MOLECULAR ASPECTS OF PAPOVA VIRUSES Yechiel Becker, Series Editor Julia Hadar, Managing Editor DEVELOPMENTS IN MOLECULAR VIROLOGY Becker, Y. (ed.) Herpesvirus DNA (1981) Becker, Y. (ed.) Replication of Viral and Cellular Genomes (1983) Becker, Y. (ed.) Antiviral Drugs and Interferon: the Molecular Basis of Their Activity (1983) Kohn, A. and Fuchs, P. (eds.) Mechanisms of Viral Pathogenesis from Gene to Pathogen (1983) Becker, Y. (ed.) Recombinant DNA Research and Viruses. Cloning and Expression of Viral Genes (1985) Feitelson, M. (author) Molecular Components of Hepatitis B Virus (1985) Becker, Y. (ed.) Viral messenger RNA: Transcription, Processing, Splicing and Molecular Structure (1985) Doerfler, W. (ed.) Adenovirus DNA: the Viral Genome and Its Expression (1986) DEVELOPMENTS IN VETERINARY VIROLOGY Payne, L.N. (ed.) Marek's Disease (1985) Burny, A. and Mammerickx, M. Enzootic Bovine Leukosis and Bovine Leukemia Virus (1987) Becker, Y. (ed.) African Swine Fever (1987) De Boer, a.F. (ed.) Avian Leukosis (1987) DEVELOPMENTS IN MEDICAL VIROLOGY Levine, P.H. (ed.) Epstein-Barr Virus and Associated Diseases (1985) Becker, Y. (ed.) Virus Infections and Diabetes Mellitus (1987) MOLECULAR ASPECTS OF P APOV AV IRUSES edited by Yosef Aloni The Weizmann Institute of Science Rehovot, Israel ~. " Martinus Nijhoff Publishing a member of the Kluwer Academic Publishers Group Boston/Dordrecht/Lancaster Distributors for the United States and Canada: Kluwer Academic Publishers 101 Philip Drive Assinippi Park Norwell, Massachusetts 02061, USA Distributors for the UK and Ireland: Kluwer Academic Publishers MTP Press Limited Falcon House, Queen Square Lancaster LAI IRN, UNITED KINGDOM Distributors for all other countries: Kluwer Academic Publishers Group Distribution Centre Post Office Box 322 3300 AH Dordrecht, THE NETHERLANDS Library of Congress Cataloging-in-Publication Data Molecular aspects of pap ova viruses . (Developments in molecular virology; 9) Bibliography: p. Includes index. l. Papovaviruses. 2. Molecular biology. I. Aloni, Yosef. II. Series. QR406.M65 1987 576'.6484 87-19103 ISBN-\3: 978-1-4612-9237-1 e-ISBN-\3: 978-1-46\3-2087-6 DOl: 10.1007/978-1-46\3-2087-6 The figure on the cover is from DePamphilis M.L. "Replication of Simian Virus 40 and Polyoma Virus Chromosomes". The figure appears on page 3 of this book. Copyright © 1988 by Martinus Nijhoff Publishing, Boston. Softcover reprint of the hardcover 1st edition 1988 All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, mechanical, photocopying, recording, or otherwise, without the prior written permission of the publishers, Martinus Nijhoff Publishing, 101 Philip Drive, Assinippi Park, Norwell, Massachusetts 02061. CONTENTS Contributors vii Preface xiii Replication of simian virus 40 and polyoma virus chromosomes M.L. DePamphilis 2 Polyomavirus sequences affecting the initiation of transcription and DNA replication W.R. Folk, W.J. Tang, M. Martin, J. Lednicky, S. Berger, and R.H. Adams 41 3 The SV 40 early promoter M. Zenke, A. Wildeman and P. Chambon 53 4 The polyoma enhancer J. Piette, M.-H. Kryszke and M. Yaniv 85 5 In vitro polyadenylation of SV40 early pre-mRNA L.C. Ryner, M. Chaudhuri and J.L. Manley 101 6 Regulation of viral transcription units by SV40 T-antigen J. Brady, M. Loeken, M.A. Thompson, J. Duvall and G. Khoury 119 7 Regulation of gene expression from the polyoma late promoter F.G. Kern, P. Delli-Bovi, S. Pellegrini and C. Basilico 137 8 Characterization of an immunologically distinct population of simian virus 40 large tumor antigen L. Covey, P. Kwok and C. Prives 163 9 The simian virus 40 agnoprotein S. Carswell and J.C. Alwine 185 10 SV40 chromatin structure W.A. Scott 199 vi 11 SV40 chromatin structure and virus assembly V. Blasquez, C. Ambrose, H. Lowman and M. Bina 219 12 The complex cellular networks in the control of SV40 gene expression A. Ben-Ze'ev 239 13 Molecular biology of papilloma virus H. Pfister, E. Kleiner, G. Lang, G. Sagner, W. Dietrich and P.G. Fuchs 269 Index 289 CONTRIBUTORS Raquel H. Adams Department of Microbiology The University of Tens at Austin Austin, Tens 78712 U.S.A. 1ames C. Alwine Department of Microbiology School of Medicine University of Penn~lvania Philadelphia, PA 19104 U.S.A. Christine Ambrose Department of Chemistry Purdue University West Lafayette, IN 47907 U.S.A. Claudio Basilico Department of Pathology New York University School of Medicine 550 First Avenue, Rm 551 New York, N.Y. 10016 U.S.A. Avri Ben-Ze'ev Department of Genetics Weizmann Institue of Science Rehovot 76100 Israel Shelley Berger Department of Microbiology The University of Tens at Austin Austin, Tens 78712 U.S.A. Minou Bina Department of Chemistry Purdue University West Lafayette, IN .. 7907 U.S.A. Veronica Blasquez Department of Chemistry Purdue University West Lafayette, IN 47907 U.S.A. John Brady Laboratory of Molecular Virology cancer National Institute National Institutes of Health Bethesda, Maryland 20892 U.S.A. viii Susan Carswell Department of Microbiology School of Medicine University of Pennsylvania Philadelphia, PA 191 04 U.S. A. Pierre Chambon Laboratoire de Genetique Moleculaire des Eucaryotes du CNRS Unite 184 de Biologie Moleculaire et de Genie Genetique de L'INSERM Faculte de Medecine 11, rue Humann 67086 Strasbourg-cedeI France Murari Chaudhuri Department of Biological Sciences Columbia University New York. N.Y. 10027 U.S. A. Lori Covey Department of Biological Sciences Columbia University New York. N.Y. 10027 U.S. A. Pasquale DeUi-Bovi Department of Pathology New York University School of Medicine SSO First Avenue. Rm ))4 New York, N.Y. 10016 U.S. A. Melvin L. DePamphilis Department of Cell Biology Roche Institute of Molecular Biology Nutley, N.J. 07110 U.S.A. Walter Dietrich Institut fOr Klinische Virologie Universitat Erlangen-NOrnberg 0-8520 Erlangen Federal Republic of Germany Janet Duvall Laboratory of Molecular Virology National Cancer Institute National Institutes of Health Bethesda, Maryland 20892 U.S. A. ix WiHiam R. Folk Department of Microbiology The University of Teus at Austin Austin, Tens 78712 U.S. A. Pawel G. Fuchs Institut for Klinische Virologie UniversiHtt Erlangen-Nornberg D-8520 Erlangen Federal Republic of Germany Francis G. Kern Breast Cancer Section/Medicine Branch National Cancer Institute National Institutes of Health Building 10, Rm 12N 266 Bethesda, Maryland 20982 U.S.A. George Khoury Laboratory of Molecular Virology National Cancer Institute National Institutes of Health Bethesda, Maryland 20892 U.S. A. Eva Kleiner Institut fOr Klinische Virologie Universitat Erlangen-Nornberg D-8520 Srlangen Federal Republic of Germany Marie-Helene Kryszke Department of Molecular Biology Pasteur Institute 25, rue du Dr. ROUI 75724 Paris, Cedel 15 France Perry Kwok Department of Biological Sciences Columbia University New York, N.Y. 10027 U.S.A. Gerlinde Lang Institut fOr Klinische Virologie Universitat Erlangen-Nornberg D-8520 Erlangen Federal Republic of Germany John Lednicky Department of Microbiology The University of Tens at Austin Austin, Texas 78712 U.S. A. x Mary Loeken Laboratory of Molecular Virology National Cancer Institute National Institutes of Health Bethesda, Maryland 20892 U.S.A. Henry Lowman Department of Chemistry Purdue University West Lafayette, IN 47907 U.S. A. James L. Manley Department of Biological Sciences Columbia University New York, N.Y. 10027 U.S. A. Mark Martin Department of Microbiology The University of Texas at Austin Austin, Tens 78712 U.S.A. Sandra Pellegrini I.C.R.F. Laboratories P.O. 801 123 Lincoln's Fields London, WC 2A 3PX England Jacques Piette Department of Molecular Biology Pasteur Institute 25, rue du Dr. ROUI 75724 Paris, Cedel 15 France Herbert Pfister Institut fOr Klinische und Molekulare Virologie Universitat Erlangen-Nornberg D-8520 Erlangen Federal Republic of Germany Carol Prives Department of Biological Sciences Columbia University New York, N.Y. 10027 U.S.A. Lisa C. Ryner Department of Biological Sciences Columbia University New York, N.Y. 10027 U.S.A.