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Food Microbiology and Food Safety Practical Approaches Joshua B. Gurtler Michael P. Doyle Jeff rey L. Kornacki Editors Foodborne Pathogens Virulence Factors and Host Susceptibility Food Microbiology and Food Safety Series Editor: Michael P. Doyle More information about this series at http://www.springer.com/series/7131 Food Microbiology and Food Safety Series The Food Microbiology and Food Safety series is published in conjunction with the International Association for Food Protection, a non-profit association for food safety professionals. Dedicated to the life-long educational needs of its Members, IAFP provides an information network through its two scientific journals (Food Protection Trends and Journal of Food Protection), its educational Annual Meeting, international meetings and symposia, and interaction between food safety professionals. Series Editor Michael P. Doyle, Regents Professor and Director of the Center for Food Safety, University of Georgia, Griffith, GA, USA Editorial Board Francis F. Busta, Director, National Center for Food Protection and Defense, University of Minnesota, Minneapolis, MN, USA Patricia Desmarchelier, Food Safety Consultant, Brisbane, Australia Jeffrey Farber, Food Science, University of Guelph, ON, Canada David Golden, Professor of Microbiology, Department of Food Science and Technology, University of Tennessee, Knoxville, TN, USA Vijay Juneja, Supervisory Lead Scientist, USDA-ARS, Philadelphia, PA, USA Manpreet Singh, Department of Food Sciences, Purdue University, West Lafayette, IN, USA Ruth Petran, Vice President of Food Safety and Pubic Health, Ecolab, Eagan, MN, USA Elliot Ryser, Department of Food Science and Human Nutrition, Michigan State University, East Lansing, MI, USA Joshua B. Gurtler • Michael P. Doyle Jeffrey L. Kornacki Editors Foodborne Pathogens Virulence Factors and Host Susceptibility Editors Joshua B. Gurtler Michael P. Doyle U. S. Department of Agriculture University of Georgia Agricultural Research Service Center of Food Safety Eastern Regional Research Griffin, GA, USA Wyndmoor, PA, USA Jeffrey L. Kornacki Kornacki Microbiology Solutions, Inc. Madison, WI, USA Food Microbiology and Food Safety ISBN 978-3-319-56834-8 ISBN 978-3-319-56836-2 (eBook) DOI 10.1007/978-3-319-56836-2 Library of Congress Control Number: 2017943344 © Springer International Publishing AG 2017 This work is subject to copyright. All rights are reserved by the Publisher, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilms or in any other physical way, and transmission or information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed. The use of general descriptive names, registered names, trademarks, service marks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. The publisher, the authors and the editors are safe to assume that the advice and information in this book are believed to be true and accurate at the date of publication. Neither the publisher nor the authors or the editors give a warranty, express or implied, with respect to the material contained herein or for any errors or omissions that may have been made. The publisher remains neutral with regard to jurisdictional claims in published maps and institutional affiliations. Printed on acid-free paper This Springer imprint is published by Springer Nature The registered company is Springer International Publishing AG The registered company address is: Gewerbestrasse 11, 6330 Cham, Switzerland Contents Part I Foodborne Pathogens and Virulence Factors Advantages of Virulotyping Pathogens Over Traditional Identification and Characterization Methods ....................... 3 Joshua B. Gurtler, Michael P. Doyle, Jeffrey L. Kornacki, Pina M. Fratamico, Andrew G. Gehring, and George C. Paoli Varying Pathogenicity of Campylobacter jejuni Isolates ............... 41 Omar A. Oyarzabal and Steffen Backert Strain-Specific Virulence Differences in Listeria monocytogenes: Current Perspectives in Addressing an Old and Vexing Issue .......... 61 Sophia Kathariou, Peter Evans, and Vikrant Dutta The Listeria monocytogenes Triad for Success: Food Matrix, Stress Response and Virulence ........................ 93 Maria Leonor Faleiro Virulence Traits in the Cronobacter Genus .......................... 123 F.S. Almajed and S. Forsythe Factors Affecting Variation in Salmonella Virulence .................. 151 John J. Maurer Shigella: Virulence Factors and Pathogenicity ....................... 169 Kimberly A. Bliven and Keith A. Lampel Alterations in Shiga Toxin-Producing E. coli Colonization and Virulence Following Dietary Modulation and Administration of Antimicrobials ............................. 209 Cheleste M. Thorpe The Role of Alternative Sigma Factors in Pathogen Virulence ......... 229 Mark Roberts, Gary Rowley, Jan Kormanec, and Maria Elisabeth Johanna Zalm v vi Contents The Effects of Environmental Conditions and External Treatments on Virulence of Foodborne Pathogens ............................. 305 Kumar Venkitanarayanan, Abhinav Upadhyay, Meera Surendran Nair, and Indu Upadhyaya The Rise of Genomics and the Promise of Whole Genome Sequencing for Understanding Microbial Foodborne Pathogens .................. 333 Eric W. Brown, Narjol Gonzalez-Escalona, Robert Stones, Ruth Timme, and Marc W. Allard Part II Foodborne Pathogens, Host Susceptibility, and Infectious Dose Host Innate Immune Factors Influencing Enterohemorrhagic Escherichia coli Pathogenicity .................................... 355 Ying Zhang, Jaclyn S. Pearson, and Elizabeth L. Hartland In Defense of the European 100 CFU of Listeria monocytogenes/g in Ready-to-Eat Foods .......................................... 375 Phil Voysey and Roy Betts Science to Support the Prevention of Listeria monocytogenes in Ready-to-Eat Foods .......................................... 393 Janell R. Kause, Daniel L. Gallagher, and Daniel L. Engeljohn Variability in Human Host Susceptibility to Listeria monocytogenes Infections ............................... 419 Rahat Wadhwa Desai and Mary Alice Smith Infectious Dose and an Aging Population: Susceptibility of the Aged to Foodborne Pathogens. . . . . . . . . . . . . . . . . . . 451 James L. Smith The Effects of Food Composition on Foodborne Illness Infectious Dose and Host Susceptibility ............................ 469 Monica A. Ponder Foodborne Pathogens and Host Predilection ........................ 495 David C. Bean and Laurie S. Post The Influence of Virulence Factors on Dose Response of Food-Borne Pathogens ........................................ 531 Diane G. Newell, Georgina Manning, Martin Goldberg, David Morgan, and Trudy M. Wassenaar Clostridium botulinum and the Most Poisonous Poison ................ 553 Eric A. Johnson Mitigation of Foodborne Illnesses by Probiotics ..................... 603 Valerie Ryan and Arun K. Bhunia Index . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 635 Virulence Book Introduction Food recalls in the United States are increasing, in part because of the increased sophistication of the country’s foodborne disease surveillance system through the application of whole genome sequencing (WGS). Other countries are adopting this approach as well. Applying WGS to Listeria surveillance has increased the detec- tion of outbreaks in the United States by 3.3-fold, and the median number of Listeria cases in an outbreak has decreased from 68 in the mid-1990s to 3 presently. There are about 625 times more estimated cases of salmonellosis (ca. 1 million) in the United States than listeriosis (1600). When WGS is fully implemented in salmonel- losis outbreak detection, there is likely to be a considerable increase in the recogni- tion and traceback of salmonellosis outbreaks annually. In 2017, WGS is anticipated to expand to other foodborne pathogens, which will likely lead to many new revela- tions about the sources of pathogens in our food supply and many food producers and processors will likely be adversely affected. The economic consequence is likely to be substantial. With this revolutionary advancement in foodborne disease outbreak detection, it will be critical that all sectors of the food industry have world-class food safety systems in place and that robust methods are available for the detection and identi- fication of pathogens in foods and food manufacturing facilities. This book addresses this latter point, in hopes that soon regulatory surveillance and policies regarding foodborne pathogens will be based upon the virulence of microbes rather than sim- ply classifying entire groups of potential pathogens as harmful. Further, all members of a particular bacterial genus (e.g., Salmonella, Campylobacter) or members of an individual bacterial species (e.g., Listeria mono- cytogenes, Cronobacter sakazakii) are often treated by public health and regulatory agencies as being equally pathogenic; however, this is not necessarily true and is an overly conservative approach to ensuring the safety of foods. Even within a species, virulence factors vary to the point that some isolates may be highly virulent, whereas others may rarely, if ever, cause disease in humans. Hence, many food safety scien- tists have concluded that a more appropriate characterization of bacterial isolates for public health purposes could be that of typing food-associated bacteria on the basis of their virulence factors. This concept can be addressed in a number of different vii viii Virulence Book Introduction ways by examining the virulence factors of foodborne pathogens and their impact on the human host based on various intrinsic and extrinsic factors. This book is divided into two sections. Part I, Foodborne Pathogens and Virulence Factors, focuses on specific virulence factors of foodborne pathogens and the role they play in regulatory requirements, recalls, and foodborne illness. The variability in virulence between strains of Listeria monocytogenes, Salmonella, Campylobacter, Shigella, and others will be addressed. This section will also exam- ine known factors capable of enhancing virulence in foodborne pathogens. Part II, Foodborne Pathogens, Host Susceptibility, and Infectious Dose, is self-described and will address the ability of a pathogen to invade a human host, based on numer- ous exogenous factors relative to the pathogen and the environment. Some of these factors include host age, immune status, genetic composition, infectious dose, food composition, and probiotics. Readers of this book will develop a better understand- ing of foodborne bacterial pathogen virulence factors, pathogenicity, and host fac- tors that influence the severity of disease in humans. Part I Foodborne Pathogens and Virulence Factors

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