biological and medical physics, biomedical engineering Pleaseviewavailabletitles inBiologicalAndMedicalPhysics,BiomedicalEngineering onserieshomepagehttp://www.springer.com/series/3740 biological and medical physics, biomedical engineering Thefieldsofbiologicalandmedicalphysicsandbiomedicalengineeringarebroad,multidisciplinaryand dynamic.Theylieatthecrossroadsoffrontierresearchinphysics,biology,chemistry,andmedicine.The BiologicalandMedicalPhysics,BiomedicalEngineeringSeriesisintendedtobecomprehensive,coveringa broadrangeoftopicsimportanttothestudyofthephysical,chemicalandbiologicalsciences.Itsgoalisto providescientistsandengineerswithtextbooks,monographs,andreferenceworkstoaddressthegrowing needforinformation. Booksintheseriesemphasizeestablishedandemergentareasofscienceincludingmolecular,membrane, andmathematicalbiophysics;photosyntheticenergyharvestingandconversion;informationprocessing; physicalprinciplesofgenetics;sensorycommunications;automatanetworks,neuralnetworks,andcellu- larautomata.Equallyimportantwillbecoverageofappliedaspectsofbiologicalandmedicalphysicsand biomedicalengineeringsuchasmolecularelectroniccomponentsanddevices,biosensors,medicine,imag- ing,physicalprinciplesofrenewableenergyproduction,advancedprostheses,andenvironmentalcontroland engineering. Editor-in-Chief: EliasGreenbaum,OakRidgeNationalLaboratory,OakRidge,Tennessee,USA EditorialBoard: MasuoAizawa,DepartmentofBioengineering, JudithHerzfeld,DepartmentofChemistry, TokyoInstituteofTechnology,Yokohama,Japan BrandeisUniversity,Waltham,Massachusetts,USA OlafS.Andersen,DepartmentofPhysiology, MarkS.Humayun,DohenyEyeInstitute, Biophysics&MolecularMedicine, LosAngeles,California,USA CornellUniversity,NewYork,USA PierreJoliot,InstitutedeBiologie RobertH.Austin,DepartmentofPhysics, Physico-Chimique,FondationEdmond PrincetonUniversity,Princeton,NewJersey,USA deRothschild,Paris,France JamesBarber,DepartmentofBiochemistry, LajosKeszthelyi,InstituteofBiophysics,Hungarian AcademyofSciences,Szeged,Hungary ImperialCollegeofScience,Technology andMedicine,London,England RobertS.Knox,DepartmentofPhysics andAstronomy,UniversityofRochester,Rochester, HowardC.Berg,DepartmentofMolecular NewYork,USA andCellularBiology,HarvardUniversity, Cambridge,Massachusetts,USA AaronLewis,DepartmentofAppliedPhysics, HebrewUniversity,Jerusalem,Israel VictorBloomfield,DepartmentofBiochemistry, UniversityofMinnesota,St.Paul,Minnesota,USA StuartM.Lindsay,DepartmentofPhysics RobertCallender,DepartmentofBiochemistry, andAstronomy,ArizonaStateUniversity, Tempe,Arizona,USA AlbertEinsteinCollegeofMedicine, Bronx,NewYork,USA DavidMauzerall,RockefellerUniversity, NewYork,NewYork,USA BrittonChance,DepartmentofBiochemistry/ Biophysics,UniversityofPennsylvania, EugenieV.Mielczarek,DepartmentofPhysics Philadelphia,Pennsylvania,USA andAstronomy,GeorgeMasonUniversity,Fairfax, Virginia,USA StevenChu,LawrenceBerkeleyNational Laboratory,Berkeley,California,USA MarkolfNiemz,MedicalFacultyMannheim, UniversityofHeidelberg,Mannheim,Germany LouisJ.DeFelice,DepartmentofPharmacology, VanderbiltUniversity,Nashville,Tennessee,USA V.AdrianParsegian,PhysicalScienceLaboratory, NationalInstitutesofHealth,Bethesda, JohannDeisenhofer,HowardHughesMedical Maryland,USA Institute,TheUniversityofTexas,Dallas, Texas,USA LindaS.Powers,UniversityofArizona, Tucson,Arizona,USA GeorgeFeher,DepartmentofPhysics, UniversityofCalifornia,SanDiego,LaJolla, EarlW.Prohofsky,DepartmentofPhysics, California,USA PurdueUniversity,WestLafayette,Indiana,USA HansFrauenfelder, AndrewRubin,DepartmentofBiophysics,Moscow LosAlamosNationalLaboratory, StateUniversity,Moscow,Russia LosAlamos,NewMexico,USA MichaelSeibert,NationalRenewableEnergy IvarGiaever,RensselaerPolytechnicInstitute, Laboratory,Golden,Colorado,USA Troy,NewYork,USA DavidThomas,DepartmentofBiochemistry, SolM.Gruner,CornellUniversity, UniversityofMinnesotaMedicalSchool, Ithaca,NewYork,USA Minneapolis,Minnesota,USA Nancy J. Woolf Avner Priel Jack A. Tuszynski Nanoneuroscience Structural and Functional Roles of the Neuronal Cytoskeleton in Health and Disease With 49 Figures 123 Dr. Nancy J. Woolf Prof. Jack A. Tuszynski U niversity of California University of Alberta Los Angeles Department of Physics Department of Psychology Edmonton AB T6G 1Z2 Lab. NanoNeuroscience Canada Los Angeles CA 90095-1563 [email protected] USA [email protected] Dr. A vner Priel University of Alberta Department of Physics Edmonton AB T6G 1Z2 Canada [email protected] ISSN1618-7210 ISBN978-3-642-03583-8 e-ISBN978-3-642-03584-5 DOI10.1007/978-3-642-03584-5 Springer Heidelberg Dordrecht London New York LibraryofCongressControlNumber: 2009942091 ©Spring er-VerlagBerlinHeidelberg 2009 This work is subject to copyright. All rights are reserved, whether the whole or part of the material is concerned,specificallytherightsoftranslation,reprinting,reuseofillustrations,recitation,broadcasting, reproductiononmicrofilmorinanyotherway,andstorageindatabanks.Duplicationofthispublicationor partsthereofispermittedonlyundertheprovisionsoftheGermanCopyrightLawofSeptember9,1965,in itscurrentversion,andpermissionforusemustalwaysbeobtainedfromSpringer.Violationsareliableto prosecutionundertheGermanCopyrightLaw. Theuseofgeneraldescriptivenames,registerednames,trademarks,etc.inthispublicationdoesnotimply, evenintheabsenceofaspecificstatement,thatsuchnamesareexemptfromtherelevantprotectivelawsand regulationsandthereforefreeforgeneraluse. Coverdesign:SPi Publisher Services Printedonacid-freepaper Springer is part of Springer Science+ Business Media ( www.springer.com) Preface Wewrotethisbooktodescribeanewemergingdisciplinethatintegratesneu- roscience and nanoscience yielding a unique perspective on the very complex organization of the material substrate for cognitive processes. Nanoneuro- sciencefocusesoncomputationallyrelevantbiomoleculesfoundinsideneurons. Because of recent technological advances at the nanometer scale, scientists have at their disposal increasingly better ways to study the brain and the biophysicsofitsmolecules.Duringthe pastcenturythe focusinneurobiology hasbeenontheneuronanditssynapses.Todaywecanexpandonthesebasic principles to include the biomolecules that determine operations of synapses and other computationally relevant functions performed inside dendrites. By expandingourscopeofknowledgeofwhatparticipatesinneuralcomputation, we exponentially expand the mind-brain computer analogy through the real- ization that each neuron has a processing capability conceivably reaching or evenexceedingthatofasilicon-basedmultiprocessor.Putsimply,oursynapses feedinformationintoamassivelypowerfulintraneuronalmatrixofcablesand conduits of information – a system we refer to as Nature’s nanowires. Although we review all the internal structures inside neurons, a central themeofthebookishowneurotransmittersactuponreceptormolecules,trig- gering signal transduction molecules that affect cytoskeletal filaments inside dendrites of neurons, whereupon cytoskeletal proteins contribute to informa- tion processing and fundamental operations of neurons. Multiple findings are presented supporting the notion that naturally occurring nanowires are not only basic to intracellular transport, but also of fundamental importance to learning,memory,andpossiblyevenhigherconsciousness.Wepresentourown research,as well as researchcoming out of other laboratories,with particular emphasis on the most recent findings. Why do we hypothesize that the inte- riors of neurons, in particular the cytoskeletalfilaments, play a role in higher cognitive function and how might they achieve that role? For one, the cy- toskeletonundergoes structuralchangeduring learning.Second,anabnormal cytoskeleton appears to be a primary etiological factor contributing to neu- rological disorders, such as Alzheimer’s disease, and to psychiatric disorders, VI Preface suchasbipolaraffectivedisorderandschizophrenia–disordersassociatedwith deficitsinmemoryfunctionorimpairedmentalstate.Third,cytoskeletalpro- teins are capable of propagating signals enabling them to form intracellular circuits that compute and then transmit information form one part of the neuron to another. This capability is well suited to accommodate cognitive operations. This book is intended as an accessible resource for those with interests in neural computation or brain mechanisms of higher cognition or disease states. Interested readers might be those with backgrounds in neuroscience, physics, physiology, psychology, biophysics, biochemistry, computer science, orbioengineering– orvirtuallyanyonewitha curiosityaboutthe brain-mind interface and what nanotechnology has revealed and might be expected to demonstrate in the years ahead. The book is virtually self-contained but we have provided the reader with numerous references so that more in-depth studies of individual topics covered in this book can be initiated. Manycolleagueshavefacilitatedoureffortsinthewritingofthisbook.We wouldliketothankallcurrentandpastcollaboratorswhohavecollecteddata or contributed to the core ideas conveyed in this book. First and foremost, Adele Behar contributed extensively to the research performed through her generous tangible support and much appreciated encouragement. In fact, we would like to dedicate this book to her as a token of our appreciation for her steadfastsupportovera number of yearsandfor her encouragementandmo- tivation to continue against many odds. Michael Weiner is similarly thanked for his gracious tangible support and numerous fascinating ideas and sugges- tions. Stuart Hameroff and others at the Center for Consciousness Studies at the UniversityofArizonaareowedagreatdebtformanyofthe originalideas reviewed and extended in this book. Horacio Cantiello and his colleagues at HarvardUniversityarecreditedwiththosebreakthroughsleadingtothemea- surement of signal conduction along biomolecules. Travis Craddock is grate- fully acknowledged for his Master’s thesis work on the double-well potential in the macromolecule tubulin, a particularly critical piece in the puzzle of how cytoskeletal proteins might compute outcomes. Lastly, Michelle Hanlon is thanked for her extensive work on finalizing the manuscript. Los Angeles, USA Nancy J. Woolf Edmonton, Canada Jack A. Tuszynski July 2009 Avner Priel Contents 1 Introducing Nanoneuroscience as a Distinct Discipline..... 1 1.1 The Definition of Nanoneuroscience........................ 2 1.2 Current Issues in Neuroscience ............................ 4 1.2.1 The Great Mysteries of Neuroscience: Higher Cognitive Functions ............................... 5 1.2.2 Neurological, Neurodevelopmental, and Neuropsychiatric Disorders: Prospects for Nanoneuroscience ................................. 12 1.3 Current Issues in Nanoscience............................. 15 1.3.1 The Origins of Nanoscience......................... 15 1.3.2 The Mission of Nanoscience......................... 16 1.3.3 Nanostructures, Nanoparticles, and Nanodevices ...... 17 1.4 Applications in Nanoneuroscience.......................... 19 1.4.1 Using Nanotechnology to Study Brain Tissue Response................................... 20 1.4.2 Nanoneuroscience Approaches to Neurological, Neurodevelopmental, and Neuropsychiatric Disorders... 22 References..................................................... 27 2 Nanoscale Components of Neurons: From Biomolecules to Nanodevices ............................................ 35 2.1 Intracellular Components of Neurons....................... 36 2.1.1 The Neuronal Membrane and Protein Complexes Related to Neurotransmission....................... 36 2.1.2 Ion Channels and Ligand-Binding Receptor Proteins... 38 2.1.3 Scaffolding Proteins, Signal Transduction Cascades, and Cell Adhesion Molecules........................ 45 2.1.4 DNA, mRNA, and the Golgi Apparatus in Neurons: Transcription, Translation, and Packaging in Synaptic Vesicles .......................................... 46 VIII Contents 2.1.5 The Neuronal Cytoskeleton......................... 50 2.1.6 Mitochondria in Neurons ........................... 63 2.2 Nanoengineering and Neurons............................. 65 2.2.1 Nanoparticles and Their Interactions with Receptors and Signal Transduction Molecules .................. 68 2.2.2 DNA Nanodevices................................. 69 2.2.3 Microtubule and Actin Filament Interactions with Nanomaterials .................................... 69 2.3 Future Directions of Nanodevice-Cell Hybrid Designs ........ 70 References..................................................... 73 3 The Cytoskeleton as a Nanoscale Information Processor ... 85 3.1 Electrical Properties of Actin and Actin Filaments........... 86 3.1.1 The Actin Monomer: Structure, Surface Charge, and Electric Dipole.................................... 87 3.1.2 Actin Filaments: Counterions and Charge Density Waves ........................................... 88 3.1.3 Actin Filaments: Electric Cable Properties............ 88 3.2 Electrical Properties of Tubulin and Microtubules ........... 90 3.2.1 Structure, Surface Charge, and Electric Dipole of Tubulin .......................................... 91 3.2.2 Distinct Tubulin Isoforms Differ in Their Biophysical Characteristics.................................... 94 3.2.3 Microtubules: Lattice Structure, Elastic Properties, Surface Charge, and Electric Dipole ................. 96 3.2.4 Microtubules: Ferroelectric and Pyroelectric Properties........................................ 97 3.2.5 Conductance of Electrical Signals Along Microtubules.. 98 3.3 Linking the Excitable Neuronal Membrane with the Cytoskeleton: Functional Implications......................101 3.3.1 Actin Filaments Connect the Neuronal Membrane with the Microtubule Matrix........................101 3.3.2 Does the Intracellular Cytoskeletal Matrix Compute and Determine Cell Structure and Function?..........103 3.3.3 Information Storage in the Intracellular Cytoskeletal Matrix: A Role in Memory .........................107 3.4 A Dendritic Cytoskeleton Information Processing Model......112 References.....................................................119 4 Nanocarriers and Intracellular Transport ..................129 4.1 Types of Transport in Neurons............................130 4.2 Motor, Adaptor, and Scaffolding Proteins...................131 4.2.1 Kinesins..........................................131 4.2.2 Dynein...........................................134 4.2.3 Myosin...........................................135 Contents IX 4.3 Mechanisms of Axonal Transport and Nanotechnology .......136 4.3.1 Axonal Transport of Neurotransmitter-Related Proteins..........................................138 4.3.2 Axonal Transport of Neurotrophins..................140 4.3.3 Axonal Transport of Cytoskeletal Proteins............142 4.4 Dendritic Transport .....................................143 4.4.1 Transport of Neurotransmitter Receptors into Dendrites ....................................144 4.4.2 Transport of mRNA into Dendrites ..................145 4.5 Cytoskeleton Transport Dynamics with Neural Injury, Regeneration, and Morphogenesis..........................148 4.5.1 Acute Responses to Neuronal Insult .................149 4.5.2 Transport Regulation in Regeneration and Morphogenesis ....................................151 4.6 Cytoskeletal Transport in Learning and Memory ............153 4.7 Biophysical Models of Transport ..........................155 4.8 Bioengineering of Transport Molecules and Hybrid Biological Devices ................................................160 References.....................................................163 5 Nanotechnology, Nanostructure, and Nervous System Disorders ..................................................177 5.1 Identifying Nanomechanical Dysfunction in Nervous System Disorders...............................................178 5.2 Neurodevelopmental Disorders: Cytoskeletal Protein Abnormalities and Impaired Transport .....................178 5.2.1 Fragile X Syndrome: Impaired mRNA Transport ......179 5.2.2 Turner Syndrome: Failure of Dendrite Pruning .......180 5.2.3 WilliamsSyndrome:DeletionsofCytoskeleton-Related Proteins .........................................181 5.2.4 Autism Spectrum Disorder: Disruptions of MAPs Due to Deletions of MAP Kinase and Reelin Genes ........182 5.2.5 Rett Syndrome: Decreases in MAP2 Possibly Linked to Mutations of the MCEP2 Gene ...................183 5.2.6 Down Syndrome: Early and Late Defects in the Microtubule and Actin Cytoskeleton .................183 5.3 NeurologicalDisorders Involving Nanomechanical Dysfunction 185 5.3.1 Neuromuscular Disorders and Disrupted Axonal Transport ........................................185 5.3.2 Nanomechanical Dysfunction in Alzheimer’s Disease: Tauopathies and Impaired Transport.................187 5.3.3 Nanomechanical Dysfunction in Parkinson’s Disease: Microtubule Instability and Synucleinopathies.........191
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