PRIMA-1met Induces Apoptosis in Waldenström's MacroglobulinemiaIndependent of p53, alone and in Combination with Bortezomib By: Mona Sobhani A thesis submitted in conformity with the requirements for the degree of Masters of Science Department of Laboratory Medicine and Pathobiology University of Toronto © Copyright by Mona Sobhani 2015 PRIMA-1met Induces Apoptosis in Waldenström's Macroglobulinemia Independent of p53, alone and in Combination with Bortezomib Mona Sobhani Master of Science Department of Laboratory Medicine and Pathobiology University of Toronto 2015 Abstract: PRIMA-1met has shown promising preclinical activity in various cancer types. However, its effect on Waldenström’s Macroglobulinemia (WM) as well as its exact mechanism of action is still elusive. In this study, we evaluated theanti-tumor activity of PRIMA-1met alone and in combination with dexamethasone or bortezomib in WM cell line and primarysamples. Treatment of WM cells with PRIMA-1met resulted in induction of apoptosis, inhibition of migration and colony formation. Upon PRIMA-1met treatment, p73 was upregulated and Bcl-xL was downregulated while no significant change in expression of p53 was observed. siRNA knockdown of p53 in WM cell line did not influence the PRIMA-1met-induced apoptotic response whereas silencingofp73 inhibited latter response in WM cells. Combined treatment with PRIMA-1met and dexamethasone or bortezomib induced synergistic reduction in cell survival in WM cells. Our study provides the rationale for PRIMA-1met’s clinical evaluation in patients with WM. ii Acknowledgements I would like to extend my sincerest thanks and regards to all those who supported and encouraged me during my Master’s study. First, I would like to express my special gratitude to my supervisors Dr. Hong Chang whose expert guidance, support, patience and encouragement made my Master’s studies a productive experience. I am grateful to have had the opportunity to train in a diverse learning environment with admirable individuals, particularly Manujhandra Saha, Yijun Yang and Yan Chen, whose proficiency and expertise in the lab have been immeasurably helpful to me. I would also like to express my special thanks to my committee members Dr. Donald Branch and Dr Chen Wang for their valuable and constructive comments. My deep gratitude is expressed to my mother and father whose love, inspiration and endless encouragement made my years ofstudies an enjoyable and unforgettable experience. They deserve special and heartfelt thanks. iii Table of Contents Abstract…………………………………………………………………………………………….i Acknowledgments...........................................................................................................................ii List of Tables ..................................................................................................................................v List of Figures ................................................................................................................................vi List of Abbreviations ................................................................................................................... vii Chapter 1:Introduction ...............................................................................................................1 1.1. Waldenström's Macroglobulinemia..........................................................................................1 1.1.1Waldenström's Macroglobulinemia.................................................................................1 1.1.2. Incidences, Demographics, and Etiology........................................................................2 1.1.3.Diagnosis……...…………………...................................................................................3 1.1.4. Clinical Features………………………………………………………………...……...4 1.1.5. Laboratory and Pathological Findings……………………………………..…………...7 1.1.6. Molecular Pathology.......…………….............................................................................9 1.1.6.1. Genetics…………..…………………………………………………………....9 1.1.6.2. Epigenetics……………………...…………………………………………….13 1.1.6.3. Microenvironment…...………………………………………………………..14 1.1.7.WM Current Treatments………………….…………….……………………………...15 1.2. PRIMA-1met……………………………………………………………………………....21 1.2.1. P53 and Apoptosis……………………………………………………………………...21 1.2.2. PRIMA-1met………...………………………………………………………………...25 1.3. Rationale, Hypothesis, and Experimental Aims…………………………………………….30 iv Chapter 2: PRIMA-1metInduces Apoptosis inWaldenström’s Macroglobulinemia Independent of p53:.……………………………………………………………………………32 2.2. Introduction ...........................................................................................................................32 2.3. Results …................................................................................................................................34 2.4. Discussion… ..........................................................................................................................42 2.5. Materials and Method……………………………………………………………………….44 2.6. References…………………………………………………………………………………...46 Chapter3: Discussion……………….………………………………………………………….50 Chapter 4:Conclusions and Future Directions………………………………………………56 References .....................................................................................................................................61 v List of Table Table 1: p53-activating small molecule drugs utilized in hematological malignancies………………………24 vi List of Figures Figure1: B cell maturation in WM……………………………………………………………...5 Figure2: Clinical features of WM……………………………………………………………….7 Figure3:MYD88L265 activation of NF-κB pathway…………………………………………11 Figure4:Mechanismof p53 driven intrinsic apoptoticpathway…………………………….22 Figure5: PRIMA-1met structure and mode of action……………………………………...28 Figure 6: Proposed mechanism linking PRIMA-1metinduced P73 and ROS production..60 Paper Figures: Figure1:The effect of PRIMA-1meton viability of WM cell lines and patient samples..…36 Figure 2:Theapoptoticeffect of PRIMA-1met in WM cell line.............................................37 Figure3:The effect of PRIMA-1meton apoptotic signaling in BCWM-1 cells………………….37 Figure 4: Anti-tumoractivities of PRIMA-1metin WM cells…………………………………………..38 Figure5:Effects of PRIMA-1metin combination with current WM therapeutics……………39 Figure 6: PRIMA-1met cytotoxicity is P53-independent……………………………………………………40 Figure7: PRIMA-1met effect on BCWM-1 survival is P73-dependent…….………………………..41 vii List of Abbreviations AML Acute Myeloid Leukemia aCGH Array-based Genomic Hybridization Apaf-1 Apoptotic protease activating factor 1 ASCT Autologous Stem Cell Transplants AS-PCR Allele Specific Polymerase Chain Reaction Bax Bcl-2 associated x protein Bcl-xL B-cell lymphoma-extra Large Bcl-2 B-cell lymphoma 2 BMNC Blood Mononuclear Cell BMSC Bone Marrow Stromal Cells BTK Bruton's Tyrosine Kinase CAD Caspase-Activated DNase CAN Chromosomal Numerical Abnormalities CXCR4 C-X-C Receptor type 4 CR Complete Remission GLS2 Glutaminase G6PD Glucose-6-Phosphate Dehydrogenase HSP70 Heat Shock Protein 70 IAP Inhibitors of Apoptosis Protein Ig Immunoglobulin International Prognostic Staging System for Waldenstrom’s IPSSWM Macroglobulinemia IRAK Interleukin-1 Receptor-Associated Kinase MDM2 Mouse Double Minute 2 MGUS Monoclonal Gammopathy of Undetermined Significance MM Multiple Myeloma MPT Mitochondrial Permeability Transition MQ Methylene quinuclidinone viii MR Minor remission MYD88 Myeloid Differentiation Primaryresponse gene 88 NADPH Nicotinamide Adenine Dinucleotide Phosphate ORR Overall Response Rate PBMNC Peripheral Blood Mononuclear Cell PRIMA-1 P53-dependent reactivation and induction of massive apoptosis PRDM1 PR Domain Zinc Finger Protein 1 Puma P53 upregulated modulator of apoptosis REAL Revised European-American Lymphoma ROS Reactive Oxygen Species SDF-1 Stromal Cell-Derived Factor-1 SCID Sever Combine Immunodeficient Smac/DIABLO Second Mitochondria-derived Activator of Caspases/ Direct IAP- Binding protein with Low PI TNF Tumor Necrosis Factor TNFAIP3 Tumor Necrosis Factor Alpha-Induced Protein 3 VGPR Very Good Partial Remissions WM Waldenström's Macroglobulinemia WHO World Health Organization XBP1 X-box Binding Protein 1 ix Chapter 1 Introduction 1.1. Waldenström's Macroglobulinemia 1.1.1. What is Waldenström's Macroglobulinemia? Waldenström's Macroglobulinemia (WM) is a chronic B-cell lymphoproliferative malignancy (Gertz,2012).It was first described by Dr. Jan Gösta Waldenström, a Swedish internist, in two patients who presented oronasal bleeding, anemia, lymphadenopathy, hypergammaglobulinemia, an elevated sedimentation rate, hyperviscosity, normal bone survey, cytopenias, and a predominantly lymphoid involvement of the bone marrow (Shaheen et al. , 2012). Today, the World Health Organization (WHO) defines WM as a lymphoplasmacytic lymphoma characterized by plasmacytic infiltration of bone marrow and immunoglobulin M (IgM) monoclonal gammopathy (Shaheen et al., 2012). Malignant cells in WM are quite various cytologically ranging from small lymphocyte to plasmacytoid lymphocytes and plasma cells (Naderi and Yang, 2013). These cells originate late in B cell development after somatic hypermutation but before final differentiation to plasma cells (Jenz, 2013). Common symptoms of WM includes: fatigue due to anemia, thrombocytopenia, hyperviscosity symptoms and in more severe cases of the disease; organomegaly, neuropathy and symptoms associated with Ig deposition (Treon, 2013). Historically, any type of lymphoma with high levels of Igs was associated with WM; therefore, it was popular to consider WM as a clinical syndrome that is associated with various lymphoma types instead of a separate disease (Shaheen et al., 2012). Until a few years ago, differential diagnosis of WM was quite difficult for hematopathologists both due to inefficient definitions of the disease and lack of proper diagnostic tools. In 1994, the Revised European-American Lymphoma (REAL) classification defined Lymphoplasmacytic Lymphoma (LPL) as “a 1
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