27 Advances ni Biochemical Engineering/ Biotechnology Managing Editor: ~ A. Fieehter Co-Editor" Th. W. Jeffries ISBN 3-540-12182-X Springer-Verlag Berlin Heidelberg New York ISBN O-387-12182-X Springer-Verlag New York Heidelberg Berlin This work is subject to copyright. All rights are reserved, whether the whole or part of the material is concerned, specifically those of translation, reprinting, reuse of illustrations, broadcasting, reproduction by photocopying machine or similar means, and storage in data banks. Under 5 54 of the German Copyright Law where copies are made for other than private use, a fee is payable to ,,VerwertungsgesellschachaR Wart”, Munich. 0 by Springer-Verlag Berlin Heidelberg 1983 Library of Congress Catalog Card Number 72-152360 Printed in GDR The use of registered names, trademarks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for genera1 use. 215213020-543210 sesotneP dna ningiL With Contributions by Y .K Chan, A. Fiechter, Ch.-Sh. Gong, .N .B Jansen, H. Janshekar, Th.W. ,seirffeJ .C .P Kurtzman, .R Maleszka, L.D. McCracken, .L Neirinck, .H Schneider, T ,ynsezczS .G .T Tsao, I.A.Veliky, ,ykseloV.B .P .Y Wang With 64 Figures and 64 Tables r Springer-Verlag Berlin Heidelberg NewYork Tokyo 3891 Managing Editor Professor Dr. A. Fiechter Institut f/Jr Biotechnologie Eidgen6ssische Technische Hochschule, H6nggerberg, CH-8093 Zfirich Co-Editor: Th. W. Jeffries Editorial Board Prof. Dr. S. Aiba Department of Fermentation Technology, Faculty of Engineering, Osaka University, Yamada-Kami, Suita- Shi, Osaka 565, Japan Prof. Dr. B. Atkinson University of Manchester, Dept. Chemical Engineering, Manchester/England Prof. Dr. E. Bylinkina Head of Technology Dept., National Institute of Antibiotika. 3a Nagatinska Str., Moscow M-105/USSR Prof. Dr. Ch. L. Cooney Massachusetts Institute of Technology, Department of Chemical Engineering, Cambridge, Massachusetts 02139/USA Prof. Dr. H. Dellweg Techn. Universit~it Berlin, Lehrstuhl fiir Biotechnologie, SeestraBe ,31 D-1000 Berlin 56 Prof. Dr. A. L. Demain Massachusetts Institute of Technology, Dept. of Nutrition & Food Sc., Room 56-125, Cambridge, Mass. 02139/USA Prof. Dr. S. Fukui Dept. of Industrial Chemistry, Faculty of Engineering, Sakyo-Ku, Kyoto 606, Japan Prof. Dr. K. Kieslich Wissenschaftl. Direktor, Ges. ri./f Biotechnolog. Forschung mbH, Mascheroder Weg ,1 D-3300 Braunschweig Prof. Dr. R. M. Lafferty Techn. Hochschule Graz, Institut fiir Biochem. Teehnol., Schl6gelgasse 9, A-8010 Graz Prof. Dr. K. Mosbach Biochemical Div., Chemical Center, University of Lund, S-22007 Lurid/Sweden Prof. Dr. H. L. Rehm Westf. Wilhelms Universit/it, Institut ftir Mikrobiologie, Tibusstrale 7-15, D-4400 Miinster Prof. Dr. P. L. Rogers School of Biological Technology, The University of New South Wales. PO Box ,1 Kensington, New South Wales, Australia 2033 Prof. Dr. H. Sahm Institut fiir Biotechnologie, Kernforschungsanlage Jiilieh, D-5170 J/ilich Prof. Dr. K. Schiigerl Institut fiir Technische Chemic, 'Universit~it Han nover, CallinstraBe ,3 D-3000 Hannover Prof. Dr. H. Suomalainen Director, The Finnish State Alcohol Monopoly, Alko, P.O.B. 350, 00101 Helsinki 10/Finland Prof. Dr. S. Suzuki Tokyo Institute of Technology, Nagatsuta Campus, Research Laboratory of Resources Utilization 4259, Nagatsuta, Midori-ku, Yokohama 227/Japan Prof. Dr. H.Taguchi Faculty of Engineering, Osaka University, Yamada-kami, Suita-shi, Osaka 565/Japan Prof. Dr. G. T. Tsao Director, Lab. of Renewable Resources Eng., A. A. Potter Eng. Center, Purdue University, West Lafayette, IN 47907/USA Table of Contents Utilization of Xylose by Bacteria, Yeasts, and Fungi Th. W. Jeffries . . . . . . . . . . . . . . . . . . . . . D-Xylose Metabolism by Mutant Strains of Candida sp. L. D. McCracken, Ch.-Sh. Gong . . . . . . . . . . . . 33 Ethanol Production from D-Xylose and Several Other Carbohydrates by nelosyhcaP sulihponnat and Other Yeasts H. Schneider, R. Maleszka, L. Neirinck, I. A. Veliky, P. Y. Wang, Y. K. Chan . . . . . . . . . . . . . . . . 57 Biology and Physiology of the D-Xylose Fermenting Yeast nelosyhcaP snlihponnat C. P. Kurtzman . . . . . . . . . . . . . . . . . . . . 73 Bioconversion of Pentoses to 2,3-Butanediol by alleisbelK eainomnenp N. B. Jansen, G. T. Tsao . . . . . . . . . . . . . . . . 85 Bacterial Conversion of Pentose Sugars to Acetone and Butanol B. Volesky, T. Szczesny . . . . . . . . . . . . . . . . 101 Lignin: Biosynthesis, Application, and Biodegradation H. Janshekar, A. Fiechter . . . . . . . . . . . . . . . 911 Author Index Volumes 1-27 . . . . . . . . . . . . . . . 971 Utilization of Xylose yb Bacteria, Yeasts, dna ignuF Thomas W. Jeffries* Microbiologist. Forest Products Laboratory, U.S. Dept. of Agriculture, P.O. Box 5130, Madison, Wisconsin 53705, U.S.A. 1 Introduction ..................................................................... 2 1.1 Distribution of Pentoses in Lignocellulosic Residues ............................... 3 2.1 Recovery of Hemicellulosic Sugars .............................................. 6 2 D-Xylose Metabolism ............................................................. 7 1.2 Transport .................................................................... 8 2.1.1 Bacteria ..................................... .. .......................... 8 2.1.2. Yeasts and Fungi ........................................................ 9 2.2 Conversion of D-Xylose to D-Xylulose-5-Phosphate ......................... ....... 01 2.2.1 Isomerization ..... " ....................................................... 11 2.2.2 Reduction, Oxidation, and Polyol Formation ................................ 21 2.2.3 Phosphorylation ......................................................... 31 2.3 The Pentose Phosphate Pathway ................................................ 41 2.4 Phosphoketolase ......................................... 2 .................... 51 3 Regulation of D-Xylose Metabolism ................................................. 61 1.3 Aerobic and Anaerobic Utilization of D-Xylose ................................... 71 3.2 D-Glucose-6-Phosphate Dehydrogenase .......................................... 02 3.3 Nutritional Factors ............................................................ 12 4 Utilization of D-Xylose, D-Xylulose, and Xylitol by Yeasts and Fungi ................... 22 1.4 D-Xylose ..................................................................... 22 4.2 D-Xylulose ................................................................... 32 4.3 Xylitol ....................................................................... 24 4.4 Sugar Mixtures ............................................................... 24 4.5 Hydrolysates of HemiceUulose .................................................. 52 5 Depolymerization and Fermentation ................................................ 26 6 Implications for Strain Selection and Process Design .................................. 26 7 Acknowledgements ............................................................... 82 8 References ....................................................................... 82 Hemicellulosic sugars, especially D-xylose, are relatively abundant in agricultural and forestry residues. Moreover, they can be recovered from the hemicelluloses by acid hydrolysis more readily and in better yields than can D-glucose from cellulose. These factors favor hemicellulosic sugars as a feedstock for production of ethanol and other chemicals. Unfortunately, D-xylose is not so readily utilized as D-glucose for the production of chemicals by microorganisms. The reason may lie in the biochemical pathways used for pentose and hexose metabolism. Different pathways are employed by prokaryotes and eukaryotes in the initial stages of pentose assimilation. Transport and pbosphoryla- tion possibly limit the overall rate of D-xylose utilization. The intermediary steps of pentose metabo- lism are generally similar for both bacteria and fungi, but substantial variations exist. Phosphoketolase is present in some yeasts and bacteria able to use pentoses. Regulation of the oxidative pentose phosphate pathway occurs at D-glucose-6-phosphate dehydrogenase by the intracellular concentra- tion of NADPH. Regulation of nonoxidative pentose metabolism is not well understood. In some * Maintained in cooperation with the University of Wisconsin. 2 T.W. Jeffries yeasts and fungi, conversion of D-xylose to ethanol takes place under aerobic or anaerobic conditions with rates and yields generally higher in the former than in the latter. Xylitol and acetic acid are major byproducts of such conversions. Many yeasts are capable of utilizing D-xylose for the production of ethanol. Direct conversion of D-xylose to ethanol is comPared with two-stage processes employing yeasts and D-xylose isomerase. I Introduction Hemicellulosic sugars in acid hydrolysates of hardwoods and agricultural residues could become important feedstocks for the production of ethanol and other chemicals by microbial processes. Several factors favor their use: they are relatively abundant in a variety of common lignocellulosic residues; they can be recovered by mild acid hydrolysis; and new microbiological processes are being developed for their conver- sion. Within the past 2 years, several significant findings have advanced the prospects for PrOduction of ethanol and other d':micals from D-xylose. First, yeasts, which were previously considered unable to ferment 1 5-carbon sugars, have now been shown HIGH-FRUCTOSE CORN ~ CORN SYRUP Wet Glucose milling STARCH J ESOCULG j is~ , OIL Amylase Ferman- - + tation GLUTEN ETHANOL, YEAST HARDWOODS OR ~ XYLULOSEI AGRICULTURAL RESIDUES Glucose ~ I I ~ isomerase -~ Acid = XYLOSE + Fermentation prehydrotysis GLUCOSE 1 CELLULOSE Fermentation + ,= HEAT, FEED ETHANOL, LIGNIN ~ OTHER CHEMICALS, YEAST, ANIMAL FEED secnavdA .i Sio. Eng. Fig. .1 Comparison of ethanol production from grain and lignocellulosic residues. (M 151671). For definition see footnote 1 The term "fermentation" and its various derivatives is used herein to refer to dissimilatory metabolic processes through which an organic substrate is converted into oxidized and reduced products without a net overall change in the oxidation state. noitazilitU of esolyX by ,airetcaB ,stsaeY dna Fungi 3 to utilize the pentulose D-xylulose under anaerobic conditions x-5). Since D-xylulose can be formed from D-xylose through the action of glucose isomerase (actually xylose isomerase) ,6 ,)7 processes have been developed employing two-stage isomeriza- tion and fermentation 8-12). Second, several yeasts, particularly those belonging to the genera Pachysolen )51-ax and Candida 16- la), have been shown to convert D-xylose to ethanol under aerobic and anaerobic conditions. Besides these recent findings, it is known that certain fungi, particularly Fusarium lini ,9-23), are capable of converting D-xylose to ethanol; and various bacteria can form several potentially useful products such as ethanol, acetic acid, 2,3-butanediol, acetone, isopropanol, and n-butanol from D-xylose ~-29). Finally, unlike the fermentation of sugar from grains, utilization of pentoses derived from forestry and agricultural residues for the production of chemicals does not decrease food supplies; indeed, by virtue of the production of microbial biomass and unutilized sugars, such processes can supplement animal feed resources (Fig. .)1 This review attempts to examine recent microbiological findings in relation to the previous understanding of D-glucose fermentation and pentose metabolism. It briefly examines the availability of hemicellulosic sugars -- particularly D-xylose -- in lignocellulosic residues, reviews aspects of pentose metabolism and metabolic regula- tion of fermentative processes, and discusses some recent research progress on aerobic and anaerobic conversions of D-xylose to ethanol by yeasts and bacteria. The 2,3- butanediol fermentation and the butanol/acetone/ethanol fermentations are reviewed in other chapters of this volume. 1.1 Distribution of Pentoses in Lignocellulosie Residues Hemicelluloses are widely distributed, major components of lignocellulosic materials comprised of neutral sugars, uronic acids, and acetal groups, all present as their respective anhydrides (e.g., the anhydride of D-xylose is xylan). As the anhydrides, hemicellulosic sugars average about 26 ~ of the dry weight of hardwoods, 2 and 22 of softwoods and about 25 ~ of several major agricultural residues. Pectin, ash, and protein account for variable fractions in lignocellulosic materials, whereas cellulose (anhydro o-glucose) and lignin make up the balance (Table .)1 The xylan and arabinan contents of hemicelluloses vary with the plant species. The xylan content of hardwoods is generally much higher than that of softwoods, ranging between 11 ~ and 25 ~ in the former and between 3 ~ and 8 ~ in the lat- ter 3o-a2). Hemicelluloses in hardwoods contain appreciable amounts of D-xylose, D-mannose, acetyl, and uronic acid. The acetyl content ranges between 3 ~ and 4.5 o~ in hardwoods and between 1 ~ and 5.1 ~ in softwoods; uronic acid (as the anhydride) ranges between 3 o~ and 5 ~ in both hardwoods and softwoods .)oa In conifers, the predominant hemicellulosic sugar is o-mannose, which, as mannan, averages about 11, ~ of the total dry weight .)23 Whereas the xylan content of softwoods is lower than in hardwoods, the lignin content is higher. The predominant hemicellulosic sugar of agricultural residues is D-xylose. The xylan content of corn residues varies 2 ehT word "hardwoods" srefer to defael-daorb trees )smrepsoigna( dna sah nothing to do with eht ssendrah of eht .sdoow ,ylralimiS "softwoods" refers to suorefinoc trees .)smrepsonmyg( 4 T.W. seirffeJ from about 17 ~ in the leaves and stalks to 13 ~ in the cobs, but, on the average, it comprises about 24~ of the total dry weight of corn stover (L. H. KruU, personal communication). The chemistry of the hemicelluloses of grasses has been reviewed recently )53 Table .1 Proximate composition of various biomass resources of total dry weight Glu- Galac- Man- Arabi- Xylan Hemi- Hemi- Cellu- Lignin a Ref. can tan nan nan cellu- cellu- esol ~ losic esol b sugars a Hardwoods 05 8.0 5.2 5.0 4.71 2.62 43 54 12 )23-03 sdoowtfoS 64 4.1 2.11 0.1 7.5 3.22 82 34 92 )53-23 Wheat straw 53 7.0 4.0 4.4 91 5.82 -- 13 41 )43-sa Corn stalks 5.63 1.1 6.0 1.2 2.71 5.72 -- 03 -- )43-33 Soybean residue 83 8.1 4.2 0.1 5.21 7.81 -- 73 -- )43-33 a Reported as anhydrides; b Includes acetyl- and uronic-acid residues; c Residual glucan following acid prehydrolysis; d Analyzed as Klason lignin (acid-insoluble) Overall, it would appear that the high hexose (D-glucose plus D-mannose) content of softwoods would favor their utilization as fermentation feedstocks. Presently, however, most softwood residues find their way into pulping operations because of the favorable fiber characteristics of conifer species. In contrast, hardwood residues have much less value for paper production and are generally burned for the generation Table .2 Estimated and projected total agri- cultural residues in the United States ,63 )Ta Material Quantity 0891 0002 601 ODT Corn residue I00 241 Wheat straw 101 78 Soybean residue 89 951 Other grains 75 47 Other agricultural products 82 53 Totals 583 794