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PLANT RECEPTOR-LIKE KINASES This pageintentionallyleftblank PLANT RECEPTOR-LIKE KINASES Role in Development and Stress Edited by S K U ANTOSH UMAR PADHYAY DepartmentofBotany,PanjabUniversity,Chandigarh,Punjab,India S HUMAYLA DepartmentofBotany,PanjabUniversity,Chandigarh,Punjab,India AcademicPressisanimprintofElsevier 125LondonWall,LondonEC2Y5AS,UnitedKingdom 525BStreet,Suite1650,SanDiego,CA92101,UnitedStates 50HampshireStreet,5thFloor,Cambridge,MA02139,UnitedStates TheBoulevard,LangfordLane,Kidlington,OxfordOX51GB,UnitedKingdom Copyright©2023ElsevierInc.Allrightsreserved. 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ISBN:978-0-323-90594-7 ForInformationonallAcademicPresspublications visitourwebsiteathttps://www.elsevier.com/books-and-journals Publisher:NikkiP.Levy AcquisitionsEditor:NancyJ.Maragioglio EditorialProjectManager:LenaSparks ProductionProjectManager:MariaBernard CoverDesigner:VickyPearsonEsser TypesetbyMPSLimited,Chennai,India Contents List of contributors xi 1.6 Cellsignalingnetworkviareceptor-like About the editors xiii kinases 15 1.7 Conclusions 15 Preface xv Acknowledgments 16 Acknowledgments xvii References 16 1 An overview of receptor-like kinases in 2 Evolutionary history of plant plants 1 receptor-like kinases 25 ShumaylaandSantoshKumarUpadhyay DeepikaAntil,ShumaylaandSantoshKumarUpadhyay 1.1 Introduction 1 2.1 Introduction 25 1.2 Classificationofreceptor-likekinases 2 2.2 Plantreceptor-likekinasesorigin 27 1.2.1 Lectindomain-containingreceptor-like 2.3 Receptor-likekinasesinplantkingdom 28 kinases 2 2.3.1 Algae(charophyteand 1.2.2 Leucine-richrepeatdomain-containing chlorophyte) 28 receptor-likekinases 3 2.3.2 Bryophytes 30 1.2.3 Wall-associatedkinasedomain- 2.3.3 Angiosperms 30 containingreceptor-likekinases 4 2.4 Conclusions 33 1.2.4 Cysteine-richrepeatdomain-containing Acknowledgments 33 receptor-likekinases 4 References 33 1.2.5 Proline-rich/extensindomain- containingreceptor-likekinases 4 3 Receptor-like kinases and their role in 1.2.6 Lysinmotifdomain-containing receptor-likekinases 5 plant innate immunity 39 1.2.7 Chitinase-typedomain-containing FengKongandKatrinaM.Ramonell receptor-likekinases 5 1.2.8 Thaumatindomain-containing 3.1 Introduction 39 receptor-likekinases 5 3.2 Receptor-likekinasesinpathogen-triggered 1.2.9 Otherreceptor-likekinases 5 immunity 40 1.2.10 Receptor-likecytoplasmickinases 5 3.3 Receptor-likekinasesinplant(cid:1)microbe 1.3 Receptor-likekinasemediatesplantgrowthand interactions 43 development 6 3.3.1 Lectinfamilyreceptor-likekinases 45 1.4 Defensiveroleofreceptor-likekinasesagainst 3.3.2 Cysteine-richreceptor-likekinases 46 pathogenattack 8 3.3.3 Receptor-likekinasesandpeptide 1.5 Receptor-likekinasesandabioticstress recognition 46 management 11 3.3.4 Receptor-likekinasesandperceptionof 1.5.1 Droughtstress 11 lipopolysaccharides 47 1.5.2 Saltstress 12 3.3.5 Receptor-likekinasesanddamage- 1.5.3 Coldstress 13 associatedmolecularpatterns 1.5.4 Metal/metalloids 14 perception 47 v vi Contents 3.4 Receptor-likekinasesinplant(cid:1)fungal 5.1.2 Saltstress 97 interactions 48 5.1.3 Changingtemperaturestress 104 3.4.1 Lysinmotifreceptor-likekinasesactin 5.1.4 Oxidativestress 108 thedetectionoffungalintruders 48 5.2 Conclusion 109 3.4.2 Receptor-likekinasesinplant References 110 developmentjointhefightagainst pathogens 49 6 Role of somatic embryogenesis 3.4.3 Lectinreceptor-likekinasesandfungal receptor-like kinase family in defense 49 plants 121 3.5 Receptor-likekinasesinplant(cid:1)virus interactions 50 Madhu,AmandeepKaur,AlokSharmaand SantoshKumarUpadhyay 3.5.1 NIKsandviraldetection 50 3.5.2 BIR1crossesovertocatchviruses 51 6.1 Introduction 121 3.6 Conclusionandoutlook 51 6.2 DiverserolesofSomaticembryogenesis References 52 receptor-likekinasesinplantgrowth, development,anddefensepathways 123 4 The role of receptor-like kinases in 6.2.1 Theroleofsomaticembryogenesis fungal/microbial resistance in plants 63 receptor-likekinasesinplant embryogenesis 123 GeletaDugassaBarka,IsabelSamilaLimaCastro, Danu´biaRodriguesAlves,DeˆniaPiresdeAlmeidaand 6.2.2 Somaticembryogenesisreceptor-like EvelineTeixeiraCaixeta kinasesinthebrassinosteroidsignaling pathway 125 4.1 Introduction 63 6.2.3 Somaticembryogenesisreceptor-like 4.2 Plant-pathogeninteraction 64 kinasesregulateanther 4.3 Theroleofreceptor-likekinaseproteinsin development 126 plant-pathogeninteraction 69 6.2.4 Somaticembryogenesisreceptor-like 4.3.1 Diversityofreceptor-likekinasesand kinasesinstomataldevelopmentand theircognateligands 69 patterning 127 4.3.2 Receptor-likekinasesarethefrontline 6.2.5 Somaticembryogenesisreceptor-like patternrecognitionreceptorsin kinasesinplantvascular pathogen-triggeredimmunity—pattern- differentiation 128 triggeredimmunity 72 6.2.6 Somaticembryogenesisreceptor-like 4.3.3 Receptor-likekinasesplaydecisiveroles kinasesincontrollingrootmeristem fortheinductionofresistancein development 129 effector-triggeredimmunity 74 6.2.7 Somaticembryogenesisreceptor-like 4.4 Resistancebreedinginlightoftheadvancesin kinasesinfloralorgan structuralandfunctionalcharacterizationof abscission 129 receptor-likekinases 75 6.2.8 Roleofsomaticembryogenesis 4.5 Conclusions 76 receptor-likekinaseinapomixis 130 Acknowledgments 77 6.2.9 Somaticembryogenesisreceptor-like References 77 kinasesinplantimmunity responses 130 5 Roles of plant receptor-like kinases in 6.3 Somaticembryogenesisreceptor-likekinasesas response to abiotic stress 87 probablecandidatestoimprovecropsby ElifKarlik employingbiotechnologicalapproaches 131 6.4 Conclusions 132 5.1 Introduction 87 Acknowledgments 133 5.1.1 Droughtstress 88 References 133 vii Contents 7 Analysis of lectin receptor-like 8.6 Conclusions 162 kinases and their functions in higher Acknowledgments 162 References 162 plants 139 AmandeepKaur,AlokSharma,Madhuand 9 Structural and functional analysis of SantoshKumarUpadhyay lysin motif receptor-like kinases in 7.1 Introduction 139 plants 167 7.2 Lectinreceptor-likekinasesin Shumayla,ShiviTyagiandSantoshKumarUpadhyay monocotyledonousplantsandtheir functions 141 9.1 Introduction 167 7.2.1 Oryzasativa 141 9.1.1 Structureofplantlysinmotifreceptor- 7.2.2 Triticumaestivum 143 likekinases 168 7.2.3 SetariaitalicaL 144 9.1.2 Symbioticroleoflysinmotifreceptor- 7.2.4 SaccharumspontaneumL 144 likekinases 170 7.2.5 Hordeumspp 144 9.1.3 Perceptionofchitinandpeptidoglycan 7.3 Lectinreceptor-likekinasesindicotyledonous bylysinmotifreceptor-likekinases 171 plantsandtheirfunctions 145 9.1.4 PAMPandsymbiosissignalingcrosstalk 7.3.1 Arabidopsisthaliana 145 mediatedbylysinmotifreceptor-like 7.3.2 CucumissativusL 146 kinases 172 7.3.3 Medicagotruncatula 147 9.2 Conclusions 174 7.3.4 Solanumlycopersicum 147 Acknowledgments 175 7.3.5 Solanumtuberosum 147 References 175 7.3.6 Nicotianaspp 148 7.3.7 Pisumsativum 148 7.3.8 Populusspp 148 10 Thaumatin-domain containing 7.3.9 Vignaradiata 149 receptor-like kinases in plants 179 7.4 Pear 149 AlokSharma,Madhu,AmandeepKaurand 7.4.1 Gossypiumhirsutum 149 SantoshKumarUpadhyay 7.4.2 Glycinemax 149 7.5 Conclusions 149 10.1 Introduction 179 Acknowledgments 150 10.2 Discoveryofthaumatin-likeprotein References 150 kinases 182 10.3 Identificationofthaumatin-likeprotein kinasesinvariousplantspecies 182 8 Cysteine-rich receptor-like kinases and 10.4 Structuralarchitectureandsubcellular stress response in plants 155 localizationofthaumatin-likeprotein kinases 183 ShumaylaandSantoshKumarUpadhyay 10.4.1 Genestructure 184 8.1 Introduction 155 10.4.2 Proteinstructure 184 8.2 Structureofcysteine-richreceptor-like 10.4.3 Subcellularlocalization 184 kinases 157 10.5 Evolutionaryanalysesofthaumatin-like 8.3 Cysteine-richreceptor-likekinasestriggered proteinkinases 186 immunityagainstbioticstress 158 10.6 Rolesofthaumatin-likeproteinkinases 8.4 Cysteine-richreceptor-likekinasesrolein inplantdevelopmentandstress signalingpathwaysandplant resistance 187 development 161 10.7 Conclusion 189 8.5 Cysteine-richreceptor-likekinasesfunctionin Acknowledgments 190 responsetoabioticstresses 161 References 190 viii Contents 11 SNF1-related protein kinase in plants: Acknowledgments 221 roles in stress response and signaling 195 References 221 ShefaliMishra,RenuSharma,ReetiChaudhary, 13 Functional role of receptor-like kinases UpendraKumarandPradeepSharma in mediating brassinosteroid signaling 11.1 Introduction 195 pathway 229 11.2 Activationofsignalingpathwaysunderthe IraVashishtandNehaSharma stress 196 11.3 ThefunctionofSNF1-relatedproteinkinases 13.1 Introduction 229 subfamilyinplants 199 13.2 BRsignaltransductionmechanism 230 11.3.1 RoleofSNF1-relatedproteinkinase1 13.3 ExtracellularperceptionofBRs 230 intheregulationofseedmaturation 13.3.1 TheinactivestateofBRI1 232 andABAsignaling 199 13.3.2 IntracellularinductionofBR 11.3.2 SNF1-relatedproteinkinase1 signals 232 preventsfloweringandvegetative 13.3.3 Signaltransductioncascadefrom development 199 surfacereceptortonucleus 233 11.3.3 RoleofSNF1-relatedproteinkinase2 13.3.4 Targetgenesofbrassinosteroid inplantgrowthand signaling 233 development 200 13.3.5 Associationofinteractiveregulatory 11.3.4 ParticipationofSNF1-relatedprotein partnerswitheffectorBES1andBZR1 kinase2subfamilyinsignaling transcriptionfactors 234 pathway 201 13.3.6 TerminationofBRsignals 234 11.3.5 SNF1-relatedproteinkinase3inlow 13.4 Regulationofreceptorabundance 235 K1stress-responsivesignaling 13.5 Sub-cellularlocalizationandclusteringofBR pathway 202 receptors 236 11.4 Conclusion 203 13.6 Crosstalkofbrassinosteroidsandother References 203 regulatorypathways 237 13.7 Bioticandabioticstressesandplant 12 Role of leucine-rich repeat receptor- defense 237 like kinases in abiotic and biotic stress 13.7.1 Bioticstress 237 responses in plants 211 13.7.2 Abioticstress 239 13.7.3 Plantgrowthanddevelopment 240 ShiviTyagi,ShumaylaandSantoshKumarUpadhyay 13.7.4 Reproduction 241 13.8 DivergenceofcanonicalBRsignaling 12.1 Introduction 211 pathway 242 12.2 Structureofleucine-richrepeatreceptor-like 13.9 Conclusions 242 kinase 213 References 243 12.3 Leucine-richrepeatreceptor-likekinasesrole inthegrowthanddevelopmentofplant 215 14 Plant hormones mediated 12.4 Roleofleucine-richrepeatreceptor-like transcriptional regulation of receptor-like kinaseunderbioticstressconditions 215 12.5 Roleofleucine-richrepeatreceptor-like kinases 253 kinaseunderabioticstressconditions 218 FarinazJafariGhods 12.5.1 Salinitystress 219 12.5.2 Droughtstress 219 14.1 Introduction 253 12.5.3 Heatstress 220 14.2 Auxin 255 12.5.4 Coldstress 220 14.3 Brassinosteroid 255 12.5.5 Otherabioticstresses 221 14.4 Salicylicacid 256 12.6 Conclusions 221 14.5 Gibberellins 258 ix Contents 14.6 Abscisicacid 259 17 Receptor-like kinases induced by 14.7 Ethylene 260 abscisic acid in plants 305 14.8 Conclusionandperspectives 261 PriyaSharma,KalpeshYajnik,SadhanaSinghandPurvaBhalothia Acknowledgments 262 Competingfinancialinterests 262 17.1 Introduction 305 Disclosurestatement 262 17.2 Receptorproteinkinases 306 References 262 17.3 Receptor-likekinases 307 17.4 Abscisicacid 311 15 Recent advances in the role of protein 17.5 Overviewofmoleculareventsinvolvedin kinases during plant-herbivore abscisicacid(cid:1)mediatedstressresponse 312 interaction 269 17.5.1 Abscisicacid(cid:1)inducedreceptor-like kinases(cid:1)mediatedsignalinginguard SameerDixitandAkanchhaShukla cellsduringwaterstress 313 15.1 Plant-herbivoryinteraction:acomplex 17.6 Receptor-likekinasesinducedbyabscisic phenomenon 269 acid 314 15.2 Effectorsfromherbivore 270 17.7 Conclusionandfutureperspectives 319 15.3 Patternrecognitionreceptorkinasesin References 320 responsetoherbivory 271 Furtherreading 327 15.4 Mitogen-activatedproteinkinasesinresponses toherbivory 272 18 The role of mitogen-activated protein 15.5 Calcium-dependentproteinkinasesin kinases in stress signaling in plants 329 responsestoherbivory 273 NaziaRehman,MuhammadRamzanKhan,MadihaZaynab, 15.6 Conclusionandoutlook 274 YasirSharifandNelamSajjad Acknowledgments 275 References 275 18.1 Introduction 329 18.2 Intricacyandcross-talkactivitiesofmitogen- 16 Phosphorylation-dependent regulation activatedproteinkinasessignaling 330 of receptor-like kinases during root nodule 18.3 Mitogen-activatedproteinkinasesandabiotic stresses 332 symbiosis (RNS) 281 18.3.1 Mitogen-activatedproteinkinase BhagathKumarPalaka,SwathiGhantasala,RajuKuiry,Akancha cascademediatedsignaltransduction ShuklaandSwarupRoyChoudhury indroughtandsaltstresses 332 18.3.2 Drought 332 16.1 Introduction 281 18.3.3 Saltstress 333 16.2 Phosphorylationofreceptor-like 18.3.4 Temperaturestress 334 kinases 283 18.3.5 Mitogen-activatedproteinkinasesand 16.3 Importanceofphosphorylationofreceptor- bioticstress 335 likekinasesinplants 285 18.4 Conclusions 336 16.4 Importanceofphosphorylationofreceptor- References 337 likekinasesinroot-nodule-symbiosis 286 16.5 Phosphorylationofnodfactorreceptors 286 19 CLAVATA signaling pathway receptors 16.6 Interactorsofnodfactorreceptor1andnod factorreceptor5 289 modulate developmental traits and stress 16.7 PhosphorylationofSymRK 289 responses in crops 343 16.8 InteractorsofSymRK 290 UditaBasuandSwarupK.Parida 16.9 Phosphorylationofreceptor-likekinasesin autoregulationofnodulation(AON) 292 19.1 Introduction 343 16.10 Conclusions 293 19.2 Theleucine-richrepeat-receptor-likekinases References 296 involvedinCLAVATAsignaling 345