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Dipyaman Ganguly Plasmacytoid Dendritic Cells Plasmacytoid Dendritic Cells Dipyaman Ganguly Plasmacytoid Dendritic Cells DipyamanGanguly IICB-TranslationalResearchUnitofExcellence CSIR-IndianInstituteofChemicalBiology Kolkata,WestBengal,India ISBN978-981-19-5594-5 ISBN978-981-19-5595-2 (eBook) https://doi.org/10.1007/978-981-19-5595-2 ©TheEditor(s)(ifapplicable)andTheAuthor(s),underexclusivelicensetoSpringerNatureSingapore PteLtd.2022 Thisworkissubjecttocopyright.AllrightsaresolelyandexclusivelylicensedbythePublisher,whether thewholeorpartofthematerialisconcerned,specificallytherightsoftranslation,reprinting,reuseof illustrations, recitation, broadcasting, reproduction on microfilms or in any other physical way, and transmission or information storage and retrieval, electronic adaptation, computer software, or by similarordissimilarmethodologynowknownorhereafterdeveloped. Theuseofgeneraldescriptivenames,registerednames,trademarks,servicemarks,etc.inthispublication doesnotimply,evenintheabsenceofaspecificstatement,thatsuchnamesareexemptfromtherelevant protectivelawsandregulationsandthereforefreeforgeneraluse. The publisher, the authors, and the editorsare safeto assume that the adviceand informationin this bookarebelievedtobetrueandaccurateatthedateofpublication.Neitherthepublishernortheauthorsor theeditorsgiveawarranty,expressedorimplied,withrespecttothematerialcontainedhereinorforany errorsoromissionsthatmayhavebeenmade.Thepublisherremainsneutralwithregardtojurisdictional claimsinpublishedmapsandinstitutionalaffiliations. ThisSpringerimprintispublishedbytheregisteredcompanySpringerNatureSingaporePteLtd. The registered company address is: 152 Beach Road, #21-01/04 Gateway East, Singapore 189721, Singapore Preface It has been more than 20 years that the plasmacytoid dendritic cells or pDCs were established as a uniquely specialized immune cell and proposed to be a subset of dendritic cells. Dendritic cells are the crucial interlocutors between the innate and adaptive immune system. Accordingly, research over the past almost two decades has revealed the functional dimensions of pDC as an innate-adaptive interlocutor, quite like the conventional dendritic cells (cDCs), but distinct in its functional scopes.Thereisanecessityforbringingtherichcorpusofknowledgeinthedomain ina singlevolume,especially forprovidingaconsensus update fora newcomer in thefield,aneedthatwasfeltbythepresentauthortoowhilebeingayounggraduate studenthimself.Thepresentworkaimstofillthatgapinggap,beingperhapsthefirst volumefocusedsolelyonscientificunderstandingabouttheplasmacytoiddendritic cells and their role in orchestrating the immune response in different patho- physiologiccontexts. ResearchidentifyingpDCsastheprofessionaltypeIinterferonproducersinthe body, with plausible affiliation to the dendritic cell lineage, interestingly went in parallelwiththeresearcheffortsthatledtothediscoveryofcDCs.RalphSteinman discoveredthecDCsinthelate1970sandestablishedthefunctionalphenotypesof these cells over the following one decade along with other groups working in different parts of the world. Possibility of a professional type I IFN producer, in response to infectious agents, also cropped up from experimental data in the late 1970s.Theconcertedeffortbydifferentgroupsinlaboratoriesallaroundtheworld, whichfinallyculminatedinidentifyingpDCsasadistinctdendriticcellsubset,was phenomenalintermsofexperimentalconcurrences,incrementalinsights,andcross- validations, and it took almost 20 years. The volume begins with the fascinating story of these discoveries, citing the important experiments that provided the indi- vidualpiecesofthepuzzle.Thisisfollowedbyabriefdescriptionofthemeticulous developmental studies that traced the hematopoietic development of the two DC subsets,confirminganontologicbasisforthesharedlineageaffiliationbycDCsand pDCs as well as revealing an intricate transcriptional regulation for the individual cellularidentities. v vi Preface The major functional identity of pDCs, despite their ontogenic affiliation to the DC lineage of professional antigen presenting cells, is the rapid and massive induction of type I IFNs in response to activation of endosomal toll-like receptors (TLRs) by pathogen-derived ligands. First, in a dedicated chapter, we will learn about thespecializedmechanisms involvedinandpDC-intrinsicmolecularregula- tors of TLR activation. Then we will follow it up with a discussion on the role of pDCs,andtypeIIFNsreleasedbythem,indifferentcontextsofinfections,aswellas inautoreactiveinflammation,aspDCshavebeenidentifiedoverthepastdecadeor soasacrucialplayerinthepathogenesisofanumberofautoimmunediseasesaswell aschronicinflammationassociatedwithmetabolicdisorders. Next, a rather anti-inflammatory role, that pDCs are also widely documented to play in varied clinical contexts, viz. allergic immune responses, graft versus host diseases,andcancer,willbediscussed.RoleofpDCsindrivingimmunetoleranceis identifiedtobedetrimentalinsuchclinicalcontexts.Finally,wewillconsiderhow these diversified roles of pDCs in different contexts of immune response and inflammation necessitate therapeutic targeting of pDCs also to suit the particular contexts as we take stock of varied strategies adopted for targeting pDCs in such discreetclinicalcontexts.PDCshavebeenoneoftheveryfewimmunecellsubsets that areboth critically involved inthepathogenesisof various human diseasesand amenable for therapeutic targeting with already proven efficacies in specific contexts. I hope the present monograph will serve its intended purpose of providing the studentsandprofessionalsinterestedinthisdomainwiththenecessarybasicunder- standingonthisveryinterestingmemberofourimmunesystem.Alargenumberof researchgroupshaveputeffortsinthisdomainoverthepastfourdecadesproviding withindispensableinsightsondifferentaspectsofthisveryimportantimmunecell. Theobviousrestrictionsofspaceinthisvolumemighthavecausedanumberofsuch effortsbeingomittedfromthelistsofcitations.Theauthorseekssincere apologies forsuchomissions. Idedicatethisvolumetoallmyresearchmentors,scientificcollaboratorsaswell asmymentees,fromallofwhomIhadtheopportunitytolearnaboutthisextremely interesting immune cell, during my research and academic career in cellular and translationalimmunology. Kolkata,WestBengal,India DipyamanGanguly Contents 1 DiscoveryofaNewDendriticCellSubset. . . . . . . . . . . . . . . . . . . . . 1 1.1 ABriefBiosketchoftheImmuneSystem. . . . . . . . . . . . . . . . . . 1 1.2 DiscoveryoftheConventionalDendriticCells. . . . . . . . . . . . . . 2 1.3 TheSearchforaProfessionalInterferonProducer. . . . . . . . . . . . 4 1.4 ANewDendriticCellSubsetIsthe“ProfessionalInterferon Producer”. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 5 1.5 Conclusion. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 6 References. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 7 2 OriginandTranscriptionalIdentityofPlasmacytoidDendritic Cells. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11 2.1 FLT3-ReceptorDependenceandSharedOriginofcDCs andpDCs. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11 2.2 MyeloidVersusLymphoidOriginofpDCs. . . . . . . . . . . . . . . . 12 2.3 TranscriptionalProgramforpDCCommitmentandFunction. . . . 14 2.3.1 E2-2. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 15 2.3.2 IRF8. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 16 2.3.3 RegulatorsofFunctionalIdentity. . . . . . . . . . . . . . . . . . 17 2.4 LocalizationandMigrationofpDCs. . . . . . . . . . . . . . . . . . . . . 18 2.5 Conclusions. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 19 References. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 19 3 ActivationandFunctionsofPlasmacytoidDendriticCells. . . . . . .. . 25 3.1 Toll-likeReceptorActivationandSignalinginpDCs. . . . . . . . . 25 3.2 CellBiologyofEndosomalTLRLocalizationinpDCs. . . . . . . . 27 3.3 TheCytokineResponseinpDCsinResponsetoTLR Activation. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 28 3.4 AntigenPresentationbypDCs. . . . . . . . . . . . . . . . . . . . . . . . . . 32 3.5 CellBiologyofDifferentialpDCResponsetoTLRActivation. . 33 3.6 CellularMetabolismofActivatedpDCs. . . . . . . . . . . . . . . . . . . 36 3.7 TheElusiveRoleofIL-3inpDCImmunobiology. . . . . . . . . . . . 38 vii viii Contents 3.8 FunctionalHeterogeneityofPlasmacytoidDendriticCells. . . . . . 39 3.9 RegulatorsofTypeIIFNInductionbypDCs. . . . . . . . . . . . . . . 40 3.9.1 ILT7. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 41 3.9.2 BDCA2.. . . . . . .. . . . . . .. . . . . . .. . . . . .. . . . . . .. . 41 3.9.3 Siglec-H. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 42 3.10 OtherRegulatorySurfaceMoleculesinpDCs. . . . . . . . . . . . . . . 43 3.11 EndocannabinoidsandCannabinoidReceptors. . . . . . . . . . . . . . 45 3.12 MetaboliteTransportersandReceptors. . . . . . . . . . . . . . . . . . . . 46 3.13 EffectofBiologicalSexonpDCActivation. . . . . . . . . . . . . . . . 46 3.14 Conclusions. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 47 References. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 48 4 PlasmacytoidDendriticCellsandInfections. . . . . . . . . . . . . . . . . . . 61 4.1 RNAVirusesandpDCs. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 61 4.2 HumanImmunodeficiencyVirusandpDCs. . . . . . . . . . . . . . . . 63 4.3 PDCsandtheNovelCoronavirusSARS-CoV-2. . . . . . . . . . . . . 66 4.4 DNAVirusesandpDCs. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 66 4.5 PDCsinBacterialInfections. . . . . . . . . . . . . . . . . . . . . . . . . . . 68 4.5.1 ExtracellularBacteriaandpDCs. . . . . . . . . . . . . . . . . . . 69 4.5.2 IntracellularBacteriaandpDCs. . . . .. . . . .. . . .. . . . .. 70 4.6 PDCsinMalaria. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 72 4.7 PDCsinFungalInfections. . . . . . . . . . . . . . . . . . . . . . . . . . . . . 74 4.8 Conclusions. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 75 References. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 75 5 PlasmacytoidDendriticCellsinAutoimmunity. . . . . . . . . . . . . . . . . 85 5.1 SystemicLupusErythematosus. . . . . . . . . . . . . . . . . . . . . . . . . 86 5.2 Psoriasis. . . . . .. . . . . . . . . . .. . . . . . . . . . .. . . . . . . . . . . .. . 88 5.3 SystemicSclerosis. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 92 5.4 Sjogren’sSyndrome. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 94 5.5 RoleofpDCsinOtherMajorRheumatologicalDisorders. . . . . . 94 5.6 Conclusions. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 97 References. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 97 6 PlasmacytoidDendriticCellsandMetabolicDisorders. . . . . . . . . . . 107 6.1 Type1DiabetesMellitus.. . . . .. . . . . .. . . . . .. . . . .. . . . . .. 108 6.2 ObesityandType2Diabetes. . . . . . . . . . . . . . . . . . . . . . . . . . . 108 6.3 CardiovascularComponentsofMetabolicSyndrome. . . . . . . . . . 111 6.4 FattyLiverDiseaseandHepaticMetaflammation. . . . . . . . . . . . 112 6.5 APotentialPathogenicContinuumforAutoimmuneDiseases andMetabolicSyndrome. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 113 6.6 Conclusions. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 115 References. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 115 Contents ix 7 TolerogenicFunctionsofPlasmacytoidDendriticCells. . . . . . . . . . . 121 7.1 ThymicpDCsandCentralTolerance. . . . . . . . . . . . . . . . . . . . . 122 7.2 MucosalToleranceDrivenbypDCs. . . . . . . . . . . . . . . . . . . . . . 123 7.3 TolerogenicpDCsandTissueTransplantation. . . . . . . . . . . . . . 125 7.4 SuppressionofAnti-cancerImmunity. .. . . . . .. . . . . .. . . . . .. 127 7.5 Conclusions. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 127 References. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 128 8 PlasmacytoidDendriticCellsandCancer. . . . . . . . . . . . . . . . . . . . . 133 8.1 PlasmacytoidDendriticCellsandthe“Cancer-immunity Cycle”. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 133 8.2 LeukemogenesisandpDCs. . . . . . . . . . . . . . . . . . . . . . . . . . . . 134 8.3 BreastCancerandpDCs. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 135 8.4 OvarianCarcinomaandpDCs. . . . . . . . . . . . . . . . . . . . . . . . . . 137 8.5 PDCsinNeoplasmasoftheAero-digestiveTract. . . . . . . . . . . . 137 8.6 MalignantMelanomaandpDCs. . . . . . . . . . . . . . . . . . . . . .. . . 139 8.7 Conclusion. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 140 References. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 141 9 TherapeuticTargetingofPlasmacytoidDendriticCells. . . . . . . . .. . 147 9.1 TargetingpDCsandTypeIIFNsinAutoreactive Inflammation. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 147 9.1.1 TargetingEndosomalTLRsinpDCs. . . . . . . . . . . . . . . . 147 9.1.2 BiologicsTargetingpDCsandTypeIIFNs. . . . . . . . . . . 151 9.2 TargetingpDCsinInfection. . . . . . . . . . . . . . . . . . . . . . . . . . . 151 9.3 TargetingpDCsinCancer. . . . . . . . . . . . . . . . . . . . . . . . . . . . . 152 9.3.1 TargetingEndosomalTLRsandOtherpDC-intrinsic Molecules. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 152 9.3.2 PDC-BasedVaccinesforCancer. . . . . . . . . . . . . . . . . . . 154 9.4 Conclusion. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 154 References. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 155 Abbreviations. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 161 Chapter 1 Discovery of a New Dendritic Cell Subset 1.1 A Brief Biosketch of the Immune System The immune system in the body of the higher animals, if not in all multicellular organisms,providesforaspecializeddivisionoflabor,toacellortogroupsofcells that,(a)performsentinelfunctiontolookforpotentialpathogensinvadingthebody (in the context of infections) or transformed self-origin cells (in the context of cancers),and(b)trytoneutralizetheplausible“danger”posedbysuchoccurrences to the anatomic and physiological integrity of the body. Phylogeny has diversified the cellular participants in this critical bodily function to two distinctive axes of innateimmunityandadaptiveimmunityinhigheranimals. The innate immune cells (e.g., neutrophils, macrophages, natural killer or NK cells)performthesentinelfunctionaswellastakeupreflexivemitigatingmissions throughreleaseof biochemical mediators orotherwise. The adaptive immune cells (viz. T and B lymphocytes) expressing editable antigen receptors on their cell surface, educate themselves with the molecular identity of the “danger,” be it pathogens or transformed self-origin cells, and prepare for more efficient assault on future encounters, by either working on their antigen receptors (e.g., the B cell receptor or BCR) or selecting and expanding cellular clones expressing the most relevantandefficientantigenreceptors(e.g.,incaseofTcellsexpressingspecificT cellreceptorsorTCRs)orboth. The decision taken by innate immune cells toget activated and initiate immune response depends on a range of cell surface and cytosolic receptors expressed by them, named the pattern recognition receptors or PRRs (viz. Toll-like receptors or TLRs, RIG-I like receptors or RLRs, NOD-like receptors or NLRs, C-type lectin receptors or CLRs). These receptors are neither selectable nor editable, unlike the TCRs orBCRs,respectively,recognizemolecular patterns thatareofeitherpatho- genic origin (the pathogen associated molecular patterns or PAMPs, e.g. bacterial lipopolysaccharides,lipoproteins,flagellin,viralnucleicacids,etc.)orareknownto signalvariousintracorporeal“danger”(the danger associated molecularpatterns or ©TheAuthor(s),underexclusivelicensetoSpringerNatureSingaporePteLtd.2022 1 D.Ganguly,PlasmacytoidDendriticCells, https://doi.org/10.1007/978-981-19-5595-2_1

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