A flexible approach to the modern microbiology lab EXPERIMENT Propagation of Isolated 39 Bacteriophage Cultures NEW! “Propagation LEARNING OBJECTIVES CLINICAL APPLICATION Once you have completed this experiment, With the increase in the rates of antibiotic resis- of Isolated Bacteriophage you should be able to tance in clinically relevant bacteria, pharmaceutical Genus CIudlteunrets”i fiexcpaertimioennt of Unk1. nIcmsuoalltnauitrpoeeu bfloaatrci otwleanrtseio.rp gheanngeetsic f rso tumd iae sp loarq ue ctnbhooaemwcrtEap elpoareiona3ukiXle itinisncg fa e tanrcPetdt ati orhtemnesE ewpenoaittsrhscsR ihianbe ivulriistrn1Iyu la isokrM.eef Cl tylruoe proarlkeatEiincnntegg rs fea.oN sTrree hnaseeriyscw Tthaa r net has been added to the 2. Eisnoulamteedra ftreo mth ea np lianqduivei-dfouraml pinlagq uunei.ts iass e ax ammeianninsg o tfh tere caltininicga bl aucsteesr ioafl ibnafecctetiroionpsh iang tehse EXPERIMENT Bacterial Cultures absence of antibiotics. 46 Eleventh Edition. This Microbial Fermentation experiment (39) guides Principle This exercise will demonstrate the procedure for AT THE BENCH students to isolate isspoelcaiteins gf raonmd ap rsoinpgalgea ptilnagq uae s ppeicckifiecd bfraocmte rai olapwhang e bacteriophages for pbgeleangtieent.i sBct eurefdocyroienm agb main niacetriwoob nbi oastcluotedgriisieots p oahrn av giinreod oliovr igbdiesutga imln s atyra in MCualtuterersials PART A Alcohol Fermentation gttihroaanpt sea asre rae rr eeins acpcroiednasss ieabdnle di n fmo trhi ntehe firean clishs hawrehadoc ptserero icdsotuinccct te aannsttdrea s- LOEncAe RyoNu IhNagicmvuGeernp rceOoeotmnrBitctpa J lcnmeElttie aCntdnei TctcihapIhiVslun relEieaxqpstuieeoerain mri,nc eah nnt , auornbemdctcfbciktnhoileoaeouf elalcnleslns tontsbce;Wtee .wio t aa rsbbWehc noie eseduotadii fe mtfntico h uewsr wegberio awaletlehlelhd c sag epip tehlntcinhrleen eo e r eoerdsselsff vto .tpolea hueecTnohnrstendaymh atrasty hu.iguwmlei siTsnena liioiusghgilllnsoll fs e wy gsta vstbps l siisieubeehrmwsl pu l eaavg striss gylaiercepearaesmnhaiusrr eedoop e.snetbt n saao tiispecdnr o bwgtnr l f iavaan.e chesniccec laaoedttitTt iegti s d ctn mrh mhhfiefigfbraahesf uoooalu tte ws ma rssasteibpiri lni obl lnoael gne e gn-lb i lto cteeox h bpesAE2MP btbe r4uregxeyio-rfapephrf tdredoethrd orprieu itenivlesmrmuaade intgbe eanssunensaotast erlfrt ,ttii3 teene0 8isadinne. 9egot tfisr( h ambvtTtaruern,Btcla odd 2hpSte hfasema)lnr;v ro ct l et ttmurgpp uaiylrinet bpoEurdoerntu rxiot.evpupon in:dobed e1rfeu c i0aE; ma galmosr eaenpcnrlhdle aftodpe sqnrfl s uai3iTntLucOyte71Reheuos .hEnos i IutarWaa rcSrAanl c eye snecditt phnoRdiy vtla ose osoiiN utunBpi lee Ir.dhs oN a udovnGufe dcy cteeiOoroasmnsBtta pb JnclyeedE lttlehsCde. T tfheIirVsm eEexnpteartiimvee nt, actWgaommonrrnruuu ha ddappssis ltrTt behlteee oxh.toes sowwP.aedus c o e qricgentedutorixaetn eamatts gtporirsssam de ip eucops retxtm frohmir poodcce rdmuniie eafgus sfseolrtecs sot fp.reba wtertFdbehhon ti ieefdfrhstre s iuu jworrtoulc ,mmfic fiittn cotihae oeeetlcneho ,nsie te.wrsg e to Friidjahcfnauod i pwtwiacrdoce chiiree sntite dhdi hoedas e ft trb ic ow heswaja u e citaclhniihlt rrceileeeu toedsr,e s .nki t hahgi,ne e ds you should abse aab lpeo tossible way to arenane iigstmhhbso feroinr gpb rcoepallusl.ss Sioiinnsc, es utohceh f vai sr tuas hfleasig hesallva e io ndro fi mmee-nch-tifiEcquaiptmioennt. HoweverP, ryinocuip le mgroalpdess, iann dth we ivlidn yeeyaasrdt .t hAa wt ainree -epnrdoodguecninogu ss ttroa in of treat antibiotic-resistant shobthreiua seo, lftthd aeg p aanrr mtioceldetisu emmu tsott shrperlaye aodtn f droyifmfuo scieoulnl ttorh rc oebullg. hi ocBcheunnetsreimfnu gbeu irtuncberea,s w, 1la-t merrlb seattehsr,i ltueh peirlpmteotstme se,mtWt sehtriee,n r1jeuia. l5iiesc- m ygeals lap o srsfo gdruacpte osf a tnhde ontahtuerr aflr ufeitrsm, iennctlautdioinng o f yise uasste,d S taoc cinhoacruomlatyec eths ec emruevsit,s iwahei vcahr i. s e ltlhiepnso ideus, 1. Use previously studied staining, cultural noTtthhe i sbp ehxeaegr ec ipisader twiecilleln su sfrteo timhca at nao cisclou lratrteeondc p el tatoqh ureeo.mosvee shPdeaovsitcweeu,r t epnsipt et utitbeens ,r arcu kbT,b aeanrd b bgullabls,es mw ea3creh am1napyicre.ekaaa1ilscn pthg ;ic eppe seel,tnl ptsci.en iTlag.rh si,s pbliuomchs,e amnidca alp cpolnevs,e brsyi othne o af cjutiiocne of iant c2u1b°aCt etod 3fo2r° C3. tToh 5i sd iasy fso ullnodweerd a beryo abnic a cnoanedroitbioicn s characterbisaticcst,e arniadl b iinocfheecmtiiocanls p.roce- they may vary because of variations in batdoce gwtriaendeer o tchiceau frrsul iw t hsuegna trhse, fyreuacstto csee lalsn edn gzlyumcoastiec, afillrys t i1nyceuabra ttoio 5n ypeearrios din. Tahgein wg itnaen kiss tohre wn oaogedde nfo bra rrels. to acetaldehyde and then to alcohol, as illustrated During this time, the wine is clarified of any dures for independent genus identification strains (subgroups of a species). Thereforein ,F iGgiurtarep e4s6 c.1o.ntaining 20% to 30% sugar concen- truersbpiodnitsyi,b tlhe efroerb cyh parroacdtuecriinstgi cv ofllaavtoilres e. sTtheers c tlhaaritfi aerde of an unknown bacterial culture. becomes imperative to recall the specific bitorofa aticpopnhr owxeililm ymaieteldly- w 1i0n%e sto w 1i5th% a. nA lasloc ophreosl ecnotn itne nt p30romduincut tiess t, haennd fiblotetrtleedd,. pasteurized at 60°C for ical tests that differentiate among the different REVISED EXPERIMENTS include options for genera of the test organisms. CH2OH aalntedr ancactee smsiebdleia t,o m aallk sinizge st hoef leaxbpm peorrrioIemd geexernattneimfintscsasi vat.ei foE fpnoxr oorpfdc eeaadrnbiu murlneeke tnono tdw ifnfe cruelnttuiraete u bsianHOcHgtO eHa- OH OHH Genlyzcyomlyetisc 2CH3 CO COOH Decarboxylation Ac2eCtaHl3dCeHhOyde+ CCaOrb2on Principle rial species is presented in Experiment 68. TheH OH 4H+ reduction dioxide 46 now includes both wine and lactic acid fermentation, Identification of unknown bacterial cultures is one rationale for the performance of this exercise 2CH3 CH2 OH looking at the production of winlaet earn ind t hyeo sgeumrets.ter is twofold. First, you will Glucose Pyruvic acid Ethyl alcohol of themajor responsibilities of the microbiologist. Figure 46.1 Biochemical pathway for alcohol production have acquired expanded knowledge of microbial Samples of blood, tissue, food, water, and cosmet- activities and will be more proficient in labora- ics are examined daily in laboratories throughout tory skills. Second, and more important, you will the world for the presence of contaminants. In addi- be more cognizant of and more critical in your tion, industrial organizations are constantly screen- NEW! BioSafety Levels (BSLs) alert students to approach to species identification using dichoto- ing materials to isolate new antibiotic-producing organisms or organisAmT TsH tEh aBtE NwCiHll increase the yield moTheurmosm etkereys supplemeantpedp rwoitph rBiaertgee ys’sa Mfeatnyu atel.chniques. The organisms within of marketable produMcattse,r isaulsch as vitamins, solvents, this manual are mostly BSL-1 organisms, with any and enzymes. Once Ciusltourleasted, these unknown organ- CBeakLer wIith NwaterICAL APPBLSILC-A2 ToIrOgaNn isms now marked within the text. The 48- to 72-hour nutrient broth cultures (50 ml isms must be identipafieurre e2u5ds0 -m BaSl LEn -r2le dannmd ec Byealrca ifllalsuskss )c oeirffi eSutesa;p 7dh2y- .ltooc o9c6c-huos ur 1o0f -nmult rtieesntt tburboeth Eleventh Edition also reflects the most up to date The science of cSEarlbleaonumsraesuydeir bfi flraocsthka )c outfl tiAuorsepsen r(g5 i0il lmussl pnceirga e2r5l 0al-nmedl d taxonomy AWirpe gapuzelication of Leasrnaefde Atys spayrso ttoo cIdoelnst iffyr om governing bodies such as the and deals with the sSeacpchaarormaycteis ocernev isoiafe. living organisms anUnknown Bacterial Pathogen into interrelated groMPuere pddeissaig.n aBtede strudgenet gyro’usp (pMairsa orn gruoupas olf has been TBuhnseen b urrnoerle of the clinicaEl PlaAbo,r aAtoSryM in, a a hnosdp itAalO isA toC , better preparing students for the official, internatfaiogouarr)n p: lfiaavteel sn,l uaytnrdi e aonnt cea g1ca0r- mepllap ttuebts,e efi ovfde n Su atrbrioeeunrft abeurdor the.nce for quickly and efficientlyp irdoenfteifys sthieo cnaausla ltaivbe awgeontr k. bacterial classificatiEoqnuip smienncte 1923. The current edi- of a patient’s infection. This will entail choosing the tion, Bergey’s ManuM aicrlo inocifne rSatoyr osr tBeunmsen baurtnierc, 8 0B0-mal cterioFigluoreg 40y.2, W aterbath for mocisto herart eexpcertim aenstsays and performing them in the correct arranges related bacwtuitbthee sh,r egaliata-srsew siiasnrtea ntmt oaprak di3,n tgh3 pere mngcoimrl, eaotnedur ,i nsptoecrsuillea ttciensgat lle6d. Slowly heat the water to 4o0°Cr;d cheecrk ttheo th elro-gically identify the genus and species loop. mometer frequently to ensure that it does not sections rather than into the classical taxonomecixucclteu erdes t hoef tdhees ierxepde treimmpenertoaalt uforregt.a hPnliaescme s at hinegt ofo etuhren t. groupings of phylumP,r occleadsusr, eo rLdabe rO, naend family. Tbheakeer and maintain the temperature at 40°C for 10 minutes. Remove the cultures and asep- iisn tbearsreelda toionn cshhairpa ocft e1t.r hiLae2enx5sa°bdpCt e eSo lri( aitcmcbhoroeens ugnctrrto aaoavsull e)hd,nru e s4aa 0goict°a fsCt reeh ,pmam 6lca0p ht°ea eCorssa,fs, t 8tiuhn0i re°dmneC isnc, u taaoettonri nbideager n1 tut0pch s0aee°gh hdCa:r. osleoc7g.t yitaRroi,etcaep ai nseslleaey tc t ihtSnietooe ncwp uo a6lnta ef ttorehbr ee ata thtchweh toi eno mporglcpaautenelraisast tmliuaob rnTieen o l teifot dst 6 hI 4a0e0p° °tpPCCwr oa.onp driS - FOR SUCCESS NEW! Tips for Success spthayinsiionlgo rgeya, ccteilolunlsa, rn 2cu. hS gOStlc.nar eoas triushmewtre et aihunreousei t usmrBnnieSadtnLre,rkt -r 2 iasnycig daga,n erup d oepa nftll ahcatnteilell u osipnd,t lhltaraoetb e rateb swB lw lo.o i cinstoecheer cesacthue iocshtn.a iOso.nner A a.m citce8.ar lipRrpe sllaaaptittseteeeeassi t t cllshSaaetbbtse eewp ll,e ea6 ddt ef 68orb00r °°atCCthh..e tienmocpuelraattiuorne Go tfo t r8h0ae° tCmw aon ds tain your unknown culture first and then aepxppeerairm thenrotsu gahnodu dtr tahwe rkensouwAltstle tfdhogirse s ppooef icsnitfita cyin om3iu.n e nUabetghhgayitsegac i ma enrhpamr g aal tba ankeavtnsdisendtoee . eSg opt ahrtatlbi ge cishao ds ictnuneeircgoecsa olmheuennvd-d dliii nnq naSe suegi.te adcsll,,roe r ioropn eeiplopsvasp pciitsneueroicosleaa tocleitaulve.dbela date hst lieteeuosc dnint u iu2ocoo5tfnr° tfin Ceosfin f t. tcei91ec.0 .nh RrpIiannenlat-avpcditeu se erteabsht tae te lhtSda eSet b pe atewphobl eesao6id tut nef ir1uoorab0trnur 0a tifd°theohC near . t tgi2 enaa4mogr tacpporule al4prata8letat i hutoceornu euc ldtto trutuiefsol ref tt aeu1hysts0re t e30f itets7o°nw C°riaCn ro 4ga amntnnod y dino teuh rew b chaiictcrthae ttreeia st.et Fsso tw rw oeouxuladlmd b pbele eu ,os tfeh nfeuo lo uixnsi deida iesnne - amttiestnatkioens taon dco smtummobnli ng niques, microbial n4u. tUtersri,i nttgra iano ssfteenrr i1l,e0 pmbipl eoitfto ee aaccnhdh cmueeltcumhraen tioic afcol uparip let -activ5i tdaiyes ast 2,5 °C in a moist chambeird. entifying a Gram positive cocci bacteria. blocks in the lab. Each and characteristics osoftre gramilnei stmeisc ta ntrudb otehseo l atebrmelgpeedar watniuthrei t hs(4e0m n°Cam, s6e0 o°Ctf ,to he beP raobcleed ure Lab TwoSince many of the tests utilize agars that are tip explains why specific 80°C, and 100°C). 1. Observe all plates for the amount of growth of to work independen5. tSleyt u pi t4nh0e.2 w,a ianttseertrbteainthmg aths epi ltluhtsetrirmantoemgd ein te tr oin ani den2.t itRfheeyc toe rsdt yoorguar nriessmuslt sa ti ne athche cohf athrte p streoimvmpideeridal tiaunr ers .in appearance, be sure to label all tubes techniques are necessary the genus of an unknuoncwappned tucbeu ofl ntuutrirenet b.r oCth.haracteristhtei Lcabs R eport. and plates to ensure that results are collected to yield accurate results of the major organisms that have been used in for the correct test. experiments thus far are given in Table 31.1. You and helps guide students on how to perform crucial procedural steps correctly. Pearson Mastering Microbiology prepares students for the modern microbiology lab The items mentioned here are available in the Study Area of various Pearson Mastering Microbiology courses. Pre-Lab Quizzes can be assigned for each of the 76 experiments in Microbiology: A Laboratory Manual, Eleventh Edition. Each quiz consists of 10 multiple-choice questions with personalized wrong answer feedback. MicroLab Tutors help instructors and students get the most out of lab time and make the connection between microbiology concepts, lab techniques, and real-world applications. These tutorials combine live-action video and molecular animation paired with assessment and answer-specific feedback to help students to interpret and analyze lab results. MicroLab Tutor Coaching Activities include the following topics: ▶ Use and Application of the Acid-Fast Stain ▶ Multitest Systems— API 20E ▶ Aseptic Transfer of Bacteria ▶ ELISA ▶ Gram Stain ▶ Use and Application of Microscopy ▶ Polymerase Chain Reaction (PCR) ▶ Safety in the Microbiology Laboratory ▶ Quantifying Bacteria with Serial Dilutions and Pour Plates ▶ Smear Preparation and Fixation ▶ Streak Plate Technique ▶ Survey of Protozoa ▶ Identification of Unknown Bacteria Lab Technique Videos give students an opportunity to see techniques performed correctly and quiz themselves on lab procedures both before and after lab time. Lab Technique videos can be assigned as pre-lab quizzes in MasteringMicrobiology and include coaching and feedback. Lab Technique Videos include: ▶ NEW! The Scientific Method ▶ NEW! How to Write a Lab Report ▶ Acid-fast Staining ▶ Amylase Production ▶ Carbohydrate Catabolism ▶ Compound Microscope ▶ Differential and Selective Media ▶ Disk-diffusion Assay ▶ ELISA ▶ Gram Stain ▶ Hydrogen Sulfide Production ▶ Litmus Milk Reactions ▶ Negative Staining ▶ Respiration ▶ Serial Dilutions ▶ Simple Staining ▶ Smear Preparation ▶ Structural Stains ▶ Safety in the Microbiology Laboratory MicroLab Practical Activities assess students’ observation skills and give them extra practice to analyze important lab tests, procedures, and results. Instructors: Tailor this lab manual to perfectly fit your course! EXPERIMENT 8 Name: Date: Section: Lab Report Observations and Results NEW! Easy-to-adapt Lab Reports include blank 1. Draw representative fields of your microscopic observations. spaces for individual course customization. Instructors can select their preferred organisms. M. luteus 2. Describe the microscopic appearance of the different bacteria using the chart below. Organism M. luteus Shape EXP8ERIMENT Negative StainAirnranggement Magnification NEW! Revised Experiments include options for alternate media, reduced volumes, and fewer bacteria, making the LEARNING OBJECTIVES CLINICAL APPLICATION Once you have completed this experiment, Detecting Encapsulated Invaders experiments affordable and accessible to you should be able to The principle application of negative staining is to 1. Perform a negative staining procedure. determine if an organism possesses a capsule (a any-sized lab program. 2. Uvinsudaelrisztinangd u tnhseta bineende fimt iocbrotaoirngeadn firsomms . gitsoem lda emtimnoooreun ssv tiorrauutlteee nrs tlp)a,o yareeltr h ftoohruamgt ham tiiato kcnea. snT t haheles t ome cbichern ouiqosuergeda ins - frequently used in the identification of fungi such as Cryptococcus neoformans, an important infectious Principle agent found in bird dropping that is linked to menin- Negative staining requires the use of an acidic geal and lung infections in humans. stain such as India ink or nigrosin. The acidic stain, with its negatively charged chromogen, will not pen- etrate the cells because of the negative charge on the surface of bacteria. Therefore, the unstained cells are AT THE BENCH easily discernible against the colored background. The practical application of negative staining iasn tdw tohfeo clde.l lFsi rasrte, nsiontc seu hbejeact tfiexda ttoio tnh eis d nisotto rretqinugir ed Materials effects of chemicals and heat, their natural size and shape can be seen. Second, it is possible to observe Cultures REVISED! Instructor’s Guide for brsaitralaelcai ntn.e ioBrntiega kc ptiahlruloaestcde ea ahsrnseed, a dk tsi effilfiiexdcpaeu tislin tos tmnho oii snsu tdlnad oit nhbt, ae ds tohu tnachehne ddaolusre grdsiao nwnmgii stetmhh se sp i- TMawlitecerrnnotcayo-tfceoc buuars–c lthueortueiaur lsa ,cg uBalrat uscliralelnust.s c cuelrtueuress, aonf d other care. Figure 8.1 shows a negative stain of bacilli. Reagent Microbiology: A Laboratory Manual Nigrosin. by James G. Cappuccino, Equipment Microincinerator or Bunsen burner, inoculating Chad T. Welsh lmoiocpr,o sstcaoinpien.g tray, glass slides, lens paper, and © 2018 | 1-292-17581-8 • Procedure Steps 1–4 are illustrated in Figure 8.2. 978-1-292-17581-2 1. Place a small drop of nigrosin close to one end of a clean slide. Updated to reflect changes in the 2. Using aseptic technique, place a loopful of inoculum from the M. luteus culture in the Figure 8.1 Negative staining: Bacilli (1000×) drop of nigrosin and mix. lab manual, this guide is a valuable teaching aid for instructors and provides: ▶ NEW! Recommended readings for each experiment ▶ Detailed lists of required materials ▶ Tables for calculating the amount of media and equipment needed for your class ▶ Procedural points to emphasize ▶ Suggestions for optional procedural additions or modifications ▶ Helpful tips for preparing or implementing each experiment ▶ Answers to the Review Questions in the lab manual ▶ Information on laboratory safety protocol for instructional and technical staff M i c r o b i o l o g y A L A b o r A T o r y M A n u A L eleventh edition Global edition James G. Cappuccino SUNY Rockland Community College Chad Welsh Lindenwood University Harlow, England • London • New York • Boston • San Francisco • Toronto • Sydney • Dubai • Singapore • Hong Kong Tokyo • Seoul • Taipei • New Delhi • Cape Town • Sao Paulo • Mexico City • Madrid • Amsterdam • Munich • Paris • Milan Acquisitions Editor: Kelsey Churchman Acquisitions Editor, Global Edition: Sourabh Project Manager: Arielle Grant Maheshwari Program Manager: Chriscelle Palaganas Assistant Project Editor, Global Edition: Shaoni Development Editor: Laura Cheu Mukherjee Editorial Assistant: Ashley Williams Manager, Media Production, Global Edition: Vikram Program Management Team Lead: Mike Early Kumar Project Management Team Lead: Nancy Tabor Senior Manufacturing Controller, Production, Production Management, Interior Design, and Global Edition: Kay Holman Composition: Integra Software Services Pvt Ltd. Design Manager: Marilyn Perry Cover Designer: Lumina Datamatics Rights & Permissions Project Manager: Donna Kalal Photo Researcher: Kristin Piljay Manufacturing Buyer: Stacey Weinberger Executive Marketing Manager: Lauren Harp Cover Photo Credit: Tonhom1009/ Shutterstock Acknowledgements of third party content appear on page 547, which constitutes an extension of this copyright page. Pearson Education Limited Edinburgh Gate Harlow Essex CM20 2JE England and Associated Companies throughout the world Visit us on the World Wide Web at: www.pearsonglobaleditions.com © Pearson Education Limited 2018 The rights of James G. Cappuccino and Chad Welsh to be identified as the authors of this work have been asserted by them in accordance with the Copyright, Designs and Patents Act 1988. Authorized adaptation from the United States edition, entitled Microbiology: A Laboratory Manual, 11th edition, ISBN 978-0-134-09863-0, by James Cappuccino and Chad Welsh, published by Pearson Education © 2017. All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, electronic, mechanical, photocopying, recording or otherwise, without either the prior written permission of the publisher or a license permitting restricted copying in the United Kingdom issued by the Copyright Licensing Agency Ltd, Saffron House, 6–10 Kirby Street, London EC 1N 8TS. All trademarks used herein are the property of their respective owners. The use of any trademark in this text does not vest in the author or publisher any trademark ownership rights in such trademarks, nor does the use of such trademarks imply any affiliation with or endorsement of this book by such owners. Unless otherwise indicated herein, any third-party trademarks that may appear in this work are the property of their respective owners and any references to third-party trademarks, logos or other trade dress are for demonstrative or descriptive purposes only. Such references are not intended to imply any sponsorship, endorsement, authorization, or promotion of Pearson’s products by the owners of such marks, or any relationship between the owner and Pearson Education, Inc. or its affiliates, authors, licensees or distributors. ISBN 10: 1-292-17578-8 ISBN 13: 978-1-292-17578-2 British Library Cataloguing-in-Publication Data A catalogue record for this book is available from the British Library 10 9 8 7 6 5 4 3 2 1 Typeset by Integra Software Services Pvt. Ltd. Printed and bound by Vivar in Malaysia Contents Preface 10 Part B: Capsule Stain (Anthony Laboratory Safety 13 Method) 99 Laboratory Protocol 15 PART 4 Cultivation of Microorganisms: PART 1 Basic Laboratory Techniques Nutritional and Physical for Isolation, Cultivation, and Requirements, and Cultural Characterization Enumeration of Microbial of Microorganisms 17 Populations 107 Introduction 17 Introduction 107 Experiment 1: Culture Transfer Experiment 12: Nutritional Techniques 23 Requirements: Media for the Routine Experiment 2: Techniques for Cultivation of Bacteria 109 Isolation of Pure Cultures 31 Experiment 13: Use of Differential, Part A: Isolation of Discrete Colonies Selective, and Enriched Media 115 from a Mixed Culture 31 Experiment 14: Physical Factors: Part B: Isolation of Pure Cultures Temperature 125 from a Spread-Plate or Streak-Plate Experiment 15: Physical Factors: pH Preparation 34 of the Extracellular Environment 131 Experiment 3: Cultural Experiment 16: Physical Characteristics of Microorganisms 41 Factors: Atmospheric Oxygen Requirements 135 Experiment 17: Techniques for PART 2 Microscopy 47 the Cultivation of Anaerobic Microorganisms 141 Introduction 47 Experiment 4: Microscopic Experiment 18: Serial Dilution–Agar Plate Procedure to Quantitate Viable Examination of Stained Cell Cells 147 Preparations 49 Experiment 5: Microscopic Experiment 19: The Bacterial Growth Curve 155 Examination of Living Microorganisms Using a Hanging-Drop Preparation or a Wet Mount 57 PART 5 Biochemical Activities of Microorganisms 163 PART 3 Bacterial Staining 63 Introduction 163 Introduction 63 Experiment 20: Extracellular Experiment 6: Preparation Enzymatic Activities of of Bacterial Smears 67 Microorganisms 165 Experiment 7: Simple Staining 73 Experiment 21: Carbohydrate Experiment 8: Negative Staining 79 Fermentation 171 Experiment 9: Gram Stain 83 Experiment 22: Triple Sugar–Iron Agar Test 177 Experiment 10: Acid-Fast Stain 91 Experiment 23: IMViC Test 183 Experiment 11: Differential Staining for Visualization of Bacterial Cell Part A: Indole Production Test 184 Structures 97 Part B: Methyl Red Test 185 Part A: Spore Stain Part C: Voges-Proskauer Test 186 (Schaeffer-Fulton Method) 97 Part D: Citrate Utilization Test 187 7 Experiment 24: Hydrogen Sulfide Experiment 41: Physical Agents Test 195 of Control: Electromagnetic Experiment 25: Urease Test 199 Radiations 301 Experiment 26: Litmus–Milk Experiment 42: Chemical Agents Reactions 203 of Control: Chemotherapeutic Agents 305 Experiment 27: Nitrate Reduction Test 209 Part A: The Kirby-Bauer Antibiotic Sensitivity Test Procedure 306 Experiment 28: Catalase Test 213 Part B: Synergistic Effect of Experiment 29: Oxidase Test 217 Drug Combinations 308 Experiment 30: Utilization of Amino Experiment 43: Determination Acids 221 of Penicillin Activity in the Presence Part A: Decarboxylase Test 221 and Absence of Penicillinase 315 Part B: Phenylalanine Deaminase Part A: MIC Determination Using Test 223 a Spectrophotometer 316 Experiment 31: Genus Identification Part B: MIC Determination Using of Unknown Bacterial Cultures 227 a Plate Reader 317 Experiment 44: Chemical Agents PART 6 The Protozoa 233 of Control: Disinfectants and Antiseptics 321 Introduction 233 Part A: Disc Diffusion Testing Experiment 32: Free-Living of Disinfectants and Protozoa 235 Antiseptics 324 Experiment 33: Parasitic Part B: Modified Use Dilution Protozoa 241 Testing of Disinfectants and Antiseptics 325 PART 7 The Fungi 249 Introduction 249 PART 10 Microbiology of Food 331 Experiment 34: Cultivation and Morphology of Molds 251 Introduction 331 Part A: Slide Culture Technique 251 Experiment 45: Microbiological Part B: Mold Cultivation on Solid Analysis of Food Products: Bacterial Surfaces 253 Count 333 Experiment 35: Yeast Experiment 46: Microbial Morphology, Cultural Characteristics, Fermentation 337 and Reproduction 259 Part A: Alcohol Experiment 36: Identification Fermentation 337 of Unknown Fungi 267 Part B: Lactic Acid Fermentation 339 PART 8 The Viruses 273 PART 11 Microbiology of Water 343 Introduction 273 Experiment 37: Cultivation and Introduction 343 Enumeration of Bacteriophages 277 Experiment 47: Standard Qualitative Experiment 38: Isolation Analysis of Water 345 of Coliphages from Raw Sewage 283 Experiment 48: Quantitative Experiment 39: Propagation of Analysis of Water: Membrane Isolated Bacteriophage Cultures 289 Filter Method 353 PART 9 Physical and Chemical Agents PART 12 Microbiology of Soil 359 for the Control of Microbial Introduction 359 Growth 293 Experiment 49: Microbial Populations Introduction 293 in Soil: Enumeration 361 Experiment 40: Physical Agents Experiment 50: Isolation of of Control: Moist Heat 295 Antibiotic-Producing Microorganisms 8 Contents and Determination of Antimicrobial Experiment 63: Identification Spectrum of Isolates 367 of Streptococcus pneumoniae 467 Part A: Isolation of Experiment 64: Identification Antibiotic-Producing of Enteric Microorganisms Using Microorganisms 368 Computer-Assisted Multitest Part B: Determination Microsystems 473 of Antimicrobial Spectrum Experiment 65: Isolation and of Isolates 369 Presumptive Identification of Experiment 51: Isolation Campylobacter 483 of Pseudomonas Species by Means of Experiment 66: Microbiological the Enrichment Culture Technique 373 Analysis of Urine Specimens 487 Experiment 67: Microbiological Analysis of Blood Specimens 493 PART 13 Bacterial Genetics 379 Experiment 68: Species Identification Introduction 379 of Unknown Bacterial Cultures 499 Experiment 52: Enzyme Induction 381 Experiment 53: Bacterial PART 16 Immunology 507 Conjugation 387 Introduction 507 Experiment 54: Isolation of a Experiment 69: Precipitin Reaction: Streptomycin-Resistant Mutant 393 The Ring Test 509 Experiment 55: The Ames Test: Experiment 70: Agglutination A Bacterial Test System for Chemical Reaction: The Febrile Antibody Carcinogenicity 397 Test 513 Experiment 71: Enzyme-Linked PART 14 Biotechnology 403 Immunosorbent Assay 519 Experiment 72: Sexually Introduction 403 Transmitted Diseases: Rapid Experiment 56: Bacterial Immunodiagnostic Procedures 523 Transformation 405 Part A: Rapid Plasma Reagin Test Experiment 57: Isolation of Bacterial for Syphilis 523 Plasmids 413 Part B: Genital Herpes: Isolation Experiment 58: Restriction Analysis and Identification of Herpes Simplex and Electrophoretic Separation of Virus 525 Bacteriophage Lambda DNA 423 Part C: Detection of Sexually Transmitted Chlamydial PART 15 Medical Microbiology 433 Diseases 526 Introduction 433 Appendices Experiment 59: Microbial Flora of the Mouth: Determination of Appendix 1: Scientific Notation 531 Susceptibility to Dental Caries 435 Appendix 2: Methods for the Experiment 60: Normal Preparation of Dilutions 533 Microbial Flora of the Throat and Appendix 3: Microbiological Skin 439 Media 535 Part A: Isolation of Microbial Appendix 4: Biochemical Test flora 439 Reagents 541 Part B: Effectiveness of Appendix 5: Staining Reagents 544 Handwashing 443 Appendix 6: Experimental Experiment 61: Identification of Microorganisms 545 Human Staphylococcal Pathogens 451 Art & Photo Credits 547 Experiment 62: Identification of Human Streptococcal Pathogens 459 Index 549 Contents 9