Gene Structure and Expression 1994: Vol 1219 Table of Contents

5 Pages·1994·2.4 MB·English

BBA
Gene Structure and Expression
ay A Vol. 1219, 1994 Biochimica
et Biophysica Acta
LSEVIER
Cumulative Contents
Information for Contributors vii Relative contribution of photo-addition, helper oligo-
nucleotide and RNase H to the antisense effect of
Regular Papers psoralen-oligonucleotide conjugates, on in vitro
translation of Leishmania mRNAs
Only cytidines 5’ of the apolipoprotein B mRNA E. Pascolo, D. Hudrisier, B. Sproat, N.T. Thuong
and J.-J. Toulmé (France, Germany)
mooring sequence are edited
DNA unknotting activity (DNA topoisomerase II)
J.W. Backus, D. Schock and H.C. Smith (USA)
Structure, promoter analysis and chromosomal as- isolated from a thermophilic archaebacterium Sul-
signment of the human APEX gene folobus is inhibited by novobiocin. Partial purifi-
K. Akiyama, S. Seki, T. Oshida and M.C. Yoshida cation, identification of the two subunits and char-
(Japan) acteristics of the enzyme
L.M. Assairi (France)
Isolation and characterization of a novel cDNA from
HL-60 cells treated with 1,25-dihydroxyvitamin Binding of a bZip protein to the estrogen-inducible
D-3 apoVLDL II promoter
K.-S. Chen and H.F. DeLuca (USA) M.P. Smidt, J. Wijnholds, L. Snippe, G. Van
Developmental expression of sarcomeric and ubi- Keulen and G. AB (The Netherlands)
quitous mitochondrial creatine kinase is tissue- Molecular cloning of cDNA for XTCAD-1, a novel
specific Xenopus cadherin, and its expression in adult
R.M. Payne and A.W. Strauss (USA) tissues and embryos of Xenopus laevis
Nuclear proteins interacting with DNA and tubulin. O. Tooi, G. Fujii, K. Tashiro and K. Shiokawa
(Japan)
Study of the interaction of the High Mobility
Group protein 1 with tubulin Gene structure and cell type-specific expression of
A. Briolay, B. Rousset and B. Roux (France) the human ATP synthase a@ subunit
Purification of Caenorhabditis elegans DNA topo- S. Akiyama, H. Endo, N. Inohara, S. Ohta and Y.
Kagawa (Japan) 129
isomerase I
S.M. Park and H.-S. Koo (South Korea)
Binding of AP-1/CREB proteins and of MDBP to Short Sequence-Papers and Promoter Papers
contiguous sites downstream of the human TGF-
B1 gene A conserved sequence in tRNA and rRNA promoters
C.K. Asiedu, L. Scotto, R.K. Assoian and M. Ehr- of Lactococcus lactis
lich (USA) D. Nilsson and E. Johansen (Denmark)
Cloning, nucleotide sequence and expression of rat Characterisation and expression of a maize U3
heat inducible hsp70 gene snRNA gene
K. Lisowska, Z. Krawczyk, W. Widtak, P. Wol- D.J. Leader, S. Connelly, W. Filipowicz and
niczek and J. Wisniewski (Poland) J.W.S. Brown (UK, Switzerland)
Protein engineering of the restriction endonuclease Cloning and nucleotide sequence of cDNA encoding
EcoRV: replacement of an amino acid residue in Asp-hemolysin from Aspergillus fumigatus
the DNA binding site leads to an altered selectiv- K. Ebina, H. Sakagami, K. Yokota and H. Kondo
ity towards unmodified and modified substrates (Japan)
C. Wenz, U. Selent, W. Wende, A. Jeltsch, H. Large and small subunits of the Aujeszky’s disease
Wolfes and A. Pingoud (Germany) virus ribonucleotide reductase: nucleotide se-
Transcriptional activity of the CD45 gene promoter quence and putative structure
in retroviral vector constructs A.V. Kaliman, Z. Boldogkéi and I. Fodor
D.S. Anson and T. Occhiodoro (Australia) (Hungary)
Chemical secondary structure probing of two highly Instability of human TATA-binding protein CAG
methylated regions in Xenopus laevis 28S riboso- triplet repeats during amplification by PCR
mal RNA F.C.P. Holstege, P.C. Van der Vliet and H.Th.M.
P.M. Ajuh and E.B. Maden (UK) Timmers (The Netherlands)
730 Cumulative Contents
Nucleotide sequence of the cDNA encoding human SWH1 from yeast encodes a candidate nuclear factor
helix-loop-helix Id-1 protein: identification of containing ankyrin repeats and showing homology
functionally conserved residues common to Id to mammalian oxysterol-binding protein
proteins W.A. Schmalix and W. Bandlow (Germany)
R.W. Deed, M. Jasiok and J.D. Norton (UK) Atlantic cod cDNA encoding a psychrophilic chymo-
Nucleotide and derived amino acid sequences of an trypsinogen :
extracellular sucrase gene (invB) of Zymomonas A. Gudmundsdottir, S. Oskarsson, A.E. Eakin,
mobilis ZM1 (ATCC10988) C.S. Craik and J.B. Bjarnason (Iceland, USA)
K.-B. Song, S.-K. Lee, H.-K. Joo and S.-K. Rhee Cloning and sequencing of cDNAs for rabbit pre-
(South Korea) proacrosin and a novel preproacrosin-related
Complete nucleotide and deduced amino acid se- cDNA
quence of rat amyloid protein precusor-like pro- R.T. Richardson and M.G. O’Rand (USA)
tein 2 (APLP2/APPH): two amino acids length The nucleotide sequence of the murine Hox-D3
difference to human and murine homologues (Hox-4.1) gene reveals extensive identity with the
R. Sandbrink, C.L. Masters and K. Beyreuther human protein
(Germany, Australia) W.M. Brown, L. Zhou and G.R. Taylor (USA,
Molecular cloning and sequence analysis of rat Canada)
bradykinin B, receptor gene Cloning and characterization of a full-length cDNA
D.-z. Wang, J.-x. Ma, L. Chao and J. Chao (USA) coding for ovine aldolase B from fetal meso-
Cloning and sequencing of the groESL homologue nephros
from Porphyromonas gingivalis L. Gianquinto, E.A. Pailhoux, J. Bezard, N. Servel,
H. Hotokezaka, H. Hayashida, N. Ohara, H. No- M. Kirszenbaum and C. Cotinot (France)
maguchi, K. Kobayashi and T. Yamada (Japan) The integrin a@, gene: identification and charac-
Cloning and nucleotide sequence of a bacterial cy- terization of the promoter region
tochrome P-450,\p5; gene encoding vitamin D-3 J.P. Donahue, N. Sugg and J. Hawiger (USA)
25-hydroxylase Evidence for the presence of a functional TATA box
H. Kawauchi, J. Sasaki, T. Adachi, K. Hanada, T. (ATAAAA) sequence in the gene for bovine
Beppu and S. Horinouchi (Japan) elastin
A vertebrate homolog of the actin-bundling protein A. Manohar and R.A. Anwar (Canada)
fascin Identification of 5’ regulatory regions of the human
J.C.M. Holthuis, V.T.G. Schoonderwoert and carnitine palmitoyltransferase II gene
G.J.M. Martens (The Netherlands)
L. Montermini, H. Wang, E. Verderio, F. Taroni,
Isolation, sequence analysis and characterization of a S. DiDonato and G. Finocchiaro (Italy)
cDNA encoding human chaperonin 10 Characterization of the S’-regulatory region of rat
J.J. Chen, D.J. McNealy, S. Dalal and E.J. An- Reg I gene
drophy (USA) H. Miyashita, H. Yonekura, M. Unno, Y. Suzuki,
A novel glucose-6-phosphate dehydrogenase in T. Watanabe, S. Moriizumi, S. Takasawa and H.
Plasmodium falciparum: cDNA and primary pro- Okamoto (Japan)
tein structure
M. Shahabuddin, D.J. Rawlings and D.C. Kaslow Rapid Report
(USA)
Sequence of a novel pregnancy-specific B,-glyco- Ectopic expression of a viral adenine methyltrans-
protein C-terminal domain ferase gene in tobacco
T.W. Joe, P.A. McLenachan and B.C. Mansfield A. Mitra and Q. Que (USA)
(New Zealand)
Cloning and sequencing of the gene encoding the
Regular Papers
RpoS (KatF) o factor from Salmonella typhi-
murium 14028s
Molecular cloning and functional expression of a
R.W. Prince, Y. Xu, S.J. Libby and F.C. Fang
human thyrotropin-releasing hormone (TRH) re-
(USA)
ceptor gene
Stage-specific transcription of the homeobox gene
S. Hinuma, M. Hosoya, K. Ogi, H. Tanaka, Y.
Bnhd1 in young tissues and flowers of Brassica
Nagai and H. Onda (Japan)
napus
Mutagenesis of a highly conserved lysine 340 of the
R. Boivin, F. Hamel, D. Beauseigle and G. Belle-
PRD1 DNA polymerase
mare (Canada)
W. Zhu, M.C. Leavitt, G. Jung and J. Ito (USA)
Cumulative Contents
Purification and characterization of PRD1 DNA DNA binding mode of class-IIS restriction endonu-
polymerase clease FokI revealed by DNA footprinting analy-
W. Zhu and J. Ito (USA) sis
Macromolecular crowding effects on the interaction A. Yonezawa and Y. Sugiura (Japan)
of DNA with Escherichia coli DNA-binding pro- Characterization of an RNase H deficient mutant of
teins: a model for bacterial nucleoid stabilization human immunodeficiency virus-1 reverse tran-
L.D. Murphy and S.B. Zimmerman (USA) scriptase having an aspartate to asparagine change
Presence of regulatory sequences within intron 4 of at position 498
human and murine c-myb genes J.J. DeStefano, W. Wu, J. Seehra, J. McCoy, D.
T. Seib, C. Welter, M. Engel, B. Theisinger and S. Laston, E. Albone, P.J. Fay and R.A. Bambara
Dooley (Germany) (USA)
The RNA-binding properties of protein synthesis Affinity purification of sucrose binding proteins from
initiation factor eIF-2 the plant plasma membrane
A. Flynn, I.N. Shatsky, C.G. Proud and A. Kamin- Z.-S. Li, A.M. Noubhani, A. Bourbouloux and S.
ski (UK) Delrot (France)
Involvement of DNA polymerase 6 and/or € in The expression of Escherichia coli diaminopimelate
joining UV-induced DNA single strand breaks in decarboxylase in mouse 3T3 cells
human fibroblasts (comparison of effects of K.M. Saqib, S.M. Hay and W.D. Rees (UK)
butylphenyldeoxyguanosine with aphidicolin) Using linkers to investigate the spatial separation of
K. Yamada and R. Itoh (Japan) the conserved nucleotides A, and G,, in the
The 5’-flanking region of the a2MR/LRP gene hammerhead ribozyme
contains an enhancer-like cluster of Sp1 binding P. Hendry, M.J. Moghaddam, M.J. McCall, P.A.
sites Jennings, S. Ebel and T. Brown (Australia, UK)
B.A. Gaéta, I. Borthwick and K.K. Stanley Characterization of an Krox-24/Egr-1-responsive
(Australia) element in the human tumor necrosis factor pro-
DNA uptake stimulating protein from Neurospora moter
crassa enhances DNA and oligonucleotide uptake B. Kramer, A. Meichle, G. Hensel, P. Charnay
also in mammalian cells and M. Krénke (Germany)
G. Toth, J. Schlammadinger and G. Szabo Detection of small quantities of double stranded
(Hungary) DNA by enhanced fluorescence of substituted
Cloning and expression of the rabbit gastric CCK-A aldehyde modified polydeoxynucleotide-ethidium
receptor bromide complexes
M. Reuben, L. Rising, C. Prinz, S. Hersey and G. S. Premaratne, S.D. Swenson, M. Mandel and
Sachs (USA) H.F. Mower (USA)
Primary structure and expression of a human Functional interactions between translation, tran-
CTP: phosphocholine cytidylyltransferase scription and ppGpp in growing Escherichia coli
G.B. Kalmar, R.J. Kay, A.C. LaChance and R.B. M. Faxén and L.A. Isaksson (Sweden)
Cornell (Canada) Calretinin is expressed in the Leydig cells of rat
Retinoic acid-induced inhibition of type I collagen testis
gene expression by human lung fibroblasts K.I. Strauss, K.R. Isaacs, Q.N. Ha and D.M.
M. Krupsky, A. Fine, J.L. Berk and R.H. Gold- Jacobowitz (USA)
stein (USA) Transfer of a functional arabinose operator-repressor
Mode of action of poly(ADP-ribose) glycohydrolase system to Drosophila melanogaster Schneider
G. Brochu, C. Duchaine, L. Thibeault, J. Lagueux, line-2 cells
G.M. Shah and G.G. Poirier (Canada) V. Raman, K.N. Rand and R.J. Hill (Australia)
Transcriptional activation by hypersensitive site three Cloning, sequencing and expression of dinoflagellate
of the human #-globin locus control region in luciferase DNA from a marine alga, Gonyaulax
murine erythroleukemia cells polyedra
S. Pruzina, M. Antoniou, J. Hurst, F. Grosveld Y.M. Bae and J.W. Hastings (USA)
and S. Philipsen (UK) A birch gene family encoding pollen allergens and
Sequence analyses and inter-species comparisons of pathogenesis-related proteins
three novel human proteasomal subunits, HsN3, I. Swoboda, O. Scheiner, D. Kraft, M. Breiten-
HsC7-I and HsC10-II, confine potential prote- bach, E. Heberle-Bors and O. Vicente (Austria)
olytic active-site residues
H.G. Nothwang, T. Tamura, K. Tanaka and A.
Ichihara (Japan)
732 Cumulative Contents
Proximal 2.6 kb of 5’-flanking DNA is insufficient Cloning and sequencing of the tuf genes of Strepto-
for human renin promoter activity in renin-synthe- myces coelicolor A3(2)
sizing chorio-decidual cells G.P. Van Wezel, L.P. Woudt, R. Vervenne, M.L.A.
D.L. Smith, R.E. Law, K.J. Shaw, Y.S. Do, W.A. Verdurmen, E. Vijgenboom and L. Bosch (Nether-
Hsueh and B.J. Morris (USA, Australia) lands)
Selective suppression of cytochrome P-450 gene Cloning and nucleotide sequence of the gene encod-
expression by interleukins 1 and 6 in rat liver ing dinitrogenase reductase (nifH) from the
E.T. Morgan, K.B. Thomas, R. Swanson, T. Vales, cyanobacterium Nostoc 6720
J. Hwang and K. Wright (USA) C.E. Beesley, R.J. Smith, S.J. Temple and P.J.
Analysis of retrotransposon families in genomic DNA Lea (UK)
by two-dimensional restriction mapping: detection Tandem orientation of the inter-a-trypsin inhibitor
of VL30 insertions in mouse thymic lymphoma heavy chain H1 and H3 genes
N.S. French and J.D. Norton (UK) M. Diarra-Mehrpour, J. Bourguignon, N. Sarafan,
The impact of the PCR plateau phase on quantitative F. Bost, R. Sesboiié, F. Muschio-Bonnet and J.-P.
PCR Martin (France)
C. Morrison and F. Gannon (Ireland) Isolation and characterization of cDNA and genomic
Jun and Fos related gene products bind to and modu- promoter region for a heat shock protein 30 from
late the GPE I, a strong enhancer element of the Aspergillus nidulans
rat glutathione transferase P gene T. Kusakabe, K. Koga and Y. Sugimoto (Japan)
N. Oridate, S. Nishi, Y. Inuyama and M. Sakai Nucleotide sequence of the phosphotransacetylase
(Japan) gene of Escherichia coli strain K12
Two mutant binding sites of the activating transcrip- A. Matsuyama, H. Yamamoto-Otake, J. Hewitt,
tion factor region within the E2A promoter of R.T.A. MacGillivray and E. Nakano (Japan,
adenovirus exist in a novel conformation Canada)
K.L.B. Borden (UK) Human glutamate receptor hGluR3 flip and flop
Polymorphism of human transcobalamin II: substitu- isoforms: cloning and sequencing of the cDNAs
tion of proline and/or glutamine residues by argi- and primary structure of the proteins
nine V. Rampersad, C.E. Elliott, S.L. Nutt, R.L. Foldes
N. Li, G.K. Sood, S. Seetharam and B. Seetharam and R.K. Kamboj (Canada)
(USA) Structures of the human cDNA and gene encoding
Cloning and characterization of a major allergen of the 78 kDa gastrin-binding protein and of a re-
the house dust mite, Dermatophagoides pteronys- lated pseudogene
sinus, homologous with glutathione S-transferase Q.-X. Zhang and G.S. Baldwin (Australia)
G.M. O’Neill, G.R. Donovan and B.A. Baldo Molecular cloning of the Drosophila virilis larval
(Australia) glue protein gene Lgp-3 and its comparative anal-
ysis with other Drosophila glue protein genes
Short Sequence-Papers W. Lanio, U. Swida and H. Kress (Germany)
Obituary — Laurens L.M. van Deenen
cDNA sequence of zebrafish (Brachydanio rerio)
translation elongation factor-1a@: molecular phy-
Regular Papers
logeny of eukaryotes based on elongation factor-
la@ protein sequences
S. Nordnes, S. Krauss and T. Johansen (Norway, Sequence homology of Chinese hamster metallo-
UK) thionein genes I and II to those of the mouse and
The Leishmania infantum histone H3 possesses an rat, and their amplification in Cd-resistant cells
extremely divergent N-terminal domain K. Yamada, H. Kato, N. Kanda, Y. Fujii-
Kuriyama, T. Utakoji and R. Itoh (Japan)
M. Soto, J.M. Requena, G. Morales and C. Alonso
(Spain) Enhancement of bacterial transcription initiation in
The nucleotide and deduced amino acid sequences of vitro by the 74 kDa subunit of human general
a peptidyl-prolyl cis-trans isomerase from Ara- transcription factor IIF (RAP74)
bidopsis thaliana T. Chibazakura, S. Kitajima, M. Yonaha and Y.
G.T. Hayman and J.A. Miernyk (USA) Yasukochi (Japan) 592
Isolation of a new H3.3 histone variant cDNA of P.
lividus sea urchin: sequence and embryonic ex-
pression
L. Fucci, F. Aniello, M. Branno, E. Biffali and G.
Geraci (Italy)
Cumulative Contents
A gene of Acinetobacter calcoaceticus BD413 en- Cloning and characterization of a cDNA encoding
codes a periplasmic peptidyl-prolyl cis-trans iso- rat PKR, the double-stranded RNA-dependent
merase of the cyclophilin sub-class that is not eukaryotic initiation factor-2 kinase
essential for growth H. Mellor, K.M. Flowers, S.R. Kimball and L.S.
R.G. Kok, V.M. Christoffels, B. Vosman and K.J. Jefferson (USA)
Hellingwerf (The Netherlands) An archaeal S-layer gene homolog with repetitive
The establishment of the long terminal repeat of the subunits
mouse mammary tumor virus into CV-1 cells R. Yao, A.J.L. Macario and E. Conway de
allows a functional analysis of steroid receptors Macario (USA)
B. Couette, S. Le Ricousse, D. Fortin, M.E. Cloning and sequencing of a K* transport gene (irk
Rafestin-Oblin and H. Richard-Foy (France) A) from the marine bacterium Vibrio alginolyticus
Analysis of aggrecan and tenascin gene expression in T. Nakamura, Y. Matsuba, N. Yamamuro, LR.
mouse skeletal tissues by Northern and in situ Booth and T. Unemoto (Japan, UK)
hybridization using species specific cDNA probes cDNA sequence for bovine ribosomal protein L3
V. Glumoff, M. Savontaus, J. Vehanen and E. carrying a bipartite nuclear targeting motif, identi-
Vuorio (Finland) fied also in many other ribosomal proteins
Identification of multiple promoters within the N-ras T. Simonic, S. Gaudi, F. Giussani, M. Malcovati,
proto-oncogene S. Ronchi and M.L. Tenchini (Italy)
M. Jeffers and A. Pellicer (USA) Yeast homologue of mammalian Ran _ binding
Isolation of rat pgp3 cDNA: evidence for gender and protein 1
zonal regulation of expression in the liver G. Butler and K.H. Wolfe (Ireland)
K.N. Furuya, R. Gebhardt, E.G. Schuetz and J.D. Isolation and characterisation of the linked genes,
Schuetz (USA, Germany) FPS1 and QCR8, coding for farnesyl-diphosphate
Detection of a nuclear protein which binds specifi- synthase and the 11 kDa subunit VIII of the
cally to the antioxidant responsive element (ARE) mitochondrial bc,-complex in the yeast Kluy-
of the human NAD(P)H:quinone oxidoreductase veromyces lactis
gene W. Mulder, I.H.J.M. Scholten, B. Nagelkerken
B. Wang and G. Williamson (UK) and L.A. Grivell (The Netherlands)
Blasticidin S deaminase gene from Aspergillus ter- Isolation and characterisation of the linked genes
reus (BSD): a new drug resistance gene for trans- APA2 and QCR7, coding for Ap,A phosphory-
fection of mammalian cells lase II and the 14 kDa subunit VII of the mito-
M. Kimura, A. Takatsuki and I. Yamaguchi chondrial bc,-complex in the yeast Kluyvero-
(Japan) myces lactis
Differences in expression and intracellular distribu- W. Mulder, I.H.J.M. Scholten, H. Van Roon and
tion of hexokinase isoenzymes in rat liver cells of L.A. Grivell (The Netherlands)
different transformation stages
A. Rempel, P. Bannasch and D. Mayer (Germany) Rapid Report
Regulation of a,,-adrenergic receptor gene expres-
sion in rat liver cell lines In vitro repair of oxidative and ultraviolet-induced
C.-l. Deng and L.E. Cornett (USA) DNA damage in supercoiled nucleoid DNA by
ABFI contributes to the chromatin organization of human cell extract
Saccharomyces cerevisiae ARS1 B-domain A.R. Collins, ILM. Fleming and C.M. Gedik (UK)
P. Venditti, G. Costanzo, R. Negri and G. Camil-
loni (Italy) Cumulative Contents, Vol. 1219
Short Sequence-Papers and Promoter Papers Author Index
Isolation and characterisation of an alternatively-
spliced rat amelogenin cDNA: LRAP - a highly
conserved, functional alternatively-spliced amelo-
genin?
W.A. Bonass, J. Kirkham, S.J. Brookes, R.C. Shore
and C. Robinson (UK)