1). The autoradiography makes possible an improved regional analysis and the use of more intact brain membranes present in the brain sections. This may help maintain the intramembrane receptor–receptor interaction (Chaps. 2 and 3). Chapter 4 deals with the superfused synaptosome technique to understand the function of the receptor–receptor interactions at the presynaptic level. Chapter 5 gives the protocols for dissociating and maintaining primary neurons from the hippocampus in order to study the transactivation of the FGFR1 by muscarinic cholinergic receptors. Methods to determine neurite out- growth and protein phosphorylation are also described. They are needed to determine the function of this RTK–GPCR interaction (Chap. 5). Protocols for electrophysiological vii viii Preface approaches to determine GPCR–RTK interactions are found in Chap. 6. Patch-clamp protocols are provided to analyze the GPCR–RTK interaction. At the network level, the protocols for the microdialysis technique are provided used to study the role of the receptor–receptor interactions in the brain circuits of the awake freely moving rat (Chap. 7). In Chap. 8, behavioral methods are given to determine the role of receptor–receptor interactions in fear and anxiety at the network level. The methods to use small interference RNA knockdown in rats to determine the function of receptor–receptor interactions in anxiety- and depression-like behaviors are provided in Chap. 9. Protocols for the use of double fluorescent knock-in mice are provided to investigate subcellular distribu- tion of endogenous mu-delta opioid heteromers in primary hippocampal cultures from this mouse model (Chap. 10). Their coexistence in various brain regions can also be elegantly demonstrated. Moving into biochemical methods Chap. 11 gives the protocols for coimmunoprecipita- tion (Co-IP) and protein affinity purification assays to determine D2R-associated protein complexes. Their D2R–protein interactions like D2R–Disc1 interactions play a significant role in regulating the D2R signaling. In Chap. 12, the protocols for BRET are introduced to determine receptor heterodimers in cellular models. Protocols are also given for assays to establish the existence of heterotrimers. These assays build on the use of a combination of BRET and bimolecular fluorescence complementation (BiFc) or of a sequential BRET-F RET (SRET) procedure. The restraints of the energy transfer assays are discussed and how they can be complemented by in situ proximity ligation assay (PLA). A more detailed analysis of a dimerization-induced BiFc is given in Chap. 13 introducing a high-resolution approach using confocal laser microscopy vs a low-resolution approach using automated cell imaging with a multi-mode plate reader. In Chap. 14, the protocols for flow cytometry- based FRET (fcFRET) are given. This technique will allow the detection and quantification of dynamic receptor–receptor interactions based on the analysis of the fc-FRET. In Chap. 15, a novel strategy is given to study GPCR dimerization in living cells. It is a protein complementation assay involving a reconstitution of a luminescent protein, a so- called nanoluciferase. Complementary nanoluciferase fragments are fused to a receptor pair, which can combine to form a reporter if dimerization takes place. Another new method is provided in Chap. 16 to study GPCR dimerization based on proximity biotinylation. Its advantages and disadvantages versus other methods are discussed. In Chap. 17, a new method is presented for the conformational profiling of GPCRs using the fluorescein arsen- ical hairpin (FIAsH) binders as energy acceptors with the tetracysteine binding tag in dif- ferent positions within the intracellular domains of the 5-HT2A receptor. This method uses a FIAsH-BRET approach with the Renilla luciferase fused to the C-terminal tail of the 5-HT2A receptor. In Chap. 18, a detailed description of the GPCR-hetnet is given. The G protein-c oupled receptor heterocomplex network database (GPCR-hetnet) is a database designed to store information on GPCR heteroreceptor complexes and their allosteric receptor–receptor inter- actions. It is an expert-authored and peer-reviewed database of well-documented GPCR– GPCR, GPCR–receptor tyrosine kinase, and GPCR–ionotropic receptor/ligand-g ated ion channel interactions. This chapter describes in a basic protocol how to use, navigate, and browse through the GPCR-hetnet database to identify the clusters in which a receptor protomer of interest is involved, while further applicability is also described and introduced. In Chap. 19, detailed protocols are given for the use of the in situ proximity ligation assay in the analysis of homo- and heteroreceptor complexes in the CNS. It involves the use of confocal laser microscopy and quantitation of the density of PLA-positive clusters per Preface ix cell in the sampled fields of various brain regions. Protocols for demonstrating the brain functions of receptor oligomers are presented in Chap. 20 using receptor interface interacting peptides. The D1R-NMDAR heteromer is given as an example. The book ends with a description of the methodology to study GPCR dimers and higher order oligomers at the single-molecule level through super-resolution level (Chap. 21). Photoactivated localization microscopy using photoactivatable dyes was employed to visualize the spatial organization of the homo-heteroreceptor complexes and perform quantitation of their composition in terms of monomers, dimers, trimers, etc. Stockholm, Sweden Kjell Fuxe Dasiel O. Borroto-Escuela References 1. Fuxe K, Agnati LF, Benfenati F, Celani M, Zini I, Zoli M, Mutt V (1983) Evidence for the existence of receptor–receptor interactions in the central nervous system. Studies on the regulation of monoamine receptors by neuropeptides. J Neural Transm Suppl 18:165–179 2. Fuxe K, Borroto-Escuela DO (2016) Heteroreceptor complexes and their allosteric receptor-receptor interactions as a novel biological principle for integration of com- munication in the CNS: targets for drug development. Neuropsychopharmacology 41(1):380–382. https://doi.org/10.1038/npp.2015.244 3. Borroto-Escuela DO, Wydra K, Pintsuk J, Narvaez M, Corrales F, Zaniewska M, Agnati LF, Franco R, Tanganelli S, Ferraro L, Filip M, Fuxe K (2016) Understanding the functional plasticity in neural networks of the basal ganglia in cocaine use disorder: a role for allosteric receptor-receptor interactions in A2A-D2 heteroreceptor com- plexes. Neural Plast 2016:4827268. https://doi.org/10.1155/2016/4827268 4. Borroto-Escuela DO, Narvaez M, Wydra K, Pintsuk J, Pinton L, Jimenez-Beristain A, Di Palma M, Jastrzebska J, Filip M, Fuxe K (2017) Cocaine self-administration specifi- cally increases A2AR-D2R and D2R-sigma1R heteroreceptor complexes in the rat nucleus accumbens shell. Relevance for cocaine use disorder. Pharmacol Biochem Behav 155:24–31. https://doi.org/10.1016/j.pbb.2017.03.003 5. Borroto-Escuela DO, Li X, Tarakanov AO, Savelli D, Narvaez M, Shumilov K, Andrade-Talavera Y, Jimenez-Beristain A, Pomierny B, Diaz-Cabiale Z, Cuppini R, Ambrogini P, Lindskog M, Fuxe K (2017) Existence of brain 5-HT1A-5-HT2A Isoreceptor complexes with antagonistic allosteric receptor-receptor interactions regu- lating 5-HT1A Receptor recognition. ACS Omega 2(8):4779–4789. https://doi. org/10.1021/acsomega.7b00629 6. Borroto-Escuela DO, DuPont CM, Li X, Savelli D, Lattanzi D, Srivastava I, Narvaez M, Di Palma M, Barbieri E, Andrade-Talavera Y, Cuppini R, Odagaki Y, Palkovits M, Ambrogini P, Lindskog M, Fuxe K (2017) Disturbances in the FGFR1-5-HT1A het- eroreceptor complexes in the Raphe-hippocampal 5-HT System develop in a genetic rat model of depression. Front Cell Neurosci 11:309. https://doi.org/10.3389/ fncel.2017.00309 x Preface 7. Borroto-Escuela DO, Tarakanov AO, Fuxe K (2016) FGFR1-5-HT1A heteroreceptor complexes: implications for understanding and treating major depression. Trends Neurosci 39(1):5–15. https://doi.org/10.1016/j.tins.2015.11.003 8. Borroto-Escuela DO, Wydra K, Ferraro L, Rivera A, Filip M, Fuxe K (2015) Role of D2-like heteroreceptor complexes in the effects of cocaine, morphine and hallucinogens. In: Preedy V (ed) Neuropathology of drug addictions and substance misuse, vol 1. Elsevier, London. pp 93–101. https://doi.org/10.15379/2409-3564.2015.02.01.5 9. Fuxe K, Borroto-Escuela DO, Tarakanov AO, Romero-Fernandez W, Ferraro L, Tanganelli S, Perez-Alea M, Di Palma M, Agnati LF (2014) Dopamine D2 heterorecep- tor complexes and their receptor-receptor interactions in ventral striatum: novel targets for antipsychotic drugs. Prog Brain Res 211:113–139. https://doi.org/10.1016/ B978-0-444-63425-2.00005-2 10. Fuxe K, Guidolin D, Agnati LF, Borroto-Escuela DO (2015) Dopamine heterorecep- tor complexes as therapeutic targets in Parkinson’s disease. Expert Opin Ther Targets 19(3):377–398. https://doi.org/10.1517/14728222.2014.981529 11. Borroto-Escuela DO, Brito I, Romero-Fernandez W, Di Palma M, Oflijan J, Skieterska K, Duchou J, Van Craenenbroeck K, Suarez-Boomgaard D, Rivera A, Guidolin D, Agnati LF, Fuxe K (2014) The G protein-coupled receptor heterodimer network (GPCR-HetNet) and its hub components. Int J Mol Sci 15(5):8570–8590. https://doi.org/10.3390/ijms15058570 12. Li S, Wong AH, Liu F (2014) Ligand-gated ion channel interacting proteins and their role in neuroprotection. Front Cell Neurosci 8:125. https://doi.org/10.3389/ fncel.2014.00125 13. Wang M, Lee FJ, Liu F (2008) Dopamine receptor interacting proteins (DRIPs) of dopamine D1-like receptors in the central nervous system. Mol Cells 25(2):149–157 14. Lavine N, Ethier N, Oak JN, Pei L, Liu F, Trieu P, Rebois RV, Bouvier M, Hebert TE, Van Tol HH (2002) G protein-coupled receptors form stable complexes with inwardly rectifying potassium channels and adenylyl cyclase. J Biol Chem 277(48):46010–46019. https://doi.org/10.1074/jbc.M205035200 15. Flajolet M, Wang Z, Futter M, Shen W, Nuangchamnong N, Bendor J, Wallach I, Nairn AC, Surmeier DJ, Greengard P (2008) FGF acts as a co-transmitter through adenosine A(2A) receptor to regulate synaptic plasticity. Nat Neurosci 11(12):1402–1409. https://doi.org/10.1038/nn.2216 Contents Series Preface . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . v Preface . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . vii Contributors . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . xv 1 Analysis and Quantification of GPCR Allosteric Receptor–Receptor Interactions Using Radioligand Binding Assays: The A2AR-D2R Heteroreceptor Complex Example . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 Dasiel O. Borroto-Escuela, Miguel Pérez de la Mora, Michele Zoli, Fabio Benfenati, Manuel Narvaez, Alicia Rivera, Zaida Díaz-Cabiale, Sarah Beggiato, Luca Ferraro, Sergio Tanganelli, Patrizia Ambrogini, Malgorzata Filip, Fang Liu, Rafael Franco, Luigi F. Agnati, and Kjell Fuxe 2 Analysis and Quantification of GPCR Heteroreceptor Complexes and Their Allosteric Receptor–Receptor Interactions Using Radioligand Binding Autoradiography . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 15 Manuel Narvaez, Fidel Corrales, Ismel Brito, Ismael Valladolid-Acebes, Kjell Fuxe, and Dasiel O. Borroto-Escuela 3 On the Study of D R-MOR Receptor–Receptor Interaction in the Rat 4 Caudate Putamen: Relevance on Morphine Addiction . . . . . . . . . . . . . . . . . . . . 25 Alicia Rivera, Alejandra Valderrama-Carvajal, Diana Suárez-Boomgaard, Kirill Shumilov, M. Ángeles Real, Kjell Fuxe, and Belén Gago 4 Use of Superfused Synaptosomes to Understand the Role of Receptor–Receptor Interactions as Integrative Mechanisms in Nerve Terminals from Selected Brain Region . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 41 Sarah Beggiato, Sergio Tanganelli, Tiziana Antonelli, Maria Cristina Tomasini, Kjell Fuxe, Dasiel O. Borroto-Escuela, and Luca Ferraro 5 Detection of Fibroblast Growth Factor Receptor 1 (FGFR1) Transactivation by Muscarinic Acetylcholine Receptors (mAChRs) in Primary Neuronal Hippocampal Cultures Through Use of Biochemical and Morphological Approaches . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 57 Valentina Di Liberto, Giuseppa Mudó, Dasiel O. Borroto-Escuela, Kjell Fuxe, and Natale Belluardo 6 Electrophysiological Approach to GPCR–RTK Interaction Study in Hippocampus of Adult Rats . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 71 Davide Lattanzi, David Savelli, Michael Di Palma, Stefano Sartini, Silvia Eusebi, Dasiel O. Borroto-Escuela, Riccardo Cuppini, Kjell Fuxe, and Patrizia Ambrogini xi

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