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Kaplan High-Yield Behavioral PDF

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Lecture Objectives Epidemiology Sam Asgarian, M4 Tulane University BBEE0011-- !1" Epidemiology advice Epidemiology advice •  Easy section = easy to overlook •  Points here can add up: make sure to prep as you do for any Step 1 section and do not cram ! get all these points on Test Day! •  Become more ingrained in the test FA 2012: n/a • FA 2011: n/a • FA 2010: n/a BE01- 2 Incidence Incidence Incidence rate: the rate at which new events occur in a population.The numerator is the number of NEW events that occur in a defined period; the denominator is the population at risk of experiencing this new event during the same period. # of new events in a specific period of time Incidence = # “at risk” of having a new event in the specific time period a.  Attack rate: a type of incidence rate in which the denominator is further reduced for some known exposure b.  Focus on acute conditions FA 2012: 54.1 • FA 2011: 52.1 • FA 2010: 54 • BE01- 3 ME 3e: 34 Prevalence Prevalence Prevalence rate: all persons who experience an event in a population. The numerator is ALL individuals who have an attribute or disease at a particular point in time (or during a particular period of time); the denominator is the population at risk of having the attribute or disease at this point in time or midway through the period. # of individuals with disease/attribute Prevalence = Total population at risk •  Point prevalence: prevalence at a specified point in time •  Period prevalence: prevalence during a specified period or span of time •  Focus on chronic conditions FA 2012: 54.1 • FA 2011: 52.1 • FA 2010: 54 • BE01- 4 ME 3e: 34 Clinical Trials Clinical Trials •  Clinical Trials 1.  Control group: subjects who do not receive the intervention under study; used as a source of comparison to be certain that the experiment group is being affected by the intervention and not by other factors. In clinical trials, this is most often a placebo group. 2.  For Food and Drug Administration (FDA) approval, three phases of clinical trials must be passed. a.  Phase One: testing safety in healthy volunteers b.  Phase Two: testing protocol and dose levels in a small group of patient volunteers c.  Phase Three: testing efficacy and occurrence of side effects in a larger group of patient volunteers. Phase III is considered the definitive test. d.  Post-marketing Survey: collecting reports of drug side effects when out in common usage (post-FDA approval) FA 2012: 52.2 • FA 2011: 50.2 • FA 2010: 52 BE01- 5 Case-control and Cross-sectional studies Case-control and Cross-sectional studies •  STUDIES: •  Case-control study: identifies a group of people with the disease and compares them with a suitable comparison group without the disease. Almost always retrospective (e.g., comparing cases of treatment-resistant TB with cases of nonresistant TB) a.  Cannot assess incidence or prevalence of disease b.  Can help determine causal relationships c.  Very useful for studying conditions with very low incidence or prevalence •  Cross-sectional study: the presence or absence of disease and other variables are determined in each member of the study population or in a representative sample at a particular time. The co-occurrence of a variable and the disease can be examined. a.  Disease prevalence rather than incidence is recorded b.  The temporal sequence of cause and effect cannot usually be determined in a cross-sectional study c.  Example: who in the community now has treatment-resistant TB FA 2012: 52.1 • FA 2011: 50.1 • FA 2010: 52 • BE01- 6 ME 3e: 35 Cohort Study Cohort Study Cohort study: population group of those who have been exposed to risk factor is identified and followed over time and compared with a group not exposed to the risk factor. Outcome is disease incidence in each group (e.g., following a group of individuals forward in time and comparing the development of lung cancer in those who smoke and in those who don’t smoke). •  Prospective; subjects tracked forward in time •  Can determine incidence and causal relationships •  Must follow population long enough for incidence to appear FA 2012: 52.1 • FA 2011: 50.1 • FA 2010: 52 • BE01- 7 ME 3e: 34 Difference between studies by time Difference between studies by time Differentiating Study Types by Time FA 2012: 52.1 • FA 2011: 50.1 • FA 2010: 52 • BE01- 8 ME 3e: 35 Twin and Adoption Studies Twin and Adoption Studies •  Measuring inheritance of a genetic disease/disorder: •  Twins: monozygotic and dizygotic •  Adoption: nature vs. nurture FA 2012: 52.1 • FA 2011: 50.1 • FA 2010: 52 BE01- 9 Diagnostic Tests Diagnostic Tests Diagnostic Tests –  Will be covered on the exam –  Pregnancy test example (don’t want false positive, but really don’t want a false negative ! will take risks, etc) –  Know this table (Table 1-4): FA 2012: 53.1 • FA 2011: 51.1 • FA 2010: 53 BE01- 10 Sensitivity Sensitivity Sensitivity: the probability of correctly identifying a case of disease. Sensitivity is the proportion of truly diseased persons in the screened population who are identified as diseased by the screening test. This is also known as the “true positive rate.” TP Sensitivity = TP+FN true positives/(true positives + false negatives) –  Measures only the distribution of persons with disease –  Uses data from the left column (Table 1-4) –  Note: 1-sensitivity = false negative rate FA 2012: 53.1 • FA 2011: 51.1 • FA 2010: 53 • BE01- 11 ME 3e: 34 Specificity Specificity Specificity: the probability of correctly identifying disease-free persons. Specificity is the proportion of truly nondiseased persons who are identified as nondiseased by the screening test. This is also known as the “true negative rate.” TN Specificity = TN+FP true negatives/(true negatives + false positives) –  Measures only the distribution of persons who are disease-free –  Uses data from the right column (Table 1-4) –  Note: 1-specificity = false positive rate FA 2012: 53.1 • FA 2011: 51.1 • FA 2010: 53 • BE01- 12 ME 3e: 34 Positive Predictive Value Positive Predictive Value Positive predictive value: the probability of disease in a person who receives a positive test result. The probability that a person with a positive test is a true positive. (i.e., has the disease) is referred to as the “predictive value of a positive test.” TP Positive predictive value = TP+FP true positives/(true positives + false positives) –  Measures only the distribution of persons who receive a positive test result –  Uses data from the top row of the (Table 1-4) FA 2012: 53.1 • FA 2011: 51.1 • FA 2010: 53 • BE01- 13 ME 3e: 34 Negative Predictive Value Negative Predictive Value Negative predictive value: the probability of no disease in a person who receives a negative test result. The probability that a person with a negative test is a true negative (i.e., does not have the disease) is referred to as the “predictive value of a negative test.” TN Negative predictive value = TN+FN true negatives/(true negatives + false negatives) –  Measures only the distribution of persons who receive a negative test result –  Uses data from the bottom row (Table 1-4) FA 2012: 53.1 • FA 2011: 51.1 • FA 2010: 53 • BE01- 14 ME 3e: 34 Meta-analysis Meta-analysis •  Meta-analysis: a.  A statistical way of combining the results of many studies to produce one overall conclusion b.  A mathematic literature review –  Highest level of clinical evidence used to make an argument for or against something FA 2012: 58.2 • FA 2011: 50.3 • FA 2010: 52 BE01- 15 Accuracy and Precision Accuracy and Precision Accuracy: total percentage correctly selected; the degree to which a measurement, or an estimate based on measurements, represents the true value of the attribute that is being measured. TP + TN Accuracy = TP + FP + TN + FN (true positives + true negatives)/total screened patients Precision: ability of a test to measure something consistently, either across testing situations (test-retest reliability), within a test (split-half reliability), or across judges (inter-rater reliability) –  Reliability: think of the clustering of rifle shots at a target FA 2012: 55.1 • FA 2011: 52.3 • FA 2010: 54 • BE01- 16 ME 3e: 34 Odds Ratio Odds Ratio Odds ratio: looks at the increased odds of getting a disease with exposure to a risk factor versus nonexposure to that factor Disease Present Disease Absent (+) (-) Exposed group (risk factor +) A B Nonexposed group (risk factor -, control) C D A/B AD Odds Ratio = = C/D BC –  Odds of having disease in exposed group divided by odds of having disease in nonexposed group –  The odds that a person with lung cancer was a smoker versus the odds that a person without lung cancer was a smoker –  Odds ratio does not so much predict disease as estimate the strength of a risk factor FA 2012: 54.2 • FA 2011: 52.2 • FA 2010: 54 • BE01- 17 ME 3e: 35 Relative Risk Relative Risk Relative risk (RR): comparative probability asking “How much more likely?” Disease Present Disease Absent (+) (-) Exposed group (risk factor +) A B Nonexpos ed group (risk factor -, control) C D A/(A+B) Relative risk (RR) = C/(C+D) –  Incidence rate of exposed group divided by the incidence rate of the unexposed group –  How much greater chance does one group have of contracting the disease compared with the other group? –  For statistical analysis, yields a p-value FA 2012: 54.2 • FA 2011: 52.2 • FA 2010: 54 • BE01- 18 ME 3e: 35 Attributable Risk Attributable Risk Attributable risk (AR): comparative probability asking “How many more cases in one group?” Disease Present Disease Absent (+) (-) Exposed g roup (risk factor +) A B Nonexpos ed group (risk factor -, control) C D A C Attributable risk (AR) = ! A+B C+D –  Incidence rate of exposed group minus the incidence rate of the unexposed group –  Note that both relative risk and attributable risk tell us if there are differences, but do not tell us why those differences exist. FA 2012: 54.2 • FA 2011: 52.2 • FA 2010: 54 • BE01- 19 ME 3e: 35 Types of Bias in Research Types of Bias in Research FA 2012: 56.1 • FA 2011: 53.1 • FA 2010: 55 • BE01- 20 ME 3e: 35

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