Novel Approaches in Biosensors and Rapid Diagnostic Assays 43rd OHOLO Conference Eilat, Israel, October 10-14, 1999 NOVEL APPROACHES IN BIOSENSORS AND RAPID DIAGNOSTIC ASSAYS Israel Institute for Biological Research Ness-Ziona, Israel US-Israel Science and Technology Commission Scientific Organizing Committee Zvi Liron, Avraham Bromberg, Morly Fisher, Yoram Yahav Scientific Advisory Committee D. Walt, H. Vogel, I. Willner, S. Marx, F. Fish, D. Katz Permanent Organizing Committee A. Shafferman, A. Golombek, S. Kinamon Novel Approaches in Biosensors and Rapid Diagnostic Assays Edited by Zvi Liron Avraham Bromberg and Morly Fisher Israel Institute for Biological Research Ness-Ziona, Israel Springer Science+Business Media, LLC Library of Congress Cataloging-in-Publication Data Novel approaches in biosensors and rapid diagnostic assays/edited by Zvi Liron, Avraham Bromberg, and Morly Fisher, p. ; cm. Includes bibliographical references and index. ISBN 978-1-4613-5452-9 ISBN 978-1-4615-1231-8 (eBook) DOI 10.1007/978-1-4615-1231-8 1. Biosensors—Congresses. I. Liron, Zvi. II. Bromberg, Avraham. III. Fisher, Morly. IV. OHOLO Conference (43rd: 1999: Eilat, Israel) [DNLM: 1. Biosensing Techniques—Congresses. 2. Biological Assay—Congresses. QT 36 N937 2000] R857.B54 N685 2000 610'.28—dc21 00-046608 Proceedings of the 43rd OHOLO Conference on Novel Approaches in Biosensors and Rapid Diagnostic Assays, held October 10-14, 1999, in Eilat, Israel ISBN 978-1-4613-5452-9 ©2001 Springer Science+Business Media New York Originally published by Kluwer Academic/Plenum Publishers, New York in 2001 Softcover reprint of the hardcover 1 st edition 2001 http://www.wkap.nl/ 10 9 8 7 6 5 4 3 21 A CLP. record for this book is available from the Library of Congress All rights reserved No part of this book may be reproduced, stored in a retrieval system, or transmitted ni any form or by any means, electronic, mechanical, photocopying, microfilming, recording, or otherwise, without written permission from the Publisher PREFACE In the medical, food, and environmental fields there is a continuous demand for inexpensive and sensitive analytical devices that are reliable, rapid, capable of high throughput screening, and have low cost per test unit. Small and portable biosensor devices are designed to fulfill most of these requirements, and can be used in laboratory and on-site field testing. The multidisciplinary nature of biosensors research was illuminated by the topics presented in the 43rd OHOLO conference on "Novel Aproaches in Biosensors and Rapid Diagnostic Assays" held in Eilat, Israel in October 1999. This conference proceedings volume discussed major issues in optical, acoustic and electrochemical-based biosensors, biochips, sensing recognition elements, and biosensors for medical and environmental applications. The papers presented at the conference represent basic and applied research studies in the fields of diagnostic assays and biosensor development. Novel technologies, such as arrays of sensors using high-density fiber optics to sense labeled or unlabeled oligonucleotides, and patterned arrays of recognition elements, demonstrated the capability of biosensors to analyse multiple analytes. Optical techniques, such as thin film metal oxide waveguides, have been applied for sensor development. Acoustic wave devices were used in the study of biochemical macromolecules and cells immobilized within the sensor-liquid interface, and were also utilized to monitor antigen-antibody and ligand-receptor interactions. Electro chemical techniques have been utilized to monitor DNA hybridization in real time, and in the development of screen-printed electrodes based on enzyme amplification. These techniques have been used also in development of new DNA sensors and immunosen sors based on biocatalyzed precipitation of insoluble products, and in the development of new bioelectrodes based on noble metal nanoparticles composite sol-gel instead of the traditional carbon particles. The potential of synthetic receptors prepared form imprinted polymers as recog nition elements was demonstrated by the binding of caffeine to the tailored cavity formed in the presence of caffeine and monitored by an acoustic sensor. Optimized polymer imprinting techniques have been achieved by using nano-imprinted particles, composite imprints, and surface impriting. Bio-recognition elements such as the v vi PREFACE avidin-biotin system or cell membrane receptors were demonstrated for sensing and for signal transduction. The new biochip technology enabled comprehensive studies of neuronal nicotinic acetylcholine receptor response in physiological conditions. Standardization of these techniques is necessary in DNA analysis. Polymer materials have been utilized in development of a new inexpensive disposable sensor based on reflection holograms, in colorimetric sensor based on self-assembled polymers, and in the development of new latex microspheres widely used in medical diagnostic applications. Microsphere utili zation was also demonstrated in the luminescence oxygen channeling assay. Overviews of past and present rapid diagnostic methods used in microbiology as well as new advanced technologies for detection of biological materials in the natural environment were presented. Practical medical applications have been demonstrated in studies of continuous and direct in situ measurements of temporal variations in the oxygen partial pressure during photodynamic therapy, and in the study of glucose monitoring by combined iontophoretic extraction with an in situ glucose sensor. Last but not least, the interaction among participants from different countries and of different expertise and the informal discussions were vital to the success of the conference. We are grateful to all contributors to this book and special thanks should be expressed to our colleagues: D. Walt, H. Vogel, I. Willner, S. Marx, A. Raz and N. Kaushansky. ACKNOWLEDGMENTS The Organizing Committee gratefully acknowledges the generous financial contribu tion of the following organizations: U.S.-Israel Science & Technology Commission, Tel-Aviv, Israel Ministry of Tourism, Jerusalem, Israel vii CONTENTS 1. Analyzing Unamplified Gene Sequences with High Density Optical Fiber Arrays . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 Frank J. Steemers, Jane A. Ferguson, and David R. Walt 2. Array Biosensor for Simultaneous Detection of Multiple Analytes 7 Fraces S. Ligler, James W. Hazzard, Joel P. Golden, and Chris A. Rowe 3. Acoustic Wave Study of Interfacially-Bound Proteins, Nucleic Acids and Blood Platelets ........................................... 17 M. Thompson, B. A. Cavic, L. M. Furtado, Z. Morel, and N. Tassew 4. High Frequency Acoustic STW Biosensor ........................ 33 Zvi Liron, Nathali Kaushansky, Netzach Graziani, Avi Keysary, Itzhak Barness, and Sharon Marx 5. Ultrasensitive and Specific Electronic Transduction of DNA Sensing Processes ................................................... 47 Itamar Willner, Fernando Patolsky, Lital Alfonta, Amir Lichtenstein, and Bilha Willner 6. Enzyme-Amplified Amperometric Detection of Hybridization and of a Single Base Pair Mutation in an 18 Base Oligonucleotide on a 7 IJ..m Diameter Microelectrode ............................. 79 Daren J. Caruana, Thierry de Lumley-Woodyear, and Adam Heller 7. Development and Application of Bioelectrochemical Sensors for On-Site Monitoring ........................................... 101 l. Eshkenazi, T. Neufeld, V. Sacks, Y. Herschkovitz and J. Rishpon 8. Sol-Gel Derived Composite Ceramic Carbon Biosensors 111 L. Rabinovich and o. Lev ix x CONTENTS 9. Holographic Biosensors ....................................... 127 Christopher R. Lowe, Andrew G. Mayers, Jeff Blyth, and Roger B. Millington 10. Waveguide Fluorosensor for the Detection of Ligand-Receptor Interactions: The 5-HT 3 Serotonin Receptor ....................... 135 Evelyne L. Schmid, Ruud Hovius, Michael Pawlak, Markus Ehrat, and Horst Vogel 11. Importance of Biochips in the Study of Neuronal Nicotinic Acetylcholine Receptors: Biochips and Nicotinic Receptors .......... 147 Y. Villiger, M. O. Heusckel, J. Romand, K. H. Karuse, P. Renaud, and D. Bertrand 12. Improving DNA-Chip Technology: Chemical Aspects. . . . . . . . . . . . . . . 165 Jorg D. Hoheisel, Frank Diehl, Marcel Scheideler, Nicole Hauser, Verena Aign, Stefan Matysiak, and Markus Beier 13. The Application of Biorecognition . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 173 Meir Wilchek, Heike Hofstetter, and Oliver Hofstetter 14. The Use of Imprinted Polymers as Recognition Elements in Biosensors and Binding Assays. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 193 Ecevit Yilmaz, Lei Ye, Karsten Haupt, and Klaus Mosbach 15. Molecular Imprinting and Chemical Sensing: Synthetic Antibodies 211 F. L. Dickert, K. Halikias, O. Hayden, P. Liu, and A. Rohrer 16. Electropolymerizable Bipyrrole-Biotin: A New Derivative for the Immobilization of Ligands onto Electrode Surfaces ................. 225 Karine Perie, Vitali Strokhin, Robert S. Marks, and Jean-Paul Lellouche 17. New Approaches to Rapid Diagnostics Using Bichromic Polymers and Organic Thin Films . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 235 Deborah H. Charych 18. Recent Uses of Microspheres in Diagnostic Tests and Assays. . . . . . . . . 245 Leigh B. Bangs 19. Luminescence Oxygen Channeling Assay (LOCI~): A Highly Sensitive and Versatile Homogeneous Assay Method . . . . . . . . . . . . . . . .. . . . . . . . 265 Nurith Kum CONTENTS xi 20. Direct and Continuous Measurements of Oxygen Partial Pressure Using a Tissue-Inserted Optical Oxygen Microsensor: During Photodynamic Therapy .................................................... 273 1. Zilberstein, Y. Salomon, A. Scherz, and A. Bromberg 21. Glucose Monitoring by Reverse Iontophoresis 285 Michael 1. Tierney 22. Rapid Methods of Microbiological Analysis: An Update . . . . . . . . . . . .. 295 Daniel Y. C. Fung 23. Revolutionary Technologies for Bio Detection 313 Midred A. Donlon Index...... . .... ....... . .......... . . . .... . .. ...... . . . ........ .. 319