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Mitochondrial Biology: New Perspectives: Novartis Foundation Symposium 287, Volume 287. Edited by Derek J. Chadwick and Jamie Goode Copyright  Novartis Foundation 2007. ISBN: 978-0-470-06657-7 MITOCHONDRIAL BIOLOGY: NEW PERSPECTIVES The Novartis Foundation is an international scientifi c and educational charity (UK Registered Charity No. 313574). Known until September 1997 as the Ciba Foundation, it was established in 1947 by the CIBA company of Basle, which merged with Sandoz in 1996, to form Novartis. The Foundation operates independently in London under English trust law. It was formally opened on 22 June 1949. The Foundation promotes the study and general knowledge of science and in particular encourages international co-operation in scientifi c research. To this end, it organizes internationally acclaimed meetings (typically eight symposia and allied open meetings and 15–20 discussion meetings each year) and publishes eight books per year featuring the presented papers and discussions from the symposia. Although primarily an operational rather than a grant-making foundation, it awards bursaries to young scientists to attend the symposia and afterwards work with one of the other participants. The Foundation’s headquarters at 41 Portland Place, London W1B 1BN, provide library facilities, open to graduates in science and allied disciplines. Media relations are fostered by regular press conferences and by articles prepared by the Foundation’s Science Writer in Residence. The Foundation offers accommodation and meeting facilities to visiting scientists and their societies. Information on all Foundation activities can be found at http://www.novartisfound.org.uk Novartis Foundation Symposium 287 MITOCHONDRIAL BIOLOGY: NEW PERSPECTIVES Copyright © Novartis Foundation 2007 Published in 2007 by John Wiley & Sons Ltd, The Atrium, Southern Gate, Chichester PO19 8SQ, UK National 01243 779777 International (+44) 1243 779777 e-mail (for orders and customer service enquiries): [email protected] Visit our Home Page on http://www.wileyeurope.com or http://www.wiley.com All Rights Reserved. No part of this book may be reproduced, stored in a retrieval system or transmitted in any form or by any means, electronic, mechanical, photocopying, recording, scanning or otherwise, except under the terms of the Copyright, Designs and Patents Act 1988 or under the terms of a licence issued by the Copyright Licensing Agency Ltd, 90 Tottenham Court Road, London W1T 4LP, UK, without the permission in writing of the Publisher. Requests to the Publisher should be addressed to the Permissions Department, John Wiley & Sons Ltd, The Atrium, Southern Gate, Chichester, West Sussex PO19 8SQ, England, or emailed to [email protected], or faxed to (+44) 1243 770620. This publication is designed to provide accurate and authoritative information in regard to the subject matter covered. It is sold on understanding that the Publisher is not engaged in rendering professional services. If professional advice or other expert assistance is required, the services of a competent professional should be sought. Other Wiley Editorial Offi ces John Wiley & Sons Inc., 111 River Street, Hoboken, NJ 07030, USA Jossey-Bass, 989 Market Street, San Francisco, CA 94103-1741, USA Wiley-VCH Verlag GmbH, Boschstr. 12, D-69469 Weinheim, Germany John Wiley & Sons Australia Ltd, 33 Park Road, Milton, Queensland 4064, Australia John Wiley & Sons (Asia) Pte Ltd, 2 Clementi Loop #02-01, Jin Xing Distripark, Singapore 129809 John Wiley & Sons Canada Ltd, 6045 Freemont Blvd, Mississauga, Ontario, Canada L5R 4J3 Wiley also publishes its books in a variety of electronic formats. Some content that appears in print may not be available in electronic books. Novartis Foundation Symposium 287 x + 244 pages, 32 fi gures, 2 tables Anniversary Logo Design: Richard J Pacifi co British Library Cataloguing in Publication Data A catalogue record for this book is available from the British Library ISBN 978-0-470-06657-7 Typeset in 10½ on 12½ pt Garamond by SNP Best-set Typesetter Ltd., Hong Kong Printed and bound in Great Britain by T. J. International Ltd, Padstow, Cornwall. This book is printed on acid-free paper responsibly manufactured from sustainable forestry, in which at least two trees are planted for each one used for paper production. Contents Symposium on New perspectives on mitochondrial biology, held at the Novartis Foundation, London, 28–30 November 2006 Editors: Derek J. Chadwick (Organizer) and Jamie Goode This symposium is based on a proposal by Michael Duchen David G. Nicholls Chair’s introduction 1 Albert Neutzner, Richard J. Youle and Mariusz Karbowski Outer mitochondrial membrane protein degradation by the proteasome 4 Discussion 14 Sarah E. Haigh, Gilad Twig, Anthony A. J. Molina, Jakob D. Wikstrom, Motti Deutsch and Orian S. Shirihai PA-GFP: a window into the subcellular adventures of the individual mitochondrion 21 Discussion 36 Luca Scorrano Multiple functions of mitochondria-shaping proteins 47 Discussion 55 Bruce M. Spiegelman Transcriptional control of mitochondrial energy metabolism through the PGC1 coactivators 60 Discussion 63 Charles Affourtit, Paul G. Crichton, Nadeene Parker and Martin D. Brand Novel uncoupling proteins 70 Discussion 80 Cecilia Giulivi Mitochondria as generators and targets of nitric oxide 92 Discussion 100 György Hajnóczky, Masao Saotome, György Csordás, David Weaver and Muqing Yi Calcium signalling and mitochondrial motility 105 Discussion 117 v vi CONTENTS Anna Romagnoli, Paola Aguiari, Diego De Stefani, Sara Leo, Saverio Marchi, Alessandro Rimessi, Erika Zecchini, Paolo Pinton and Rosario Rizzuto Endoplasmic reticulum/mitochondria calcium cross-talk 122 Discussion 131 Brian O’Rourke, Sonia Cortassa, Fadi Akar and Miguel Aon Mitochondrial ion channels in cardiac function and dysfunction 140 Discussion 152 Paolo Bernardi and Michael Forte The mitochondrial permeability transition pore 157 Discussion 164 Dominic James, Philippe A. Parone, Olivier Terradillos, Safa Lucken-Ardjomande, Sylvie Montessuit and Jean-Claude Martinou Mechanisms of mitochondrial outer membrane permeabilization 170 Discussion 176 M. Flint Beal Mitochondria and neurodegeneration 183 Discussion 192 Mügen Terzioglu and Nils-Göran Larsson Mitochondrial dysfunction in mammalian ageing 197 Discussion 208 Eric A. Schon and Salvatore DiMauro Mitochondrial mutations: genotype to phenotype 214 Discussion 226 Contributor Index 234 Subject index 236 Participants Vera Adam-Vizi Department of Medical Biochemistry, Semmelweis University, PO Box 262, H-1444 Budapest, Hungary M. Flint Beal Department of Neurology and Neuroscience, Weill Medical College of Cornell University, 525 East 68th Street, Room F610, New York, NY 10021, USA Piotr Bednarczyk (Novartis Foundation Bursar) Department of Biophysics, Agri- cultural University SGGW, 159 Nowousynowska St., 02-776 Warsaw, Poland Paolo Bernardi Department of Biomedical Sciences, Università di Padova, Viale Giuseppe Colombo 3, I-35121 Padova, Italy Martin D. Brand MRC Dunn Human Nutrition Unit, Hills Road, Cambridge CB2 2XY, UK Michael Duchen Department of Physiology, University College London, Gower Street, London, WC1E 6BT, UK Cecilia Giulivi Department of Molecular Biosciences, University of California, 1311 Haring Hall, One Shields Avenue, Davis, CA 95616, USA György Hajnóczky Department of Pathology, Anatomy and Cell Biology, Thomas Jefferson University, Rm 253 7AH, 1020 Locust Street, Philadelphia, PA 19107, USA Andrew P. Halestrap Department of Biochemistry, School of Medical Sciences, University of Bristol, Bristol BS8 1TD, UK Derek Hausenloy (Novartis Foundation Bursar) The Hatter Cardiovascular Insti- tute, University College Hospital, 67 Chenies Mews, London WC1E 6HX, UK Howard T. Jacobs Institute of Medical Technology, University of Tampere, FI 33014, Finland vii viii PARTICIPANTS Nils-Göran Larsson Karolinska Institutet, Department of Laboratory Medicine, Division of Metabolic Diseases, Novum, S-14186 Stockholm, Sweden John J. Lemasters Pharmaceutical Sciences and Biochemistry & Molecular Biology, Medical University of South Carolina, QF308 Quadrangle Building, 280 Calhoun Street, PO Box 250140, Charleston, SC 29425, USA Jean-Claude Martinou Department of Cell Biology, Sciences III, University of Geneva, 30 quai Ernest Ansermet, 1211 Geneva 4, Switzerland David G. Nicholls (Chair) Morphology Core, Buck Institute for Age Research, 8001 Redwood Blvd, Novato, CA 94945, USA Brian O’Rourke School of Medicine, Institute of Molecular Cardiobiology, The Johns Hopkins University, 720 Rutland Avenue, 1059 Ross Bldg., Baltimore, MD 21205-2195, USA Sten Orrenius Institute of Environmental Medicine, Division of Toxicology, Karolinska Institutet, Box 210, Stockholm, SE-171 77, Sweden Anant Parekh Department of Physiology, Anatomy and Genetics, University of Oxford, Parks Road, Oxford, OX1 3PY, UK Ian J. Reynolds Merck Research Laboratories, WP42-229, 770 Sumneytown Pike, P O Box 4, West Point, PA 19486-0004, USA Peter R. Rich The Glynn Laboratory of Bioenergetics, Department of Biology, University College London, Gower Street, London WC1E 6BT, UK Rosario Rizzuto Department of Experimental and Diagnostic Medicine, General Pathology Section, University of Ferrara, Via L. Borsari 46, 44100 Ferrara, Italy Eric A. Schon Department of Neurology, Room 4-431, College of Physicians and Surgeons, Columbia University, 630 West 168th Street, New York, NY 10032, USA Luca Scorrano Dulbecco-Telethon Institute, Venetian Institute of Molecular Medicine, Via Orus 2, Padova, I-35129, Italy PARTICIPANTS ix Orian Shirihai Department of Pharmacology and Experimental Therapeutics, Tufts University School of Medicine, 136 Harrison Avenue, Boston, MA 02111, USA Bruce M. Spiegelman Dana-Farber Cancer Institute and Department of Cell Biology, Harvard Medical School, Boston, MA 02115, USA Douglas M. Turnbull Mitochondrial Research Group, School of Neurology, Neurobiology and Psychiatry, The Medical School, Newcastle University, Newcastle Upon Tyne, NE2 4HH, UK Richard J. Youle Biochemistry Section, Surgical Neurology Branch, National Institutes of Health, Bldg 35, Room 2C917, 25 Convent Drive, MSC 370, Bethesda, MD 20892, USA Mitochondrial Biology: New Perspectives: Novartis Foundation Symposium 287, Volume 287. Edited by Derek J. Chadwick and Jamie Goode Copyright  Novartis Foundation 2007. ISBN: 978-0-470-06657-7 Chair’s introduction David G. Nicholls Buck Institute for Age Research, 8001 Redwood Blvd, Novato, CA 94945, USA In this introduction I want to summarize where we are in the fi eld and where we are going. What is the future of mitochondrial bioenergetics? A couple of weeks ago I had an idle moment, so I logged on to PubMed and entered the search term ‘mitochondria’ followed by the years 1950 and 2006, one after the other. The results were fascinating. The numbers of citations per year for mitochondria started off in the bioenergetic prehistory, going back almost 100 years to the fi rst descrip- tions of mitochondria. For me, the single event that introduced the classic era of mitochondrial bioenergetics was the publication of papers by Chance and Williams in the mid 1950s which fi rst described the oxygen electrode, and described the redox changes of the cytochromes. What happened then was an explosive growth over the next 10 or 15 years in the number of papers, which led to over 3000 papers per year by the time the next revolution came. This was Peter Mitchell’s work in the late 1960s. This is interesting: whereas you would expect that the discovery of a mechanism would stimulate a lot of new research, what happened after the three or four years when Peter was publishing these fantastic papers is that the fi eld stagnated for 20 years in terms of numbers of publications. Somehow, because bioenergetics had defi ned itself so narrowly in terms of understanding how the respiratory chain and ATP synthase works with a little bit of ion transport, this limited the fi eld. The next explosion of research came when our cell biology colleagues working on cell health and death discovered, sometimes to their discomfort, that mitochon- dria moved into the centre of the fi eld. In the last 10 years the trend has been almost explosive in terms of the number of papers on mitochondrial bioenergetics. I didn’t have time to do a statistical sampling of the different years, but my guess is that 80% of these papers come under the fi eld of mitochondrial physiology: mitochondria in the context of the cell. What is interesting is where we are going. To quote Donald Rumsfeld, it is the unknown unknowns that will defi ne where the fi eld moves in the next 10 years. In 1994, no one knew that they didn’t know how cytochrome c was released, because it wasn’t part of the vocabulary. What does this have to do with cell death? It is the things that we don’t know that we don’t know which are going to defi ne the next 10 years or so. 1

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