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Coral Reefs of Australia Perspectives from Beyond the Water’s Edge Editors: Sarah M. Hamylton, Pat Hutchings and Ove Hoegh-Guldberg Coral Reefs of Australia Perspectives from Beyond the Water’s Edge Editors: Sarah M. Hamylton, Pat Hutchings and Ove Hoegh-Guldberg This book is dedicated to A ustralia’s reefs and the people who live with them. Copyright The Authors 2022. All rights reserved. conducts these activities autonomously from the research activities of the Commonwealth Scientific and Industrial Except under the conditions described in the Australian Research Organisation (CSIRO). The views expressed in Copyright Act 1968 and subsequent amendments, no part of this publication are those of the author(s) and do not this publication may be reproduced, stored in a retrieval necessarily represent those of, and should not be system or transmitted in any form or by any means, attributed to, the publisher or CSIRO. The copyright owner electronic, mechanical, photocopying, recording, shall not be liable for technical or other errors or omissions duplicating or otherwise, without the prior permission of contained herein. The reader/user accepts all risks and the copyright owner. Contact CSIRO Publishing for all responsibility for losses, damages, costs and other permission requests. consequences resulting directly or indirectly from using this information. The authors assert their right to be known as the authors of this work. CSIRO acknowledges the Traditional Owners of the lands that we live and work on across Australia and pays A catalogue record for this book is available from the its respect to Elders past and present. CSIRO recognises National Library of Australia. that Aboriginal and Torres Strait Islander peoples have made and will continue to make extraordinary ISBN: 9781486315482 (pbk) contributions to all aspects of Australian life including ISBN: 9781486315499 (epdf) culture, economy, and science. CSIRO is committed to ISBN: 9781486315505 (epub) reconciliation and demonstrating respect for Indigenous How to cite: knowledge and science. The use of Western science in Hamylton SM, Hutchings P, Hoegh-Guldberg O (Eds) this publication should not be interpreted as (2022) Coral Reefs of A ustralia: Perspectives from Beyond the diminishing the knowledge of plants, animals and Water’s Edge. CSIRO Publishing, Melbourne. environment from Indigenous ecological knowledge systems. Published by: The views expressed in this publication are those of the CSIRO Publishing independent author(s) and do not necessarily represent Private Bag 10 those of, and should not be attributed to, the Australian Clayton South VIC 3169 Coral Reef Society or the lead editors. Australia This publication has been supported by the Australian Telephone: +61 3 9545 8400 Coral Reef Society and the Australian Academy of Email: [email protected] Sciences. Website: www.publish.csiro.au Sign up to our email alerts: publish.csiro.au/earlyalert Front cover: The reef at Lord Howe Island (image credit: Matthew Curnock) Back cover: Watson Island, Great Barrier Reef (image credit: Sarah Hamylton) Edited by Joy Window (Living Language) Cover design by Cath Pirret Typeset by Envisage Information Technology Index by Bruce Gillespie The paper this book is printed on is in accordance with the Printed in China by Leo Paper Products Ltd standards of the Forest Stewardship Council® and other controlled material. The FSC® promotes environmentally CSIRO Publishing publishes and distributes scientific, responsible, socially beneficial and economically viable technical and health science books, magazines and management of the world’s forests. journals from Australia to a worldwide audience and Jul22_01 FOREWORD Sylvia A. Earle For thousands of years, the warm waters along observed along Australia’s eastern coast and Australia’s coasts have gleamed with the rainbow beyond in the Coral Sea in the 1970s and 1980s have hues of healthy coral reef systems, home to hun- been largely transformed into ghost reefs, where dreds of kinds of corals, anemones, jellyfish, echi- far fewer sharks, grouper, snappers, lobsters and noderms, algae and seabirds, thousands of species even parrotfish swim among hauntingly pale of sponges and molluscs, two dozen kinds of rep- branches and mounds of coral. tiles, more than a hundred kinds of sharks, at least Armed with evidence gathered by thousands of 1500 bony fish species, 30 kinds of mammals and scientists recording data from spacecraft and satel- members of more than 30 other of the major catego- lites high in the sky, submersibles and instruments ries of life, including myriad microbes. In the 21st deployed deep within the sea, and measurements century, one kind of mammal – Homo sapiens – and observations in and across the globe, it is clear looms large as both an agent of unprecedented that humans are, indeed, changing the nature of destruction and as the best hope for an enduring nature. Their behaviours are warming the Earth, future for these ancient metropolises of life. diminishing the abundance and diversity of life As a young scientist in the 1950s, I was led to and changing planetary chemistry. In a few dec- believe that the ocean was a realm apart from life ades, human actions are unravelling the basic living on the land, a mysterious space so vast that nothing systems that have shaped Earth‘s rocks and water humans do could alter its nature and that no one into an oasis of life, a mostly blue miracle in an oth- could really predict, let alone change, the weather, erwise inhospitable universe. Our life support sys- the climate, the chemistry – or the composition of tems are in trouble, and therefore, so are we. life on Earth. But around the world, rapid loss of The good news is that it is not too late to reverse terrestrial wildlife and wild places had inspired much of the harm and turn from decline to recov- nations to protect special places as parks and ery. Nature-based solutions that protect and restore reserves. By the 1970s, concerns were growing wildlife and wild places are achieving results, with about signs of ocean decline, and in 1975 Australia more than 70 nations pledging to protect at least 30 responded by establishing the Great Barrier Reef per cent of the land and sea by 2030. In this thought- Marine Park Authority in an effort to safeguard the ful, authoritative, magnificently illustrated volume, health of that treasured region. the authors share their insights not only about the Throughout decades of exploration on, around wondrous nature of Australia’s legendary coral and under the ocean I have witnessed the most reefs, but also about actions that inspire hope for a profound time of discovery -- and the greatest era long and prosperous future for them and for all of of loss – in all of human history. The coral reefs I life on Earth, humans very much included. iii CONTENTS Foreword iii Acknowledgements vii Preface viii Author affiliations ix Abbreviations xii Cultural sensitivity warning xiii 1 A ustralia’s coral reefs 1 Coral reefs around A ustralia 2 The coral reefs of Western Australia 4 The isolated reefs of Australia’s north-west shelf 8 Kimberley corals exposed 11 The Cocos (Keeling) Islands 15 Christmas Island 18 Torres Strait 23 Coral Sea 28 Lord Howe Island 34 The Great Barrier Reef 39 Under the bunggu: the inspiration of sea country 44 References 45 2 Living with Australia’s coral reefs 49 Changing perceptions of Australia’s coral reefs 50 Three coral reefs in Yanyuwa country, meaningful and powerful 53 Encountering and charting the hazardous reefs of A ustralia, 1622–1864 57 Frank Hurley’s aquarium and the art of coral reef science 60 Coral reefs of Zenadth Kes (Torres Strait) 64 Saving A ustralia’s reefs: how much are they worth to us? 67 Bêche-de-mer: the cornerstone of A ustralian fisheries 70 Western rock lobster and the Houtman Abrolhos Islands 73 Coral reef tourism 79 References 86 3 The evolution of science on the Great Barrier Reef 91 The Great Barrier Reef Expedition of 1928–29 92 Revisiting the corals of the Low Isles 90 years later 98 The 1973 expedition to the northern Great Barrier Reef 99 Determining the age of the Great Barrier Reef: a voyage of discovery 104 iv ConTEnTS v The Australian Museum’s quest for a research station 107 Early coral reef science at Heron and one Tree islands 109 A network of research stations: advancing reef science under global change 114 References 119 4 Understanding the fundamentals of coral reefs 123 Scientific drilling on the Great Barrier Reef: unlocking the history of the reef 124 Australia’s reef islands 130 Tropical cyclones and A ustralia’s coral reefs 134 Marginal reefs: distinct ecosystems of extraordinarily high conservation value 139 The basics of coral biology 143 The importance of reproduction and connectivity in reef renewal 148 Coral reef ecology 151 Sex, baby fish, connectivity and recruitment to reefs 157 The sharks, rays, whales and dugongs of A ustralia’s coral reefs 163 Sea snakes: a unique group of marine reptiles 166 References 169 5 Managing Australia’s coral reefs 175 The Great Barrier Reef as a cultural landscape: continuing our connection through the eyes of a Traditional owner ranger 176 The connectedness of reefs, whales and people: a Yuin teaching 179 Management based on a sound understanding of the Great Barrier Reef 182 Filling in the pieces of the crown-of-thorns starfish puzzle 186 Water quality 189 Impacts and opportunities for floodplain wetlands on the Great Barrier Reef 192 Zoning the Great Barrier Reef 196 Mapping A ustralia’s coral reefs 200 Citizen science for managing Queensland’s coral reef habitats 205 Monitoring coral reefs at the Australian Institute of Marine Science 208 The use of advanced technology for monitoring coral reefs 210 References 212 6 Scientists as advocates for Australia’s coral reefs 217 A hundred years of the Australian Coral Reef Society 218 Australia’s role in international coral reef science and management 229 The influence of A ustralian coral reef science and management: an Indonesian perspective 231 References 234 7 Conservation and protection of  Australia’s coral reefs 237 The Bingil Bay Bastard: John Busst and the making of the Great Barrier Reef Marine Park 238 A cultural shift towards environmental protection 242 Saving ningaloo. Again 244 vi CORAL REEFS OF AUSTRALIA The story of the Coral Sea Marine Park: science, policy and advocacy 251 Australian coral reefs on the World Heritage list 256 The UnESCo List of World Heritage in Danger: a lever for reform 259 The politics governing survival for the Great Barrier Reef 261 References 263 8 A changing climate for A ustralian reefs 267 Climate change and A ustralia’s coral reefs 268 Responses of coral assemblages to recurrent mass bleaching 271 Coral reefs on the move? 276 Historical degradation and shifting baselines on Australian coral reefs 279 Predicting coral reef futures 281 Adapting for A ustralia’s reefs of tomorrow: the complex landscape of reef restoration and interventions 287 Reef rehabilitation and restoration 288 Harvesting coral spawn slicks for reef restoration 289 Enhancing corals using assisted evolution 291 natural extreme reefs as potential coral resilience hotspots 296 Science meets the public, policy and management practitioners 297 The Intergovernmental Panel on Climate Change (IPCC) 301 Advancing Australian reef governance into the Anthropocene: the Great Barrier Reef at the next frontier 303 References 307 Epilogue: The eye of the beholder 315 Reference 317 Index 318 ACKNOWLEDGEMENTS This book has been curated to mark the Hundred science and management projects over the past Year Anniversary of the Australian Coral Reef century of coral reef science cannot be comprehen- Society and the council and members are thanked sively described. for their support and contributions. The efforts of several people in searching out The text has benefited from the insights of sev- archival information and images are much appreci- eral expert chapter reviewers, including Professor ated: Professor Tom Spencer and Professor B arbara Maria Byrne, Dr Michelle Dyer (GBRMPA), Dr Brown at the Natural History Museum, Royal Soci- Zena Dinesen, Catheline Froehlich, Dr Saskia Jur- ety and Royal Geographical Society in London, riaans (AIMS), Professor Richard Kenchington, Joanna Ruxton at the Great Barrier Reef Marine Brett Lewis, Professor David Suggett, Dr Gergely Park Authority, Trisha Fielding at the James Cook Torda, and Professor Colin Woodroffe. University Library, Jack Ennis Butler at the National We would like to thank the Australian Academy Library of A ustralia, Patricia Egan at the A ustralian of Sciences for providing financial support through Museum, Joy Wheeler at the Royal Geographical their Regional Collaboration Programme towards Society and Dr Anne Hoggett at Lizard Island book research and publishing costs. The Regional Research Station. Collaborations Programme is supported by the Members of the A ustralian Coral Reef Society Australian Government under the National Inno- are thanked for supplying images throughout the vation and Science Agenda. We are also grateful for book. Matthew Curnock and Martin Colognoli the ongoing support of the Australian Research deserve a special mention for generously providing Council for coral reef science through their grant their spectacular photographs. Brett Lewis’s excel- programs and large initiatives such as the Centre lent graphic design suggestions were invaluable. for Excellence in Coral Reef Studies, which has Thank you to the following people for provid- been critically important to Australian coral reef ing the photograph at the start of each chapter: science. Similarly, many organisations like the Matthew Curnock (Chapters 1 and 8), Paul Jones Australian Institute of Marine Science, the Great (Chapter 2), Prithvi Bhattacharya (Chapters 3 and Barrier Reef Marine Park Authority and the Great 5), Brett Lewis (Chapter 4), Steph Gardner Barrier Reef Foundation have provided key input (Chapter 6), Julia Sumerling (Chapter 7). and financial support to broaden the research, edu- Our editors at CSIRO Publishing, Mark Hamil- cation and communication necessary to build solu- ton, Briana Melideo, Tracey Kudis and Joy Window, tions and a better future for A ustralia’s coral reefs are thanked for their sharp eyes, useful sugges- in a stable, zero carbon world. The long list of indi- tions and patient guidance in pulling the manu- viduals and organisations who have supported script together. vii PREFACE Sarah Hamylton, Pat Hutchings and Ove Hoegh-Guldberg Australia’s tropical coastline supports mangroves, instruments from boats, and making observations seagrass and coral reefs, runs for thousands of kilo- at field sites and in laboratories. Australian scien- metres and takes on distinct regional characteristics tists have gone beyond unlocking the geological as it crosses from the arid deserts of Western and biological secrets of reefs to occupy a broader Australia to the Wet Tropics of Queensland. No role as advocates, communicators and advisors, single person has dived the entire vastness of driven by their profound admiration for, and desire Australia’s coral reefs, many of which are seldom to protect reefs and their associated ecosystems. visited by humans. Only recently have many of What began for most as a passion is now deadly these reefs become accessible to visitors, tourists, serious. As local and global threats have multi- scientists and those seeking to make a living from plied, our understanding of coral reefs in the them. Anthropocene is more important than ever, with Coral reefs may be contingent on geology and humans directly changing planetary tempera- biology, but, as Iain McCalman writes in his book tures. Corals are now the ‘canary in the coalmine’ The Reef: A Passionate History, they are also products for the impacts of global climate change, having of human perception that have been imagined into suffered more frequent and intense mass coral existence down the millennia. In Australia, it is an bleaching and mortality, dramatic species range imaginative picture that extends back, uniquely, at shifts, ocean acidification, and more. Australia’s least 60 000 years. Aboriginal and Torres Strait coral reefs have sustained a global interest for cen- Islander A ustralians regard coral reefs as part of a turies and the diverse perspectives in this book sea country that incorporates all living people, ani- trace our evolving relationship with them, telling mals, plants, and creation spirits, about which sto- inspiring stories of scientific discovery and ocean ries have been told for many generations. More governance that have put Australia at the fore- recently, our perceptions of reefs have been shaped front of environmentally responsible coral reef by discovery and exploration. Reefs have trans- management. formed from mortal danger to natural mystery, Curating this collection has been an organic pro- from bountiful expanse of untapped resources to cess in which we included as many voices as possi- unique ecosystems worthy of protection. ble, although they inevitably encompass only a small As people have become increasingly familiar portion of all the people who interact with Australia’s with these seascapes, helped by aquaria, SCUBA reefs. Ideas and insights are presented in distinctive technology, books and documentaries, their curi- styles; they focus on different ways in which people osity has deepened about how such a wealth of interact with reefs and are sometimes contradictory. biodiversity thrives in remote and often low-nutri- We bring together different worldviews to empha- ent oceans. Much of this biodiversity remains sise the differences between perspectives, from undescribed. This book offers a range of perspec- industry to Indigenous, from mesophotic to mass tives on the relationship between coral reefs and spawning. It is the interplay between them that humans. It is a relationship shaped by hours spent offers a deeper understanding of what it means to floating above reefs, walking reef flats, dangling work with and live alongside A ustralia’s reefs. viii AUTHOR AFFILIATIONS Maria Fernanda Australian Rivers Institute, Griffith University, Brisbane, Qld Adame Robin Beaman College of Science and Engineering, James Cook University, Cairns, Qld Giglia A. Beretta School of Life Sciences, University of Technology, Sydney, nSW David J. Booth School of Life Sciences, University of Technology Sydney, nSW John Bradley Monash Indigenous Studies Centre, Monash University, Melbourne, Vic Barbara Brown School of natural & Environmental Sciences, University of newcastle upon Tyne, UK; Environmental Research Unit, University of the Highlands and Islands, Caithness, Scotland nicola Browne School of Molecular and Life Sciences, Curtin University, Bentley, WA Maria Byrne School of Life and Environmental Sciences, University of Sydney, Sydney, nSW Emma Camp Climate Change Cluster, University of Technology Sydney, Sydney, nSW Mel Cowlishaw Great Barrier Reef Marine Park Authority, Brisbane, Qld Graeme Cumming ARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Qld; A ustralian Coral Reef Society Council member Matthew I. CSIRo Land and Water, Townsville Qld Curnock Jon C. Day ARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Qld; formerly Great Barrier Reef Marine Park Authority, Townsville, Qld Christopher CSIRo oceans & Atmosphere, St Lucia, Qld Doropoulos Sophie Dove ARC Centre of Excellence for Coral Reef Studies and School of Biological Sciences at the University of Queensland, St Lucia, Qld Michelle Dyer Great Barrier Reef Marine Park Authority, Townsville, Qld; A ustralian Coral Reef Society Council member Michael J. Emslie Australian Institute of Marine Science, Townsville, Qld Gal Eyal ARC Centre of Excellence for Coral Reef Studies, School of Biological Sciences, University of Queensland, St Lucia, Qld; Mina and Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Israel Ann Elias Department of Art History, University of Sydney, Sydney, nSW Leanne Fernandes Senior Research Fellow, School of Marine Biology, College of Science and Engineering, James Cook University, Townsville, Qld Maoz Fine The Alexander Silberman Institute of Life Science, The Hebrew University of Jerusalem, Israel Catheline School of Earth, Atmospheric and Life Sciences, University of Wollongong, Wollongong, nSW; Froehlich Australian Coral Reef Society Council member James Gilmour Australian Institute of Marine Science, Indian ocean Marine Science Centre, University of Western Australia, Perth, WA; oceans Institute, University of Western Australia, Crawley, Western Australia, Australia Howard Gray Maritime historian, Batavia Coast, WA Jack Greenwood Department of Zoology, The University of Queensland (1961–2002) Valerie Hagger School of Biological Science, University of Queensland, St Lucia, Qld Sarah M. School of Earth, Atmospheric and Life Sciences, University of Wollongong, Wollongong, nSW; Hamylton President, Australian Coral Reef Society Melanie Hava Melanie Hava is a Mamu Aboriginal artist. Her mother is from the Dugul-barra and Warii-barra family groups of the Johnstone River catchment ix

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