Primary Productivity and Biogeochemical Cycles in the Sea ENVIRONMENTAL SCIENCE RESEARCH Series Editor: Herbert S. Rosenkranz Department of Environmental and Occupational Health Graduate School of Public Health University of Pittsburgh 130 DeSoto Street Pittsburgh, Pennsylvania Founding Editor: Alexander Hollaender Recent Volumes in this Series Volume 35 -ENVIRONMENTAL RADON Edited by C. Richard Cothern and James E. Smith, Jr. Volume 36-SHORT-TERM BIOASSAYS IN THE ANALYSIS OF COMPLEX ENVIRONMENTAL MIXTURES V Edited by Shahbeg S. Sandhu, David M. DeMarini, Marc J. Mass, Martha M. Moore, and Judy L. Mumford Volume37-HAZARDS,DECONTAMINATION,ANDREPLACEMENTOFPCB: A Comprehensive Guide Edited by Jean-Pierre Crine Volume 38-/N SITU EVALUATION OF BIOLOGICAL HAZARDS OF ENVIRONMENTAL POLLUTANTS Edited by Shahbeg S. Sandhu, William R. Lower, Frederick J. de Serres, William A. Suk, and Raymond R. Tice Volume 39-GENETIC TOXICOLOGY OF COMPLEX MIXTURES Edited by Michael D. Waters, F. Bernard Daniel, Joellen Lewtas, Martha M. Moore, and Stephen Nesnow Volume 40-NITROARENES: Occurrence, Metabolism, and Biological Impact Edited by Paul C. Howard, Stephen S. Hecht, and Frederick A. Beland Volume 41-ENVIRONMENTAL BIOTECHNOLOGY FOR WASTE TREATMENT Edited by Gary S. Sayler, Robert Fox, and James W. Blackburn Volume 42-CHEMISTRY FOR THE PROTECTION OF THE ENVIRONMENT Edited by L. Pawlowski, W. J. Lacy, and J. J. Dlugosz Volume 43 - PRIMARY PRODUCTIVITY AND BIOGEOCHEMICAL CYCLES IN THE SEA Edited by Paul G. Falkowski and Avril D. Woodhead A Continuation Order Plan is available for this series. A continuation order will bring delivery of each new volume immediately upon publication. Volumes are billed only upon actual shipment. For further information please contact the publisher. Primary Productivity and Biogeochemical Cycles in the Sea Edited by Paul G. Falkowski and Avril D. Woodhead Brookhaven National Laboratory Upton, New York Technical Editor: Katherine Vivirito Brookhaven National Laboratory Upton, New York SPRINGER SCIENCE+ BUSINESS MEDIA, LLC Library of Congress Cataloging-in-Publication Data Primary productivity and biogeochemica 1 cycles in the sea / edited by Paul G. Falkowskl and AvMl D. Woodhead ; technical editor, Katherine Vivirito. p. cm. — (Environmental science research ; v. 43) "Proceedings of the Conference on Primary Productivity and Biogeochemica1 Cycles 1n the Sea, held June 2-6, 1991, at Brookhaven National Laboratory, Upton, New York"—T.p. verso. Includes bibliographical references and index. ISBN 978-1-4899-0764-6 1. Marine productivity—Congresses. 2. Biogeochemical cycles- -Congresses. I. Falkowskl, Paul G. II. Woodhead, Avril D. III. Conference on Primary Productivity and Biogeochemica! Cycles in the Sea (1991 : Brookhaven National Laboratory) IV. Series. QH91.8.M34P75 1992 574.5'2636—dc20 92-3441 CIP ISBN 978-1-4899-0764-6 ISBN 978-1-4899-0762-2 (eBook) DOI 10.1007/978-1-4899-0762-2 Proceedings of the conference on Primary Productivity and Biogeochemical Cycles in the Sea, held June 2-6, 1991, at Brookhaven National Laboratory, Upton, New York © Springer Science+Business Media New York 1992 Originally published by Plenum Press, New York in 1992 Softcover reprint of the hardcover 1st edition 1992 All rights reserved No part of this book may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, electronic, mechanical, photocopying, microfilming, recording, or otherwise, without written permission from the Publisher PREFACE Biological processes in the oceans play a crucial role in regulating the fluxes of many important elements such as carbon, nitrogen, sulfur, oxygen, phosphorus, and silicon. As we come to the end of the 20th century, oceanographers have increasingly focussed on how these elements are cycled within the ocean, the interdependencies of these cycles, and the effect of the cycle on the composition of the earth's atmosphere and climate. Many techniques and tools have been developed or adapted over the past decade to help in this effort. These include satellite sensors of upper ocean phytoplankton distributions, flow cytometry, molecular biological probes, sophisticated moored and shipboard instrumentation, and vastly increased numerical modeling capabilities. This volume is the result of the 37th Brookhaven Symposium in Biology, in which a wide spectrum of oceanographers, chemists, biologists, and modelers discussed the progress in understanding the role of primary producers in biogeochemical cycles. The symposium is dedicated to Dr. Richard W. Eppley, an intellectual giant in biological oceanography, who inspired a generation of scientists to delve into problems of understanding biogeochemical cycles in the sea. We gratefully acknowledge support from the U.S. Department of Energy, the National Aeronautics and Space Administration, the National Science Foundation, the National Oceanic and Atmospheric Administration, the Electric Power Research Institute, and the Environmental Protection Agency. Special thanks to Claire Lamberti for her help in producing this volume. Symposium Committee Paul Falkowski, Chairman Robert Bidigare Sally Chisholm Dale Kiefer Sharon Smith v CONTENTS HONORARY LECTURE Towards Understanding the Roles of Phytoplankton in Biogeochemical Cycles: Personal Notes . . . . . . . . . . . . . . . . . . . . . . . . . . . . I Richard W. Eppley FACTORS LIMITING PRIMARY PRODUCTIVITY IN THE SEA I. LIGHT The Nature and Measurement of the Light Environment in the Ocean. . . . . 9 John T. O. Kirk The Functional and Optical Absorption Cross-Sections of Phytoplankton Photosynthesis. . . . . . . . . . . . . . . . . . . . . . . . . 31 Zvy Dubinsky Molecular Ecology of Phytoplankton Photosynthesis . . . . . . . . . . . . . . . 47 Paul G. Falkowski FACTORS LIMITING PRIMARY PRODUCTIVITY IN THE SEA II. NUTRIENTS Nutrient Limitation and Marine Photosynthesis . . . . . . . . . . . . . . . . . . 69 John Cullen, Xiaolong Yang, and Hugh L. MacIntyre Geological and Climatic Time Scales of Nutrient Variability . . . . . . . . . . 89 Richard T. Barber Nutrient Limitation of New Production in the Sea. . . . . . . . . . . . . . . . . 107 Richard Dugdale and Frances Wilkerson Iron as a Limiting Factor in Oceanic Productivity. . . . . . . . . . . . . . . . . 123 John H. Martin vii ESTIMATION OF GLOBAL OCEAN PRODUCTION Satellite Ocean Color Observations of Global Biogeochemical Cycles. . . . . 139 Marlon R. Lewis Advances in Understanding Phytoplankton Fluorescence and Photosynthesis . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 155 Dale A. Kiefer and Rick A. Reynolds Bio-Optical Models and the Problems of Scaling. . . . . . . . . . . . . . . . . . 175 Robert R. Bidigare, Barbara B. Prezelin, and Raymond C. Smith TIIE ROLE OF MARINE ORGANISMS IN PRIMARY PRODUCTION Phytoplankton Size. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 213 Sallie W. Chisholm Productivity of Seaweeds. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 239 J. Ramus Productivity of Zooxanthellae and Biogeochemical Cycles. . . . . . . . . . . . 257 Leonard Muscatine and Virginia Weis NEW PRODUCTION AND BIOGEOCHEMICAL CYCLES The Importance and Measurement of New Production. . . . . . . . . . . . . . 273 Trevor Platt, Pratima Jauhari, and Shubha Sathyendranath The Role of Coastal High Latitude Ecosystems in Global Export Production. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 285 Paul K. Bienfang and David A. Ziemann Tracer-Based Inferences of New Primary Production in the Sea . . . . . . . . 299 W.J. Jenkins and D.W.R. Wallace New Production and the Global Carbon Cycle. . . . . . . . . . . . . . . . . . . 317 Jorge L. Sarmiento and Ulrich Siegenthaler LOSS PROCESSES AND MATERIAL RECYCLING Respiration: Taxation Without Representation? . . . . . . . . . . . . . . . . . . 333 Richard J. Geider Bacterioplankton Roles in Cycling of Organic Matter: The Microbial Food Web. . . . . . . . . . . . . . . . . . . . . . . . . . . 361 Jed Fuhrman viii Regeneration of Nutrients. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 385 William G. Harrison Grazing, Temporal Changes of Phytoplankton Concentrations, and the Microbial Loop in the Open Sea . . . . . . . . . . . . . . . . . . 409 Karl Banse PHYTOPLANKTON IN TIIE GLOBAL CONTENT Biosphere, Atmosphere, Ocean Interactions: A Plant Physiologist's Perspective. . . . . . . . . . . . . . . . . . . . . . . . . . . 441 Joseph A. Berry Reading the Sedimentary Record of the Ocean's Productivity. . . . . . . . . . 455 W.H. Berger and LC. Herguera Do Marine Phytoplankton Influence Global Climate? . . . . . . . . . . . . . . 487 P.M. Holligan Abstracts. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 505 Participants. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 535 Index. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 545 ix TOWARD UNDERSTANDING THE ROLES OF PHYTOPLANKTON IN BIOGEOCHEMICAL CYCLES: PERSONAL NOTES Richard W. Eppley 1969 Loring Street San Diego, CA 92109 INTRODUCTION This is a collection of remembrances of those who whetted my interest in biogeochemical cycles in my formative years of the 1960s and 1970s. I used to ask myself "How can anyone justify earning a living by studying phytoplankton?" Colleagues kept pointing out that phytoplankton production for fish food was not a suitable justification. The links between phytoplankton production and fish harvest, at least for local fisheries, were not obvious. In search of more compelling reasons I began to lean on the role of phytoplankton in C and N cycling as justification and to learn, especially from geochemists and micropaleontologists, of the great importance of phytoplankton for all of us for all time. The people and events described are more or less in chronological order rather than by subject matter. This order will lead to some awkwardness for the reader as will the personal nature of this account. This is not intended to be a scientific report but rather portions of a personal history. The pathway described starts in the fall of 1963 with my arrival at the Scripps Institution of Oceanography (Scripps) and ends with the global estimate of new production that Bruce Peterson and I reported in 1979 (Eppley and Peterson, 1979). EARLY DAYS IN THE FOOD CHAIN RESEARCH GROUP Oceanography grew quickly in the early 1960s, resulting in the importation of many people from elsewhere into the field; for example, I had studied seaweed physiology with L. R. Blinks at Stanford's Hopkins Marine Station. The rapid growth of research funds stopped in 1968 when Congress passed the Mansfield Amendment, an act that restricted the funding of academic oceanography by the so-called "mission agencies" of the U. S. government. Meanwhile, in 1962, Luigi Provasoli invited me to one of the AIBS workshops on marine biology when the Soviet invitee was unable to attend. The workshop included the leading phytoplankton researchers of that time: E. Steemann Nielsen, T. Braarud, G. E. Hutchinson, G. A. Riley, G. E. Fogg, M. R. Droop, R. A. Vollenweider, 1. H. Ryther, and 10hn Strickland. As the junior researcher in the group, I listened a