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Molecular and Cell Biology For Dummies PDF

389 Pages·2009·7.76 MB·English
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Molecular & Cell Biology FOR DUMmIES ‰ by René Fester Kratz, PhD Molecular & Cell Biology For Dummies® Published by Wiley Publishing, Inc. 111 River St. Hoboken, NJ 07030-5774 www.wiley.com Copyright © 2009 by Wiley Publishing, Inc., Indianapolis, Indiana Published by Wiley Publishing, Inc., Indianapolis, Indiana Published simultaneously in Canada No part of this publication may be reproduced, stored in a retrieval system or transmitted in any form or by any means, electronic, mechanical, photocopying, recording, scanning or otherwise, except as permit- ted under Sections 107 or 108 of the 1976 United States Copyright Act, without either the prior written permission of the Publisher, or authorization through payment of the appropriate per-copy fee to the Copyright Clearance Center, 222 Rosewood Drive, Danvers, MA 01923, (978) 750-8400, fax (978) 646-8600. Requests to the Publisher for permission should be addressed to the Permissions Department, John Wiley & Sons, Inc., 111 River Street, Hoboken, NJ 07030, (201) 748-6011, fax (201) 748-6008, or online at http:// www.wiley.com/go/permissions. Trademarks: Wiley, the Wiley Publishing logo, For Dummies, the Dummies Man logo, A Reference for the Rest of Us!, The Dummies Way, Dummies Daily, The Fun and Easy Way, Dummies.com, Making Everything Easier, and related trade dress are trademarks or registered trademarks of John Wiley & Sons, Inc. and/ or its affi liates in the United States and other countries, and may not be used without written permission. All other trademarks are the property of their respective owners. Wiley Publishing, Inc., is not associated with any product or vendor mentioned in this book. LIMIT OF LIABILITY/DISCLAIMER OF WARRANTY: THE PUBLISHER AND THE AUTHOR MAKE NO REPRESENTATIONS OR WARRANTIES WITH RESPECT TO THE ACCURACY OR COMPLETENESS OF THE CONTENTS OF THIS WORK AND SPECIFICALLY DISCLAIM ALL WARRANTIES, INCLUDING WITH- OUT LIMITATION WARRANTIES OF FITNESS FOR A PARTICULAR PURPOSE. NO WARRANTY MAY BE CREATED OR EXTENDED BY SALES OR PROMOTIONAL MATERIALS. THE ADVICE AND STRATEGIES CONTAINED HEREIN MAY NOT BE SUITABLE FOR EVERY SITUATION. THIS WORK IS SOLD WITH THE UNDERSTANDING THAT THE PUBLISHER IS NOT ENGAGED IN RENDERING LEGAL, ACCOUNTING, OR OTHER PROFESSIONAL SERVICES. IF PROFESSIONAL ASSISTANCE IS REQUIRED, THE SERVICES OF A COMPETENT PROFESSIONAL PERSON SHOULD BE SOUGHT. NEITHER THE PUBLISHER NOR THE AUTHOR SHALL BE LIABLE FOR DAMAGES ARISING HEREFROM. THE FACT THAT AN ORGANIZATION OR WEBSITE IS REFERRED TO IN THIS WORK AS A CITATION AND/OR A POTENTIAL SOURCE OF FUR- THER INFORMATION DOES NOT MEAN THAT THE AUTHOR OR THE PUBLISHER ENDORSES THE INFOR- MATION THE ORGANIZATION OR WEBSITE MAY PROVIDE OR RECOMMENDATIONS IT MAY MAKE. FURTHER, READERS SHOULD BE AWARE THAT INTERNET WEBSITES LISTED IN THIS WORK MAY HAVE CHANGED OR DISAPPEARED BETWEEN WHEN THIS WORK WAS WRITTEN AND WHEN IT IS READ. For general information on our other products and services, please contact our Customer Care Department within the U.S. at 877-762-2974, outside the U.S. at 317-572-3993, or fax 317-572-4002. For technical support, please visit www.wiley.com/techsupport. Wiley also publishes its books in a variety of electronic formats. Some content that appears in print may not be available in electronic books. Library of Congress Control Number: 2009926359 ISBN: 978-0-470-43066-8 Manufactured in the United States of America 10 9 8 7 6 5 4 3 2 1 About the Author René Fester Kratz, PhD, grew up near the ocean in Rhode Island. From a young age, she wanted to be a teacher (because she loved her teachers at school) and a biologist (because her dad was one). She graduated from Warwick Veterans Memorial High School and then went on to major in biol- ogy at Boston University. As a freshman and sophomore at BU, René got excited by subjects other than biology and even considered changing her major. Then, she met and studied under Lynn Margulis, who reignited René’s love of biology and introduced her to the world of microbes. René graduated with a bachelor’s degree in Biology from BU and then went on to get a mas- ter’s and a doctorate degree in botany from the University of Washington. At UW, René studied reproductive onset in Acetabularia acetabulum, a marine green alga that grows as single cells big enough to pick up with your fi ngers. René currently teaches biology and general science classes at Everett Community College in Everett, Washington. René spends most of her time introducing students to the wonders of cells and microbes as she teaches cellular biology and microbiology. René also has a strong interest in sci- ence education and science literacy for everyone. As a member of the North Cascades and Olympic Science Partnership, she helped create inquiry- based science courses for future teachers that are based on research on human learning. René loves teaching these courses because they make science accessible for all kinds of people. In the summer, René enjoys work- ing with K–12 teachers on the improvement of science education in the public schools. René also enjoys writing about science and is the author of Microbiology The Easy Way for Barron’s Educational Press. René loves living in the Pacifi c Northwest because she is near the ocean and her daffodils start blooming in February (when her family back East is still shoveling snow). She doesn’t mind the rain and thinks the San Juan Islands are one of the most beautiful places on Earth. Her husband, two sons, and two very bad dogs help her remember what is truly important and her “sisters” help keep her sane. René loves to scrapbook, quilt, stitch, and read. Dedication To my husband, Dan, and my sons, Hueston and Dashiel. You are the center of my world. To my mom, Annette. It may be corny, but you are the “wind beneath my wings.” To my dad, James. I wanted to be a biologist because of you. To Lynn: Thank you for inspiring a lifelong love of learning and microbes. Author’s Acknowledgments Thanks to Matt Wagner of Fresh Books, Inc., for helping me fi nd the oppor- tunity to write this book. And thanks to all the great people at Wiley who made it happen: my editor, Kelly Ewing, who was always helpful and upbeat; the acquisitions editor, Stacy Kennedy, who helped get me started on the project; Alicia South, who coordinated the art; and Barry Ludvik, my techni- cal reviewer. Thanks also to Patrick Redmond, the project coordinator, and those who worked on the art: Kitty Auble, Kathryn Born, Ana Carillo, Rhonda David-Burroughs, Brooke Graczyk, Gary Hunt, Ashley Layfi eld, Shelley Lea, Beth Morgan, Andew Recher, Heidi Richter, Simon Shak, Melissa K. Smith, Alicia South, Ron Terry, Janet Wahlfeldt, and Tobin Wilkerson. On the home front, thanks to my husband, Dan, for all his love and support. To Hueston and Dashiel for once again being patient when Mommy was glued to her computer. To my sister, Alyson, and my friend, Julie, for reading chap- ters and sharing their nonscientist perspectives. To Staci, for helping me walk off some stress. And a big thanks always to my mother, Annette, for just being so supportive of everything I do. Thanks to all my students at Everett Community College for your enthusiasm and hard work. You have all inspired me to keep doing what I do. Thanks also to my dean, Al Friedman, for letting me teach a reduced load for one quarter so that I’d have more time to write. Publisher’s Acknowledgments We’re proud of this book; please send us your comments through our Dummies online registra- tion form located at http://dummies.custhelp.com. For other comments, please contact our Customer Care Department within the U.S. at 877-762-2974, outside the U.S. at 317-572-3993, or fax 317-572-4002. Some of the people who helped bring this book to market include the following: Acquisitions, Editorial, and Media Composition Services Development Project Coordinator: Patrick Redmond Project Editor: Kelly Ewing Layout and Graphics: Samantha Allen, Acquisitions Editor: Stacy Kennedy Reuben W. Davis, Andrea Hornberger, Melissa Jester, Christin Swinford Assistant Editor: Erin Calligan Mooney Special Art: Kitty Auble, Kathryn Born, Editorial Program Coordinator: Joe Niesen Ana Carillo, Rhonda David-Burroughs, General Reviewer: Barry Ludvik Brooke Graczyk, Gary Hunt, Senior Editorial Manager: Jennifer Ehrlich Ashley Layfi eld, Shelley Lea, Beth Morgan, Andrew Recher, Heidi Richter, Editorial Supervisor and Reprint Editor: Simon Shak, Melissa K. Smith, Ron Terry, Carmen Krikorian Janet Wahlfeldt, Tobin Wilkerson Editorial Assistant: Jennette ElNaggar Proofreader: Christine Sabooni Art Coordinator: Alicia B. South Indexer: Potomac Indexing, LLC Cover Photos: © Colin Anderson/Brand X/ Corbis Cartoons: Rich Tennant (www.the5thwave.com) Publishing and Editorial for Consumer Dummies Diane Graves Steele, Vice President and Publisher, Consumer Dummies Kristin Ferguson-Wagstaffe, Product Development Director, Consumer Dummies Ensley Eikenburg, Associate Publisher, Travel Kelly Regan, Editorial Director, Travel Publishing for Technology Dummies Andy Cummings, Vice President and Publisher, Dummies Technology/General User Composition Services Debbie Stailey, Director of Composition Services Contents at a Glance Introduction .................................................................... 1 Part I: The World of the Cell ............................................. 7 Chapter 1: Exploring the World of the Cell ...........................................................................9 Chapter 2: Take a Tour Inside the Cell ................................................................................15 Chapter 3: Dead or Alive: Viruses ........................................................................................37 Part II: Molecules: The Stuff of Life ................................ 51 Chapter 4: Better Living through Chemistry ......................................................................53 Chapter 5: Carbohydrates: How Sweet They Are ..............................................................77 Chapter 6: Proteins: Workers in the Cellular Factory .......................................................85 Chapter 7: DNA and RNA: Instructions for Life ................................................................101 Chapter 8: Lipids: Waterproof and Energy Rich ..............................................................111 Part III: The Working Cell ............................................ 119 Chapter 9: Hello, Neighbor: How Cells Communicate .....................................................121 Chapter 10: Metabolism: Transferring Energy and Matter .............................................135 Chapter 11: Cellular Respiration: Every Breath You Take ..............................................155 Chapter 12: Photosynthesis: Makin’ Food in the Kitchen of Life ...................................185 Chapter 13: Splitsville: The Cell Cycle and Cell Division ................................................201 Part IV: Genetics: From One Generation to the Next ....... 209 Chapter 14: Meiosis: Getting Ready for Baby ...................................................................211 Chapter 15: Mendelian Genetics: Talkin’ ’Bout the Generations ...................................223 Chapter 16: Expect the Unexpected: Non-Mendelian Patterns of Inheritance ............241 Part V: Molecular Genetics: Reading the Book of Life..... 255 Chapter 17: DNA Synthesis: Doubling Your Genetic Stuff ..............................................257 Chapter 18: Transcription and Translation: What’s in a Gene? .....................................267 Chapter 19: Control of Gene Expression: It’s How You Play Your Cards That Counts ....285 Part VI: Tools of Molecular Biology: Harnessing the Power of DNA ........................................................ 303 Chapter 20: Recombinant DNA Technology: Power Tools at the Cellular Level .........305 Chapter 21: Genomics: The Big Picture ............................................................................325 Part VII: The Part of Tens ............................................. 337 Chapter 22: Ten Important Rules for Cells to Live By .....................................................339 Chapter 23: Ten Ways to Improve Your Grade ................................................................349 Index .......................................................................... 355 Table of Contents Introduction ................................................................. 1 About This Book ..............................................................................................1 Conventions Used in This Book .....................................................................2 What You’re Not to Read ................................................................................2 Foolish Assumptions .......................................................................................3 How This Book Is Organized ..........................................................................3 Part I: The World of the Cell .................................................................4 Part II: Molecules: The Stuff of Life ......................................................4 Part III: The Working Cell ......................................................................4 Part IV: Genetics: From One Generation to the Next .........................4 Part V: Molecular Genetics: Reading the Book of Life .......................4 Part VI: Tools of Molecular Biology: Harnessing the Power of DNA ..................................................................................................5 Part VII: The Part of Tens ......................................................................5 Icons Used in This Book .................................................................................5 Where to Go from Here ...................................................................................6 Part I: The World of the Cell .......................................... 7 Chapter 1: Exploring the World of the Cell . . . . . . . . . . . . . . . . . . . . . . . .9 Cells and Viruses: Discovering the Inhabitants of the Microscopic World ......................................................................................9 You: On the cellular level ....................................................................10 Them: Bacteria and viruses ................................................................11 The Life of a Cell: How Cells Get What They Need to Survive and Reproduce ...........................................................................................12 Sexual Reproduction: Shuffl ing the Genetic Deck for the Next Generation .........................................................................................12 DNA to Protein: Following the Instructions in the Genetic Code ............13 DNA Technology: Tackling the World’s Problems ....................................13 Chapter 2: Take a Tour Inside the Cell. . . . . . . . . . . . . . . . . . . . . . . . . . .15 Admiring the Unity and Diversity of Cells ..................................................15 Finding Common Ground: Structures in All Cells ......................................16 Customs: Plasma membrane ..............................................................17 A happenin’ place: The cytoplasm ....................................................18 The library: DNA-containing region ...................................................19 Workbenches: Ribosomes ..................................................................19 Your Body, Your Cells: Eukaryotic Cells ....................................................20 Home offi ce: The nucleus....................................................................22 Post offi ce: The endomembrane system ...........................................24

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