2nd Edition ’ TM HARRISON S InfectIous DIseases Derived from Harrison’s Principles of Internal Medicine, 18th Edition Editors Dan L. Longo, anthony s. Fauci, md md Professor of Medicine, Harvard Medical School; Chief, Laboratory of Immunoregulation; Director, Senior Physician, Brigham and Women’s Hospital; National Institute of Allergy and Infectious Diseases, Deputy Editor, New England Journal of Medicine, National Institutes of Health, Bethesda, Maryland Boston, Massachusetts DEnnis L. KaspEr, stEphEn L. hausEr, md md William Ellery Channing Professor of Medicine and Robert A. Fishman Distinguished Professor and Chairman, Professor of Microbiology and Immunobiology, Department of Neurology, Division of Immunology, Department of Microbiology University of California, San Francisco, and Immunobiology, Harvard Medical School, San Francisco, California Boston, Massachusetts J. Larry JamEson, , JosEph LoscaLzo, , md phd md phd Robert G. Dunlop Professor of Medicine; Hersey Professor of the Theory and Practice of Medicine, Dean, University of Pennsylvania School of Medicine; Harvard Medical School; Executive Vice-President of the University of Pennsylvania for the Chairman, Department of Medicine; Health System, Philadelphia, Pennsylvania Physician-in-Chief, Brigham and Women’s Hospital, Boston, Massachusetts 2nd Edition ’ TM HARRISON S InfectIous DIseases EDitors Dennis L. Kasper, mD William Ellery Channing Professor of Medicine and Professor of Microbiology and Immunobiology, Division of Immunology, Department of Microbiology and Immunobiology, Harvard Medical School, Boston, Massachusetts anthony s. Fauci, mD Chief, Laboratory of Immunoregulation; Director, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland New York Chicago San Francisco Lisbon London Madrid Mexico City Milan New Delhi San Juan Seoul Singapore Sydney Toronto Copyright © 2013 by McGraw-Hill Education, LLC. All rights reserved. Except as permitted under the United States Copyright Act of 1976, no part of this publication may be reproduced or distributed in any form or by any means, or stored in a database or retrieval system, without the prior written permission of the publisher. ISBN: 978-0-07-181483-6 MHID: 0-07-181483-3 The material in this eBook also appears in the print version of this title: ISBN: 978-0-07-181482-9, MHID: 0-07-181482-5. All trademarks are trademarks of their respective owners. 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Under no circumstances shall McGraw-Hill Education and/or its licensors be liable for any indirect, incidental, special, punitive, consequential or similar damages that result from the use of or inability to use the work, even if any of them has been advised of the possibility of such damages. This limitation of liability shall apply to any claim or cause whatsoever whether such claim or cause arises in contract, tort or otherwise. CONTENTS Contributors . . . . . . . . . . . . . . . . . . . . . . . . . . . . . xi 14. Health Care–Associated Infections . . . . . . . . .159 Robert A. Weinstein Preface . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . xix 15. Approach to the Acutely Ill Infected Febrile Patient . . . . . . . . . . . . . . . . . . . . . . . .169 section i Tamar F. Barlam, Dennis L. Kasper INTRODUCTION TO INFECTIOUS DISEASES 16. Severe Sepsis and Septic Shock . . . . . . . . . . .179 1. Introduction to Infectious Diseases: Robert S. Munford Host–Pathogen Interactions . . . . . . . . . . . . . . .2 Lawrence C. Madoff, Dennis L. Kasper section iii 2. Molecular Mechanisms of Microbial INFECTIONS IN ORGAN SYSTEMS Pathogenesis . . . . . . . . . . . . . . . . . . . . . . . . . . .9 Gerald B. Pier 17. Pharyngitis, Sinusitis, Otitis, and Other Upper Respiratory Tract Infections . . . . . . . .192 3. The Human Microbiome . . . . . . . . . . . . . . . .22 Michael A. Rubin, Larry C. Ford, Ralph Gonzales Jeffrey I. Gordon, Rob Knight 18. Pneumonia . . . . . . . . . . . . . . . . . . . . . . . . . .207 4. Immunization Principles and Vaccine Use . . . .32 Lionel A. Mandell, Richard Wunderink Anne Schuchat, Lisa A. Jackson 19. Bronchiectasis and Lung Abscess . . . . . . . . . .221 5. Health Recommendations for Rebecca M. Baron, John G. Bartlett International Travel . . . . . . . . . . . . . . . . . . . . .47 Jay S. Keystone, Phyllis E. Kozarsky 20. Infective Endocarditis . . . . . . . . . . . . . . . . . .227 Adolf W. Karchmer 6. Laboratory Diagnosis of Infectious Diseases . . . .58 Alexander J. McAdam, Andrew B. Onderdonk 21. Pericardial Disease . . . . . . . . . . . . . . . . . . . . .241 Eugene Braunwald 7. Microbial Bioterrorism . . . . . . . . . . . . . . . . . .71 H. Clifford Lane, Anthony S. Fauci 22. Infections of the Skin, Muscles, and Soft Tissues . . . . . . . . . . . . . . . . . . . . . . . . . .251 Dennis L. Stevens section ii FEVER AND APPROACH TO THE 23. Osteomyelitis . . . . . . . . . . . . . . . . . . . . . . . .259 FEBRILE PATIENT Alan D. Tice 8. Fever and Hyperthermia . . . . . . . . . . . . . . . . .86 24. Infectious Arthritis . . . . . . . . . . . . . . . . . . . .266 Charles A. Dinarello, Reuven Porat Lawrence C. Madoff 9. Fever and Rash . . . . . . . . . . . . . . . . . . . . . . . .91 25. Intraabdominal Infections and Abscesses . . . . .274 Elaine T. Kaye, Kenneth M. Kaye Miriam J. Baron, Dennis L. Kasper 10. Fever of Unknown Origin . . . . . . . . . . . . . . .107 26. Acute Infectious Diarrheal Diseases Jeffrey A. Gelfand, Michael V. Callahan and Bacterial Food Poisoning . . . . . . . . . . . . .282 Regina C. LaRocque, Edward T. Ryan, 11. Atlas of Rashes Associated with Fever . . . . . .115 Stephen B. Calderwood Kenneth M. Kaye, Elaine T. Kaye 27. Acute Appendicitis and Peritonitis . . . . . . . . .290 12. Infections in Patients with Cancer . . . . . . . . .129 William Silen Robert Finberg 28. Urinary Tract Infections, Pyelonephritis, 13. Infections in Transplant Recipients . . . . . . . .143 and Prostatitis . . . . . . . . . . . . . . . . . . . . . . . .295 Robert Finberg, Joyce Fingeroth Kalpana Gupta, Barbara W. Trautner v vi Contents 29. Interstitial Cystitis/Painful 45. Botulism . . . . . . . . . . . . . . . . . . . . . . . . . . . .471 Bladder Syndrome . . . . . . . . . . . . . . . . . . . . .305 Jeremy Sobel, Susan Maslanka John W. Warren 46. Gas Gangrene and Other Clostridial 30. Sexually Transmitted Infections: Infections . . . . . . . . . . . . . . . . . . . . . . . . . . .475 Overview and Clinical Approach . . . . . . . . . .309 Amy E. Bryant, Dennis L. Stevens Jeanne M. Marrazzo, King K. Holmes 47. Clostridium difficile Infection, Including 31. Meningitis, Encephalitis, Brain Abscess, Pseudomembranous Colitis . . . . . . . . . . . . . .483 and Empyema . . . . . . . . . . . . . . . . . . . . . . . .330 Dale N. Gerding, Stuart Johnson Karen L. Roos, Kenneth L. Tyler 48. Meningococcal Infections . . . . . . . . . . . . . . .488 32. Chronic and Recurrent Meningitis . . . . . . . .362 Andrew J. Pollard Walter J. Koroshetz, Morton N. Swartz 49. Gonococcal Infections . . . . . . . . . . . . . . . . . .499 33. Chronic Fatigue Syndrome . . . . . . . . . . . . . .369 Sanjay Ram, Peter A. Rice Gijs Bleijenberg, Jos W.M. van der Meer 50. Haemophilus and Moraxella Infections . . . . . . .508 34. Infectious Complications of Burns . . . . . . . . .373 Timothy F. Murphy Lawrence C. Madoff, Florencia Pereyra 51. Infections Due to the HACEK Group and 35. Infectious Complications of Bites . . . . . . . . . .377 Miscellaneous Gram-Negative Bacteria . . . . .515 Lawrence C. Madoff, Florencia Pereyra Tamar F. Barlam, Dennis L. Kasper 52. Legionella Infections . . . . . . . . . . . . . . . . . . . .519 Miguel Sabria, Victor L. Yu section iV 53. Pertussis and Other Bordetella Infections . . . . .525 BACTERIAL INFECTIONS Scott A. Halperin 36. Treatment and Prophylaxis of 54. Diseases Caused by Gram-Negative Bacterial Infections . . . . . . . . . . . . . . . . . . . .384 Enteric Bacilli . . . . . . . . . . . . . . . . . . . . . . . .531 Gordon L. Archer, Ronald E. Polk Thomas A. Russo, James R. Johnson 37. Pneumococcal Infections . . . . . . . . . . . . . . . .405 55. Acinetobacter Infections . . . . . . . . . . . . . . . . . .546 David Goldblatt, Katherine L. O’Brien David L. Paterson, Anton Y. Peleg 38. Staphylococcal Infections . . . . . . . . . . . . . . . .416 56. Helicobacter pylori Infections . . . . . . . . . . . . . .549 Franklin D. Lowy John C. Atherton, Martin J. Blaser 39. Streptococcal Infections . . . . . . . . . . . . . . . . .429 57. Infections Due to Pseudomonas Species and Michael R. Wessels Related Organisms . . . . . . . . . . . . . . . . . . . .555 Reuben Ramphal 40. Enterococcal Infections . . . . . . . . . . . . . . . . .441 Cesar A. Arias, Barbara E. Murray 58. Salmonellosis. . . . . . . . . . . . . . . . . . . . . . . . .565 David A. Pegues, Samuel I. Miller 41. Acute Rheumatic Fever . . . . . . . . . . . . . . . .449 Jonathan R. Carapetis 59. Shigellosis . . . . . . . . . . . . . . . . . . . . . . . . . . .574 Philippe Sansonetti, Jean Bergounioux 42. Diphtheria and Other Infections Caused by Corynebacteria and 60. Infections Due to Campylobacter Related Species . . . . . . . . . . . . . . . . . . . . . . .456 and Related Organisms . . . . . . . . . . . . . . . . .579 William R. Bishai, John R. Murphy Martin J. Blaser 43. Listeria monocytogenes Infections . . . . . . . . . . . .463 61. Cholera and Other Vibrioses . . . . . . . . . . . . .583 Elizabeth L. Hohmann, Daniel A. Portnoy Matthew K. Waldor, Edward T. Ryan 44. Tetanus . . . . . . . . . . . . . . . . . . . . . . . . . . . .467 62. Brucellosis . . . . . . . . . . . . . . . . . . . . . . . . . .591 C. Louise Thwaites, Lam Minh Yen Michael J. Corbel, Nicholas J. Beeching Contents vii 63. Tularemia . . . . . . . . . . . . . . . . . . . . . . . . . . .597 section V Richard F. Jacobs, Gordon E. Schutze VIRAL INFECTIONS 64. Plague and Other Yersinia Infections . . . . . . . .602 82. Medical Virology . . . . . . . . . . . . . . . . . . . . .758 Michael B. Prentice Fred Wang, Elliott Kieff 65. Bartonella Infections, Including 83. Antiviral Chemotherapy, Excluding Cat-Scratch Disease . . . . . . . . . . . . . . . . . . . .613 Antiretroviral Drugs . . . . . . . . . . . . . . . . . . .770 Michael Giladi, Moshe Ephros Lindsey R. Baden, Raphael Dolin 66. Donovanosis . . . . . . . . . . . . . . . . . . . . . . . . .621 84. Herpes Simplex Virus Infections . . . . . . . . . .784 Nigel O’Farrell Lawrence Corey 67. Nocardiosis . . . . . . . . . . . . . . . . . . . . . . . . . .623 85. Varicella-Zoster Virus Infections . . . . . . . . . .796 Gregory A. Filice Richard J. Whitley 68. Actinomycosis . . . . . . . . . . . . . . . . . . . . . . . .628 86. Epstein-Barr Virus Infections, Thomas A. Russo Including Infectious Mononucleosis . . . . . . . .801 Jeffrey I. Cohen 69. Infections Due to Mixed Anaerobic Organisms . . . . . . . . . . . . . . . . . . . . . . . . . .633 87. Cytomegalovirus and Human Dennis L. Kasper, Ronit Cohen-Poradosu Herpesvirus Types 6, 7, and 8 . . . . . . . . . . . .807 Martin S. Hirsch 70. Tuberculosis . . . . . . . . . . . . . . . . . . . . . . . . .644 Mario C. Raviglione, Richard J. O’Brien 88. Molluscum Contagiosum, Monkeypox, and Other Poxvirus Infections . . . . . . . . . . . .813 71. Leprosy. . . . . . . . . . . . . . . . . . . . . . . . . . . . .668 Fred Wang Robert H. Gelber 89. Parvovirus Infections . . . . . . . . . . . . . . . . . . .815 72. Nontuberculous Mycobacterial Infections . . . .678 Kevin E. Brown Steven M. Holland 90. Human Papillomavirus Infections . . . . . . . . . .819 73. Antimycobacterial Agents . . . . . . . . . . . . . . .683 Richard C. Reichman Max R. O’Donnell, Jussi J. Saukkonen 74. Syphilis . . . . . . . . . . . . . . . . . . . . . . . . . . . . .694 91. Common Viral Respiratory Infections . . . . . .823 Sheila A. Lukehart Raphael Dolin 75. Endemic Treponematoses . . . . . . . . . . . . . . .705 92. Influenza . . . . . . . . . . . . . . . . . . . . . . . . . . .833 Sheila A. Lukehart Raphael Dolin 76. Leptospirosis . . . . . . . . . . . . . . . . . . . . . . . . .709 93. Human Immunodeficiency Virus Disease: Joseph M. Vinetz AIDS and Related Disorders . . . . . . . . . . . . .842 Anthony S. Fauci, H. Clifford Lane 77. Relapsing Fever . . . . . . . . . . . . . . . . . . . . . .716 Mark S. Dworkin 94. Viral Gastroenteritis . . . . . . . . . . . . . . . . . . . .942 Umesh D. Parashar, Roger I. Glass 78. Lyme Borreliosis . . . . . . . . . . . . . . . . . . . . . .720 Allen C. Steere 95. Acute Viral Hepatitis . . . . . . . . . . . . . . . . . . .949 Jules L. Dienstag 79. Rickettsial Diseases . . . . . . . . . . . . . . . . . . . .727 David H. Walker, J. Stephen Dumler, 96. Chronic Hepatitis . . . . . . . . . . . . . . . . . . . . .974 Thomas Marrie Jules L. Dienstag 80. Infections Due to Mycoplasmas . . . . . . . . . . .740 97. Enteroviruses and Reoviruses . . . . . . . . . . . .1001 R. Doug Hardy Jeffrey I. Cohen 81. Chlamydial Infections . . . . . . . . . . . . . . . . . .744 98. Measles (Rubeola) . . . . . . . . . . . . . . . . . . . .1009 Charlotte A. Gaydos, Thomas C. Quinn William J. Moss viii Contents 99. Rubella (German Measles) . . . . . . . . . . . . . .1015 section Viii Laura A. Zimmerman, Susan E. Reef PROTOZOAL AND HELMINTHIC INFECTIONS 100. Mumps . . . . . . . . . . . . . . . . . . . . . . . . . . . .1019 Steven Rubin, Kathryn M. Carbone 115. Laboratory Diagnosis of Parasitic Infections . . .1114 Sharon L. Reed, Charles E. Davis 101. Rabies and Other Rhabdovirus Infections . . .1023 Alan C. Jackson 116. Agents Used to Treat Parasitic Infections . . . . . . . . . . . . . . . . . . . . . . . . . .1123 102. Infections Caused by Arthropod- and Thomas A. Moore Rodent-Borne Viruses . . . . . . . . . . . . . . . .1030 Clarence J. Peters 117. Pharmacology of Agents Used to Treat Parasitic Infections . . . . . . . . . . . . . . .1133 103. Ebola and Marburg Viruses . . . . . . . . . . . . .1051 Thomas A. Moore Clarence J. Peters 118. Amebiasis and Infection with Free-Living Amebas . . . . . . . . . . . . . . . . . .1144 section Vi Samuel L. Stanley, Jr. PRION DISEASES 119. Malaria . . . . . . . . . . . . . . . . . . . . . . . . . . . .1151 104. Prion Diseases . . . . . . . . . . . . . . . . . . . . . . .1058 Nicholas J. White, Joel G. Breman Stanley B. Prusiner, Bruce L. Miller 120. Babesiosis . . . . . . . . . . . . . . . . . . . . . . . . . .1174 Edouard Vannier, Jeffrey A. Gelfand section Vii FUNGAL INFECTIONS 121. Atlas of Blood Smears of Malaria and Babesiosis . . . . . . . . . . . . . . . . . . . . . . .1177 105. Diagnosis and Treatment of Fungal Nicholas J. White, Joel G. Breman Infections . . . . . . . . . . . . . . . . . . . . . . . . . .1068 122. Leishmaniasis . . . . . . . . . . . . . . . . . . . . . . .1181 John E. Edwards, Jr. Shyam Sundar 106. Histoplasmosis . . . . . . . . . . . . . . . . . . . . . . .1072 123. Chagas’ Disease and Trypanosomiasis . . . . . .1191 Chadi A. Hage, L. Joseph Wheat Louis V. Kirchhoff, Anis Rassi, Jr. 107. Coccidioidomycosis . . . . . . . . . . . . . . . . . .1075 124. Toxoplasma Infections . . . . . . . . . . . . . . . . .1197 Neil M. Ampel Kami Kim, Lloyd H. Kasper 108. Blastomycosis . . . . . . . . . . . . . . . . . . . . . . .1079 125. Protozoal Intestinal Infections Stanley W. Chapman, Donna C. Sullivan and Trichomoniasis . . . . . . . . . . . . . . . . . . .1207 109. Cryptococcosis . . . . . . . . . . . . . . . . . . . . . .1082 Peter F. Weller Arturo Casadevall 126. Trichinellosis and Other Tissue 110. Candidiasis . . . . . . . . . . . . . . . . . . . . . . . . .1085 Nematode Infections . . . . . . . . . . . . . . . . . .1214 John E. Edwards, Jr. Peter F. Weller 111. Aspergillosis . . . . . . . . . . . . . . . . . . . . . . . .1090 127. Intestinal Nematode Infections . . . . . . . . . . .1219 David W. Denning Peter F. Weller, Thomas B. Nutman 112. Mucormycosis . . . . . . . . . . . . . . . . . . . . . . .1096 128. Filarial and Related Infections . . . . . . . . . . .1226 Brad Spellberg, Ashraf S. Ibrahim Thomas B. Nutman, Peter F. Weller 113. Superficial Mycoses and Less 129. Schistosomiasis and Other Common Systemic Mycoses . . . . . . . . . . . .1101 Trematode Infections . . . . . . . . . . . . . . . . .1235 Carol A. Kauffman Adel A. F. Mahmoud 114. Pneumocystis Infections . . . . . . . . . . . . . . . . .1108 130. Cestode Infections . . . . . . . . . . . . . . . . . . . .1244 A. George Smulian, Peter D. Walzer A. Clinton White, Jr., Peter F. Weller Contents ix section iX Appendix ENVENOMATIONS, INFESTATIONS, Laboratory Values of Clinical Importance . . . . . . .1277 BITES, AND STINGS Alexander Kratz, Michael A. Pesce, Robert C. Basner, Andrew J. Einstein 131. Disorders Caused by Venomous Review and Self-Assessment . . . . . . . . . . . . . .1303 Snakebites and Marine Animal Charles M. Wiener, Cynthia D. Brown, Exposures . . . . . . . . . . . . . . . . . . . . . . . . . .1254 Anna R. Hemnes Paul S. Auerbach, Robert L. Norris 132. Ectoparasite Infestations and Index . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .1351 Arthropod Bites and Stings . . . . . . . . . . . . .1266 Richard J. Pollack