P ULMONARY INFECTION IN THE IMMUNOCOMPROMISED PATIENT Pulmonary Infection in the Immunocompromised Patient: Strategies for Managemen Edited by Carlos Agustí and Antoni Torres © 2009 John Wiley & Sons, Ltd. ISBN: 978-0-470-31957-4 P ULMONARY INFECTION IN THE IMMUNOCOMPROMISED PATIENT STRATEGIES FOR MANAGEMENT Editors Carlos Agustı´ and Antoni Torres CapdeServeidePneumologiaiAlle`rgiaRespirato`riaHospitalCl´ınicdeBarcelona, Barcelona,Spain Thiseditionfirstpublished2009 #2009JohnWiley&Sons,Ltd Wiley-BlackwellisanimprintofJohnWiley&Sons,formedbythemergerofWiley’sglobalScientific,TechnicalandMedical businesswithBlackwellPublishing. 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LibraryofCongressCataloguing-in-PublicationData Pulmonaryinfectionintheimmuno-compromisedpatient:strategiesformanagement/editedbyCarlos AgustiandAntoniTorres. p.;cm. Includesbibliographicalreferencesandindex. ISBN978-0-470-31957-4(cloth) 1. Respiratoryinfections.2. Lungs–Infections.3. Immunosuppression–Complications. I.Agusti,Carlos. II.TorresMarti,A.(Antoni) [DNLM:1. LungDiseases–complications.2. OpportunisticInfections–complications.3. ImmunocompromisedHost. 4. LungDiseases–therapy.5. OpportunisticInfections–therapy.WF600P9834952009] RC740.P832009 616.204–dc22 2008036179 ISBN978-0-470-31957-4 AcataloguerecordforthisbookisavailablefromtheBritishLibrary. Setin10.5/12.5ptTimesbyThomsonDigital,Noida,India PrintedinSingaporebyMarkonoPrintMediaPte.Ltd. Firstprinting–2009 Contents Preface ix List of Contributors xi 1 Lung Immune Defences in the Immunosuppressed Patient 1 Naimish Patel and Henry Koziel 1.1 Introduction 1 1.2 Hostdefencefunctioninhealth 1 1.3 Hostdefencefunctioninselectimmunocompromised patients 7 1.4 Summaryandfuturedirectionsforthisfield 17 2 Microbiological Diagnosis of Respiratory Infections in the Immunocompromised 29 Margareta Ieven 2.1 Introduction 29 2.2 HIVinfectionandMycobacteriumtuberculosis 30 2.3 HIVinfectionandnontuberculousmycobacteria(NTM) 33 2.4 HIVandPneumocystisjirovecii 34 2.5 Infectionsintransplant patientsorotherimmunodeficiencies 35 2.6 Concluding remarks 45 3 Diagnosis of Pneumonia in Immunocompromised Patient 53 Robert P. Baughman and Elyse E. Lower 3.1 Introduction 53 3.2 Clinicalassessment 55 3.3 Bloodcultures 60 3.4 Sputum 60 3.5 Endotrachealaspirate 61 3.6 Nonbronchoscopicbronchoalveolarlavage 63 3.7 Protectedbrushsample(PBS) 64 3.8 Bronchoalveolarlavage(BAL) 65 3.9 Transbronchialbiopsy(TBB) 71 3.10 Surgicallungbiopsy(SLB) 73 3.11 Sampleprocessing 74 3.12 Clinicalapproachtopulmonaryinfiltrates inimmunosuppressedpatient 76 3.13 Conclusion 80 vi CONTENTS 4 Pulmonary Imaging in Immunocompromised Patients 95 (cid:1) Tomas Franquet 4.1 Pulmonaryinfectionsinimmunocompromisedpatient 95 4.2 Respiratory infections 100 4.3 Interventionalproceduresinpatientswithpneumonia 111 4.4 Summary 113 5 Pulmonary Infections in HIV Patients in the Highly Active Antiretroviral Therapy Era 117 Natividad Benito and Asuncio´n Moreno-Camacho 5.1 Introduction 117 5.2 Epidemologyandetiology 118 5.3 Diagnosis 128 5.4 Prognosis 131 5.5 Conclusions 132 6 Neutropenia 143 Maria J. Ru¨ping, Jo¨rg J. Vehreschild, Santiago Ewig and Oliver A. Cornely 6.1 Introduction 143 6.2 Managementoftheneutropenicpatient 149 6.3 Specificinfectiousdiseases 160 7 General Management of Suspected Pneumonia in the Solid Organ Transplant Patient 197 Andrew F. Shorr 7.1 Introduction 197 7.2 Epidemiology 197 7.3 Differentialdiagnosisandnon-infectiouscomplications 199 7.4 Diagnosticapproach 201 7.5 Conclusion 210 8 Respiratory Infections Following Haematopoietic Stem Cell Transplantation 213 Ayman O. Soubani 8.1 ImmunesystemrecoveryafterHSCT 215 8.2 Bacterialpneumonia 217 8.3 Invasivepulmonaryaspergillosis 222 8.4 Cytomegalovirus 232 8.5 Communityrespiratoryviruses 235 8.6 Non-infectiouspulmonarycomplications 239 8.7 Conclusion 241 CONTENTS vii 9 Chronic Non-infectious Pulmonary Complications in Haematopoietic Stem Cell Transplantation 257 Bekele Afessa and Steve G. Peters 9.1 Introduction 257 9.2 BronchiolitisObliterans(BO) 260 9.3 BronchiolitisObliteransorganizing pneumonia(BOOP) 263 9.4 Idiopathicpneumoniasyndrome(IPS) 265 9.5 Diffusealveolarhaemorrhage(DAH) 267 9.6 Peri-engraftment respiratorydistress syndrome(PERDS) 269 9.7 Delayedpulmonarytoxicitysyndrome(DPTS) 270 9.8 Pulmonarycytolyticthrombi(PCT) 271 9.9 Othernon-infectiouspulmonarycomplications 272 9.10 Summary 274 10 Pulmonary Infections in Patients on Chronic Glucocorticoid Treatment 283 Ana Ran˜o´ and Carlos Agust´ı 10.1 Introduction 283 10.2 Associated inflammatoryresponseinpneumonia 283 10.3 Glucocorticoids: Mechanismsofaction 284 10.4 Glucocorticoidtherapy inclinicalpractice 286 10.5 Diagnosticapproach 296 10.6 Empiricaltreatmentofsuspectedpneumoniainpatients receivingchronicGCtherapy 298 10.7 Prognosis 298 10.8 Conclusions 299 11 Intensive Care Management in the Immunocompromised Patient with Pulmonary Infiltrates 305 Gilles Hilbert, Didier Gruson and Frederic Vargas 11.1 Introduction 305 11.2 Invasiveventilation 306 11.3 RationaleforNIV 307 11.4 Mechanisms ofimprovementwithNIV inimmunocompromisedpatients withacute respiratoryfailure 308 11.5 Clinicalstudies 309 11.6 Equipment andtechniques:particularities inimmunocompromisedpatients 316 11.7 Predictive factorsofNIVoutcome 319 11.8 Conclusions 320 viii CONTENTS 12 Current Strategies and Future Directions in Antibacterial Treatment 325 Jan Jelrik Oosterheert and Andy I.M. Hoepelman 12.1 Introduction 325 12.2 Farmacokineticsandfarmacodynamics 325 12.3 Antibacterialtreatmentoptions 331 12.4 Resistance 336 12.5 HIVrelatedbacterialpulmonaryinfections 339 12.6 Lengthoftreatment 342 12.7 Conclusions 343 13 Current Strategies in the Treatment of Fungal Infections in the Intensive Care Unit Setting 349 Mitchell Goldman and George A. Sarosi 13.1 Introduction 349 13.2 Antifungaltherapies 350 13.3 Theendemicfungiinthecriticalcareunit 351 13.4 Otheryeastinfectionsinthecriticalcareunit 358 13.5 Invasivemouldinfectionsinthecriticalcareunit 363 13.6 Summary 375 14 Current Strategies and Future Directions in Cytomegalovirus (CMV) Pneumonitis 383 (cid:1) Julio C. Medina Presentado and Jose M. Aguado 14.1 EffectsofCMVinfectioninimmunocompromisedpatients 383 14.2 PathophysiologyofCMVpneumonitis 384 14.3 RiskfactorsforCMVpneumonitis 385 14.4 PulmonarymanifestationsofCMVinfection 386 14.5 IndirectrespiratoryeffectsofCMVinfection 387 14.6 Diagnosis ofCMV pneumonitis 387 14.7 AntiviralagentsagainstCMV 388 14.8 TreatmentofCMVpneumonia 390 14.9 PreventionofCMVpneumonia 393 15 Antiviral Agents against Respiratory Viruses 401 Michael G. Ison 15.1 M2inhibitors 402 15.2 Neuraminidaseinhibitors 407 15.3 Cidofovir 412 15.4 Ribavirin 414 15.5 Investigationalagents 417 Index 429 Preface The number of immunocompromised patients has increased over the last decade. Improvementsinsolid-organandhaematopoieticstemcelltransplantationtechniques, the expanded use of chemotherapic treatments and glucocorticoids use, and the appearance of new immunomodulatory therapies are some of the reasons that justify thisincrease.Thesuccessofthedifferenttransplanttechniqueshasgeneratedagreat dealofinterestinthemanagementofimmunocompromisedpatientsamongclinicians andbasicscientists.Therecognitionandmanagementofpulmonarycomplicationsthat resultfromimmunosuppressionisachallengingtask.Thelungsmaybeinjureddirectly throughaninfectiousortoxicinsult.Conversely,lungdiseasemayresultasasecondary event.Pulmonarycomplicationsinthesepatientsrequireamultidisciplinaryapproach thatofteninvolvesdifferentspecialists.Thisincludesanappreciationoftheepidemi- ologyofpost-transplantpulmonarycomplications,thedifferentialdiagnosesforthese processes, the appropriate diagnostic explorations, and the specific treatments and potential interactions. Our goals in this book are to provide an integrated discussion of progress in a comprehensivefashion.Thegeneralaspectsofthelungimmunedefencesarereviewed by Drs Patel and Koziel. Microbiological diagnosis and respiratory sampling in this population are a very important issues, related to the adequacy of treatment and mortality. Dr Ieven and Dr Baughman have reviewed both chapters in depth. The radiological approach to the diagnosis of respiratory complications is of particular importanceandDrFranquetpresentsthedifferenttoolsthatwecurrentlyhaveinour hands. The remaining chapters of the book are dedicated to the review of respiratory infections regarding different types of immunosuppression: HIV infected patients, neutropenia, haematopoietic stem cell transplantation and chronic steroid treatment. Finally, intensive care management, antibacterial, antifungal and antiviral treatments are updated by experts in these subjects. Asinanymulti-authorbook,thesuccessoftheendeavourrelatestothecommitment andcreativityofthecollaboratingauthors;weareextremelythankfulforthehardand carefulworkofeachofourcontributors.Wewouldalsoliketothankourcolleaguesat John Wiley & Sons, Ltd who provided outstanding support for this project. Carlos Agust´ı Antoni Torres Contributors Bekele Afessa Santiago Ewig DivisionofPulmonaryandCriticalCare ThoraxzentrumRuhrgebiet,Klinikenfu€r Medicine,MayoClinicCollegeofMedicine, PneumologieundInfektiologie, 200FirstST,Rochester, Evangelisches KrankenhausHerneund MN55905,USA Augusta-Kranken-Anstalt, Bergstrasse26, Email:[email protected] 44791Bochum,Germany Email:[email protected] Jose´ M. Aguado UnitofInfectiousDiseases,University Toma´s Franquet Hospital12deOctubre,Av. deAndaluc´ıa ChiefofThoracicImagingSection, Km.5,400.28041Madrid,Spain DepartmentofRadiology,HospitaldeSant Email:[email protected] Pau,St.AntoniMariaClaret,167,08025, Barcelona,Spain;andDepartmentof Carlos Agust´ı Radiology,UniversitatAuto´nomaof InstitutClinic dePneumologiaICPCT, Barcelona,Barcelona,Spain HospitalClinic,C/Villarroel,170,08036 Email:[email protected] Barcelona,Spain Email:[email protected] Mitchell Goldman DivisionofInfectiousDiseases,Indiana Robert P. Baughman University SchoolofMedicine,Wishard UniversityofCincinnatiMedicalCenter, MemorialHospital(RoomOPW430), 1001Holmes,EdenAvenue,Cincinnati, 1001W.10thStreet,IN46202,USA OH45267-0565, USA Email:[email protected] Email:[email protected] Didier Gruson Natividad Benito DivisionofMedicalIntensiveCare, InfectiousDiseasesUnit,SantPauHospital, University HospitalBordeaux,Hoˆpital SantAntoniMariaClaret167,08025 Pellegrin,PlaceAmelieRaba-L(cid:1)eon, Barcelona.Spain F-33076BordeauxCedex,France Email:[email protected] Oliver A. Cornely Gilles Hilbert UniklinikKo€ln,KlinikIfu€rInnereMedizin, DivisionofMedicalIntensiveCare, KlinischesStudienzentrum, Schwerpunkt University HospitalBordeaux,Hoˆpital InfektiologieII,BachemerStrasse86, Pellegrin,PlaceAmelieRaba-L(cid:1)eon,F 33076 50931Ko€ln,Germany Bordeaux Cedex,France Email:[email protected] Email:[email protected] xii CONTRIBUTORS Andy I.M. Hoepelman Jan Jelrik Oosterheert UniversityMedicalCenterUtrecht, UniversityMedicalCenterUtrecht, DivisionofMedicine,Department DivisionofMedicine,Department ofInternalMedicineandInfectious ofInternalMedicineandInfectious Diseases,POBox85500, Diseases,POBox85500,3508 3508GA Utrecht,TheNetherlands GAUtrecht,TheNetherlands Email:[email protected] Email:[email protected] Margareta Ieven Naimish Patel DepartmentofMedicalMicrobiology, DivisionofPulmonary,CriticalCare FacultyofMedicine,UniversityofAntwerp, andSleepMedicine,KirsteinHall,Room Universiteitsplein1S3, E/KSB-23,BethIsraelDeaconessMedical B-2610,Wilrijk,Belgium CenterandHarvardMedical Email:[email protected] School,330BrooklineAvenue, Boston,MA02215,USA Michael G. Ison NorthwesternUniversityFeinbergSchool ofMedicine,DivisionsofInfectiousDiseases Steve G. Peters &OrganTransplantation,Transplant DivisionofPulmonaryandCriticalCare &ImmunocompromisedHostInfectious Medicine,MayoClinicCollegeofMedicine, DiseasesService,676N. StreetClair 200FirstSt,Rochester, StreetSuite200,Chicago,IL60611,USA MN55905,USA Email:[email protected] Email:[email protected] Henry Koziel DivisionofPulmonary,CriticalCareand Julio C. Medina Presentado SleepMedicine,KirsteinHall, RoomE/KSB- C(cid:1)atedradeEnfermedadesInfecciosas, 23,BethIsraelDeaconessMedicalCenter UniversidaddelaRepu´blica, andHarvardMedicalSchool,330Brookline Uruguay Avenue,Boston, MA02215,USA Email:[email protected] Ana Ran˜o´ InstitutClinicdePneumologiaICPCT, Elyse E. Lower HospitalClinic,C/Villarroel,170, UniversityofCincinnatiMedicalCenter, 08036Barcelona,Spain 1001Holmes,EdenAvenue,Cincinnati,OH 45267-0565,USA Maria J. Ru¨ping Asuncio´n Moreno-Camacho UniklinikKo€ln,KlinikIfu€rInnereMedizin, InfectiousDiseasesService, KlinischesStudienzentrum, Schwerpunkt HospitalClinic,Villarroel170, InfektiologieII,BachemerStrasse86, 08036-Barcelona,Spain 50931Ko€ln,Germany Email:[email protected] Email:[email protected]