Methods in Molecular Biology 1817 Mario Baratta Editor Epithelial Cell Culture Methods and Protocols M M B ethods in olecular iology Series Editor: John M. Walker School of Life and Medical Sciences University of Hertfordshire Hatfield, Hertfordshire, AL10 9AB, UK For further volumes: http://www.springer.com/series/7651 Epithelial Cell Culture Methods and Protocols Edited by Mario Baratta Department of Veterinary Science, University of Turin, Turin, Italy Editor Mario Baratta Department of Veterinary Science University of Turin Turin, Italy ISSN 1064-3745 ISSN 1940-6029 (electronic) Methods in Molecular Biology ISBN 978-1-4939-8599-9 ISBN 978-1-4939-8600-2 (eBook) https://doi.org/10.1007/978-1-4939-8600-2 Library of Congress Control Number: 2018946598 © Springer Science+Business Media, LLC, part of Springer Nature 2018 This work is subject to copyright. All rights are reserved by the Publisher, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilms or in any other physical way, and transmission or information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed. The use of general descriptive names, registered names, trademarks, service marks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. The publisher, the authors and the editors are safe to assume that the advice and information in this book are believed to be true and accurate at the date of publication. Neither the publisher nor the authors or the editors give a warranty, express or implied, with respect to the material contained herein or for any errors or omissions that may have been made. The publisher remains neutral with regard to jurisdictional claims in published maps and institutional affiliations. Printed on acid-free paper This Humana Press imprint is published by the registered company Springer Science+Business Media, LLC part of Springer Nature. The registered company address is: 233 Spring Street, New York, NY 10013, U.S.A. About the Editor Mario Baratta is full professor of veterinary physiology at the University of Turin (IT). He received his master’s degree in veterinary medicine at the University of Parma (IT) and his PhD in neuroendocrinology of animal farm at the University of Bologna (IT). Today he is the coordinator of the Graduate School program in Veterinary Science for Animal Health and Food Safety, University of Turin. His main interests are the biology of adult stem cells in different tissues, and he has developed specific knowledge in functional assessment sys- tems of epithelial cells and cell differentiation in mammary gland and in muscle in animal science. v Preface Epithelial tissues line the cavities and surfaces of blood vessels and organs throughout the body, and epithelial cells exert a fundamental role for absorption or secretion or to act as a barrier. They are characterized by common structural features, especially their arrangement into cohesive sheets, but have diverse functions made possible by many specialized adapta- tions. Many of the physical properties of epithelial cells rely on their attachment to each other, which is mediated by several types of cell junctions. The specialized functions of epithelial cells are mediated both through structural modifications of their surface and by internal modifications, which adapt cells to manufacture and secrete a product. Thus, many aspects of cellular regulation of different organs are mediated by these cells, and its under- standing is very important for defining the therapeutic approach in dysregulation. Further, epithelial cell markers can be used to investigate many aspects of epithelial cell biology including embryonic development, tissue organization, carcinogenesis, and epithelial-to- mesenchymal transition status. In the understanding of the cellular physiology of these particular cell types, the analysis in a three-dimensional environment in which the cellular polarity is respected is increasingly important. This book aims to provide a broad overview of the systems and the epithelial cell cul- ture techniques used in recent years in several animal models. Particular attention was paid to systems that seek to mimic the three-dimensional organization or a paracrine relation- ship between the different most physiological cell types. This aspect is considered of par- ticular importance in the effort to refine the most adequate solutions for the reduction of in vivo experiments and collect more data compatible with the physiological regulations in various biological systems. In particular, the three-dimensional culture permits to investigate deeply these cells since they are uniquely positioned at the interface where self and non-self meet. In the lung, epi- thelial cells must separate the airways, and potential harmful materials within them, from the bloodstream while allowing the free diffusion of oxygen and carbon dioxide. The gastroin- testinal tract is an even more challenging environment, for in addition to preventing luminal toxins, microbiota, and microbial products from accessing deeper tissues, the intestinal epi- thelium must support vectorial, or directional, transport of nutrients, ions, and water. This book has included the protocols of analysis of epithelial cells from different organs such as lung (Chapter 4), different parts of gastrointestinal system (Chapters 5, 11–13, 15–18), thyroid (Chapters 1, 2), salivary gland (Chapter 3), ovary (Chapters 8–10), and mammary gland (Chapters 14, 17). The collection has inserted also some protocols of cul- tivation of some cell types that from an embryogenic point of view are object of study for their epithelial derivation as the granulosa cells of which, however, recent studies have pro- posed a common derivation with the ovarian surface epithelial cells from a precursor cell called gonadal-ridge epithelial-like cell. Since their applicative importance is undoubted in the understanding of the reproductive regulations in both human and animal fields, differ- ent approaches for their manipulation are proposed. For the same reason, a chapter on amniotic epithelial cell has been included (Chapter 7). A specific chapter has been dedicated vii viii Preface to the olfactory epithelial tissue for the interesting role that this model plays in the study of neurogenesis (Chapter 19). Another aspect that the edition would like to propose is the translational aspect of research that uses these study models. In fact, the study of epithelial cells in vitro attracts researchers engaged in different scientific areas of life sciences and how these different skills can integrate and enrich each other. The contributions of experimental models come from laboratories actively engaged in research in very recent years. For this reason, the book aims to be a very updated review of the culture methods applied to epithelial cells in functional studies. I hope that this edition will be of particular interest among young researchers who are involved in the study and use of cell culture techniques in epithelial cell physiology where in vitro techniques are increasingly considered for the replacement of experimental approaches in vivo. Turin, Italy Mario Baratta Contents About the Editor � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � v Preface � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � � vii Contributors ���������������������������������������������������������� � xi 1 Normal Human Thyrocytes in Culture. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1 Sarah J. Morgan, Susanne Neumann, and Marvin C. Gershengorn 2 Isolation and Culture of Juvenile Pig Thyroid Follicular Epithelia. . . . . . . . . . . 9 James D. Lillich and Peying Fong 3 Reassembly of Functional Human Stem/Progenitor Cells in 3D Culture . . . . . 19 Danielle Wu, Patricia Chapela, and Mary C. Farach-Carson 4 Culture and Differentiation of Lung Bronchiolar Epithelial Cells In Vitro . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 33 Dahai Zheng and Jianzhu Chen 5 Differentiation of Gastrointestinal Cell Lines by Culture in Semi-wet Interface . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 41 Macarena P. Quintana-Hayashi and Sara K. Lindén 6 Three-Dimensional Cell Culture Model Utilization in Renal Carcinoma Cancer Stem Cell Research. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 47 Kamila Maliszewska-Olejniczak, Klaudia K. Brodaczewska, Zofia F. Bielecka, and Anna M. Czarnecka 7 Amniotic Epithelial Cell Culture. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 67 Angelo Canciello, Luana Greco, Valentina Russo, and Barbara Barboni 8 Bovine Granulosa Cell Culture. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 79 Bushra T. Mohammed and F. Xavier Donadeu 9 Bioencapsulation of Oocytes and Granulosa Cells . . . . . . . . . . . . . . . . . . . . . . . 89 Massimo Faustini, Giulio Curone, Maria L. Torre, and Daniele Vigo 10 Ovine Granulosa Cells Isolation and Culture to Improve Oocyte Quality . . . . . 95 Giovanni Giuseppe Leoni and Salvatore Naitana 11 3D Model Replicating the Intestinal Function to Evaluate Drug Permeability . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 107 Inês Pereira, Anna Lechanteur, and Bruno Sarmento 12 Isolation of Human Gastric Epithelial Cells from Gastric Surgical Tissue and Gastric Biopsies for Primary Culture . . . . . . . . . . . . . . . . . . . . . . . . 115 Jinhua Qin and Xuetao Pei 13 Long-Term Culture of Intestinal Organoids . . . . . . . . . . . . . . . . . . . . . . . . . . . 123 Seung Bum Lee, Sung-Hoon Han, and Sunhoo Park ix x Contents 14 Bovine Mammary Organoids: A Model to Study Epithelial Mammary Cells . . . 137 Eugenio Martignani, Paolo Accornero, Silvia Miretti, and Mario Baratta 15 Establishment of Human- and Mouse-Derived Gastric Primary Epithelial Cell Monolayers from Organoids. . . . . . . . . . . . . . . . . . . . . . . . . . . . 145 Emma Teal, Nina Bertaux-Skeirik, Jayati Chakrabarti, Loryn Holokai, and Yana Zavros 16 Mouse-Derived Gastric Organoid and Immune Cell Co-culture for the Study of the Tumor Microenvironment. . . . . . . . . . . . . . . . . . . . . . . . . 157 Jayati Chakrabarti, Loryn Holokai, LiJyun Syu, Nina Steele, Julie Chang, Andrzej Dlugosz, and Yana Zavros 17 Murine and Human Mammary Cancer Cell Lines: Functional Tests . . . . . . . . . 169 Paolo Accornero, Eugenio Martignani, Silvia Miretti, and Mario Baratta 18 In Vitro Porcine Colon Culture . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 185 Matheus O. Costa, Janet E. Hill, Michael K. Dame, and John C. S. Harding 19 Primary Cultures of Olfactory Neurons from the Avian Olfactory Epithelium . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 197 George Gomez Index. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 209 Contributors Paolo accornero • Department of Veterinary Science, University of Turin, Grugliasco, TO, Italy Mario Baratta • Department of Veterinary Science, University of Turin, Grugliasco, TO, Italy BarBara BarBoni • Faculty of Bioscience and Technology for Food, Agriculture and Environment, University of Teramo, Teramo, Italy nina Bertaux-Skeirik • Department of Pharmacology and Systems Physiology, University of Cincinnati, Cincinnati, OH, USA Zofia f. Bielecka • Department of Oncology with Laboratory of Molecular Oncology, Military Institute of Medicine, Warsaw, Poland; School of Molecular Medicine, Warsaw Medical University, Warsaw, Poland klaudia k. BrodacZewSka • Department of Oncology with Laboratory of Molecular Oncology, Military Institute of Medicine, Warsaw, Poland angelo canciello • Faculty of Bioscience and Technology for Food, Agriculture and Environment, University of Teramo, Teramo, Italy Jayati chakraBarti • Department of Pharmacology and Systems Physiology, University of Cincinnati, Cincinnati, OH, USA Julie chang • Department of Biomedical Engineering, University of Cincinnati, Cincinnati, OH, USA Patricia chaPela • Department of Diagnostic and Biomedical Sciences, School of Dentistry, University of Texas Health Science Center at Houston, Houston, TX, USA; Department of BioSciences, Rice University, Houston, TX, USA JianZhu chen • Interdisciplinary Research Group in Infectious Diseases, Singapore- Massachusetts Institute of Technology Alliance for Research and Technology, Singapore, Singapore; The Koch Institute for Integrative Cancer Research and Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA MatheuS o. coSta • Department of Large Animal Clinical Sciences, Western College of Veterinary Medicine, University of Saskatchewan, Saskatoon, SK, Canada; Department of Farm Animal Health, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands giulio curone • Dipartimento di Medicina Veterinaria, Università degli Studi di Milano, Milan, Italy anna M. cZarnecka • Department of Oncology with Laboratory of Molecular Oncology, Military Institute of Medicine, Warsaw, Poland Michael k. daMe • Division of Gastroenterology, Department of Internal Medicine, University of Michigan Medical School, University of Michigan, Ann Arbor, MI, USA andrZeJ dlugoSZ • Department of Dermatology, University of Michigan, Ann Arbor, MI, USA; Department of Cell and Developmental Biology, University of Michigan, Ann Arbor, MI, USA xi