Plant Microbiome: Stress Response PDF
Preview Plant Microbiome: Stress Response
Microorganisms for Sustainability 5 Series Editor: Naveen Kumar Arora Dilfuza Egamberdieva Parvaiz Ahmad Editors Plant Microbiome: Stress Response Microorganisms for Sustainability Volume 5 Series editor Naveen Kumar Arora, Environmental Microbiology, School for Environmental Science, Babasaheb Bhimrao Ambedkar University, Lucknow, Uttar Pradesh, India More information about this series at http://www.springer.com/series/14379 Dilfuza Egamberdieva • Parvaiz Ahmad Editors Plant Microbiome: Stress Response Editors Dilfuza Egamberdieva Parvaiz Ahmad Faculty of Biology Department of Botany and Microbiology National University of Uzbekistan King Saud University Tashkent, Uzbekistan Riyadh, Riyadh, Saudi Arabia ISSN 2512-1901 ISSN 2512-1898 (electronic) Microorganisms for Sustainability ISBN 978-981-10-5513-3 ISBN 978-981-10-5514-0 (eBook) https://doi.org/10.1007/978-981-10-5514-0 Library of Congress Control Number: 2017963993 © Springer Nature Singapore Pte Ltd. 2018 This work is subject to copyright. All rights are reserved by the Publisher, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilms or in any other physical way, and transmission or information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed. The use of general descriptive names, registered names, trademarks, service marks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. The publisher, the authors and the editors are safe to assume that the advice and information in this book are believed to be true and accurate at the date of publication. Neither the publisher nor the authors or the editors give a warranty, express or implied, with respect to the material contained herein or for any errors or omissions that may have been made. The publisher remains neutral with regard to jurisdictional claims in published maps and institutional affiliations. Printed on acid-free paper This Springer imprint is published by Springer Nature The registered company is Springer Nature Singapore Pte Ltd. The registered company address is: 152 Beach Road, #21-01/04 Gateway East, Singapore 189721, Singapore Foreword Abiotic and biotic stresses affect the productivity and quality of agroecosystems around the globe. Indiscriminate use of chemicals to enhance the crop productivity has further aggravated the problem. The agroecosystems not only have become more and more polluted but also have become stressed due to the unhealthy prac- tices. The use of chemicals such as pesticides and fertilizers have made the soil saline, polluted water bodies, and also resulted in the loss of biodiversity besides being dangerous to humans and other organisms. Several plant beneficial microbes have been affected by the uncontrolled use of harmful chemicals in fields. Although these chemicals resulted in the green revolution, scientists, agriculturists, and gov- ernments now know the adverse effects of the chemical-induced green revolution. The problem has been further worsened due to the impact of climate change result- ing from urbanization, industrialization, and the ever-increasing human population. One of the major challenges faced by mankind is to feed the swelling human popu- lation. Food and nutritional security is one of the biggest tasks of the present time. The task becomes even more challenging because the sustainability and diversity of the agroecosystems have to be maintained. The solution is the use of green approaches in agriculture and lesser reliance on the harmful chemicals. Plant benefi- cial microbes are the symbiotic partners of almost all the plant species known and can be exploited to enhance the quality and quantity of food production. These microorganisms also known as plant growth-promoting microbes are the only alter- natives for the harmful chemicals. Already, the use of biofertilizers and biopesti- cides is being encouraged around the globe. However, we still need to understand the mechanisms using latest biotechnological tools to properly utilize these useful microbes in enhancing the productivity and maintaining the health of the plant. Researchers working in the area of agriculture microbiology and biotechnology know that the next “green revolution” which will provide healthy and balanced diet simultaneously maintaining the sustainability of agroecosystems will be through the use of these plant beneficial microbes. Plant beneficial microbes interact with the plant and help it in its survival and ability to fight the biotic and abiotic stresses. These microbes also known as “plant microbiome” provide nutrients to the plant and also combat phytopathogens by v vi Foreword diverse mechanisms. It is essential to understand the mechanisms of interactions between the plant and its microbiome so as to exploit it for providing nutrition; fighting abiotic stresses such as salinity, temperature, and drought; or even control- ling the phytopathogens. The plant microbiome plays an even more important role in hostile conditions. After going through the book Plant Microbiome: Stress Response, I would like to congratulate the editors, Dr. Dilfuza Egamberdieva and Dr. Parvaiz Ahmad, for covering the diverse aspects of plant-microbe interactions particularly in relation to biotic and abiotic stresses. The editors are renowned sci- entists in the domain area of this volume and have also roped in contributions from eminent researchers from around the globe working in the area of plant-microbe interactions in relation to environmental and biotic stresses. Chapters included in the volume provide the fundamental knowledge of the diversity of plant microbi- ome and its role in combating the stresses in plants. The work presented in the vol- ume also throws light on how the plant microbiome is important for the survival and how it elicits the stress tolerance responses in the plant particularly in hostile condi- tions. The tome also provides the inputs related to the utilization of useful plant- associated microbes in enhancing the productivity and yields of stressed ecosystems. With ever-increasing mouths to feed, it is very important that we use the marginal- ized and stressed agroecosystems for better productivity. The book covers the aspects of utilization of plant microbiome to enhance the productivity of stressed agroecosystems in a holistic and sustainable manner. Latest tools and techniques of molecular biology and metabolomics to study the intricacies of plant-microbe inter- actions at the molecular and biochemical level have been explained and used. The work presented in the volume also invokes the thought for future directions of research in the area of utilization of plant microbiome for enhancing yields of hos- tile and marginalized agroecosystems. The effort, reviews, and research put in the volume are up to the mark and need of the hour. The book will be very useful for the scholars, students, and researchers working in the field of plant-microbe interac- tions particularly related to stress response and management. The future of mankind is in using such green approaches so as to make our platter free of toxics and full of nutrients and for food security of each and every human living on this planet. I once again congratulate the editors and the contributors for this timely volume with futur- istic and sustainable approach. Professor, School for Environmental Science Naveen Kumar Arora BBA University Lucknow, UP, India About the Series Editor Prof. Naveen Kumar Arora PhD in microbiology, Professor in School for Environmental Sciences, Babasaheb Bhimrao Ambedkar University (a Central University), Lucknow, Uttar Pradesh, India, is a renowned researcher in the field of environmental microbiology and biotechnology. His specific area of research is rhi- zosphere biology and Plant Growth Promoting Rhizobacteria (PGPRs). He has more than 50 research papers published in premium international journals and sev- eral articles published in magazines and dailies. He is editor of three books, pub- lished by Springer. He is member of a number of national and international societies and reviewer of several international journals. He has delivered lectures in confer- ences and seminars around the globe. He has a long-standing interest in teaching at the postgraduate level and is involved in teaching courses in bacteriology, microbial physiology, environmental microbiology, agriculture microbiology, and industrial microbiology. He has been advisor to 57 postgraduate and 8 doctoral students. Recently he was awarded for excellence in research by the Honorable Governor of Uttar Pradesh. Although an academician and researcher by profession, he has a huge obsession for wildlife and its conservation and has authored a book, Splendid Wilds. He has a dedicated website, www.naveenarora.co.in, for the cause of wildlife and environment conservation. vii Contents 1 Diversity, Functions, and Stress Responses of Soil Microorganisms ....................................................................................... 1 Shyam Narain Pandey, Murtaza Abid, and Mirza Mohammad Abid Ali Khan 2 Harnessing the Plant Microbiome for Improved Abiotic Stress Tolerance ....................................................................................... 21 Syed Sarfraz Hussain, Samina Mehnaz, and Kadambot H.M. Siddique 3 Plant Growth Promotion and Biocontrol Mediated by Plant-Associated Bacteria ................................................................. 45 Miguel A. Matilla and Tino Krell 4 Arbuscular Mycorrhizal Fungi and Plant Stress Tolerance ............... 81 Abeer Hashem, Elsayed Fathi Abd_Allah, Abdulaziz A. Alqarawi, and Dilfuza Egamberdieva 5 Trichoderma: Beneficial Role in Sustainable Agriculture by Plant Disease Management ............................................................... 105 Laith Khalil Tawfeeq Al-Ani 6 Role of Secondary Metabolites from Plant Growth-Promoting Rhizobacteria in Combating Salinity Stress ......................................... 127 Jitendra Mishra, Tahmish Fatima, and Naveen Kumar Arora 7 Plant Hormones as Key Regulators in Plant- Microbe Interactions Under Salt Stress ..................................................................................... 165 Dilfuza Egamberdieva, Stephan Wirth, and Elsayed Fathi Abd_Allah 8 Nitric Oxide as a Signaling Molecule in Plant-B acterial Interactions .............................................................................................. 183 Anukool Vaishnav, Sushil K. Sharma, Devendra Kumar Choudhary, Kanti Prakash Sharma, Ees Ahmad, Mahaveer P. Sharma, Aketi Ramesh, and Anil Kumar Saxena ix x Contents 9 Quorum Sensing: Melody Beneath the Ground ................................... 201 Javid A. Parray, Sumira Jan, Mohammad Yaseen Mir, Nowsheen Shameem, and Azra N. Kamili 10 From Interaction to Gene Induction: An Eco- friendly Mechanism of PGPR-Mediated Stress Management in the Plant .......................... 217 Yachana Jha and R.B. Subramanian 11 Predisposition of Crop Plants to Stress Is Directly Related to Their DNA Health............................................................................... 233 Murat Dikilitas, Sema Karakas, and Parvaiz Ahmad 12 Legume, Microbiome, and Regulatory Functions of miRNAs in Systematic Regulation of Symbiosis .................................................. 255 Syed Sarfraz Hussain, Meeshaw Hussain, Muhammad Irfan, and Kadambot H.M. Siddique 13 Plant-Microbe-Metal Interactions: Basics, Recent Advances, and Future Trends ................................................................................... 283 Rahul Mahadev Shelake, Rajesh Ramdas Waghunde, Eugene Hayato Morita, and Hidenori Hayashi 14 Potential of Endophytic Bacteria in Heavy Metal and Pesticide Detoxification ........................................................................................... 307 Anket Sharma, Vinod Kumar, Neha Handa, Shagun Bali, Ravdeep Kaur, Kanika Khanna, Ashwani Kumar Thukral, and Renu Bhardwaj 15 Microbial Siderophores in Metal Detoxification and Therapeutics: Recent Prospective and Applications .................... 337 Resham Sharma, Renu Bhardwaj, Vandana Gautam, Sukhmeen Kaur Kohli, Parminder Kaur, Ravinder Singh Bali, Poonam Saini, Ashwani Kumar Thukral, Saroj Arora, and Adarsh Pal Vig 16 Linking Plant Nutritional Status to Plant- AMF Interactions............. 351 Amanda Azevedo Bertolazi, Muriel da Silva Folli-Pereira, Gustavo Caione, Lucas Zanchetta Passamani, Carlos Moacir Colodete, Sávio Bastos de Souza, Alessandro Coutinho Ramos, Nazima Rasool, Getúlio de Freitas Seben Júnior, and Evandro Luiz Schoninger
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