Mrinal K. Bhattacharjee Chemistry of Antibiotics and Related Drugs Chemistry of Antibiotics and Related Drugs Mrinal K. Bhattacharjee Chemistry of Antibiotics and Related Drugs Mrinal K. Bhattacharjee Department of Chemistry and Biochemistry Long Island University Brooklyn , NY , USA ISBN 978-3-319-40744-9 ISBN 978-3-319-40746-3 (eBook) DOI 10.1007/978-3-319-40746-3 Library of Congress Control Number: 2016944926 © Springer International Publishing Switzerland 2016 T his work is subject to copyright. All rights are reserved by the Publisher, whether the whole or part of the material is concerned, specifi cally the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfi lms or in any other physical way, and transmission or information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed. The use of general descriptive names, registered names, trademarks, service marks, etc. in this publication does not imply, even in the absence of a specifi c statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. T he publisher, the authors and the editors are safe to assume that the advice and information in this book are believed to be true and accurate at the date of publication. Neither the publisher nor the authors or the editors give a warranty, express or implied, with respect to the material contained herein or for any errors or omissions that may have been made. Printed on acid-free paper This Springer imprint is published by Springer Nature The registered company is Springer International Publishing AG Switzerland This book is dedicated to my wife Nayana and daughter Neha Pref ace This book discusses the various classes of antibiotics and their mechanisms of action. Millions of lives have been saved by antibiotics since they were fi rst discovered about 90 years ago. For the fi rst few decades antibiotics had remarkable success. Encouraged by the remarkable success, in 1969 the then-US Surgeon General William Stewart testifi ed before Congress that it was “time to close the book on infectious disease.” Today, we know how premature that statement was. More than four decades later, infectious disease still remains the leading cause of death world- wide, and ranks among the top ten causes of death in the United States. The main reason is that bacteria are becoming increasingly resistant to antibiotics. Mechanisms by which bacteria develop resistance to antibiotics are also discussed here. T his book has been written with the student in mind. The main focus is to explain how antibiotics work in curing infectious diseases and how resistance develops to the antibiotics. A background in Biochemistry is needed to understand the mecha- nism of action of the antibiotics. However, any background information that is needed is discussed in the book. So, it will not be necessary for the student to con- sult any separate biochemistry textbook in order to understand the theory of antibi- otics. However, the discussion of biochemistry in this book is not meant to be complete. The only information presented is what is relevant to the understanding of antibiotics. There are many other important aspects of antibiotics that are studied by doctors, pharmacists, and scientists but are beyond the scope of this book. Some of these aspects are briefl y mentioned but will not be discussed in much detail. D osage, formulation, bioavailability, and biostability are important aspects for effective use of antibiotics. These ensure that the antibiotic will be delivered specifi - cally to diseased site in the right amount and for the required duration. Dose depends on how much of the antibiotic is absorbed from the digestive system, how stable it is, how much enters the cells, the distribution of the drug in various tissues, and many other factors. However, discussions of these aspects are beyond the scope of this book. vii viii Preface All antibiotics do not work for all infections. Antibiotics also have various side effects and may interact with other drugs to give unwanted effects. Information needed to decide which antibiotic to prescribe for which infection is beyond the scope of this book. A ll antibiotics will be referred to by their common names such as penicillin, tetracycline, and erythromycin even though many of these antibiotics have other brand names. There are also various derivatives with altered but similar activities for many of these antibiotics. Not all of these names are included in this book. All antibiotics will also have a systematic name based on IUPAC nomenclature of organic compounds. Those names will be mentioned for the simple molecules but not for those with complex structures. Brooklyn, NY, USA Mrinal K. Bhattacharjee Contents 1 Introduction to Antibiotics ....................................................................... 1 1.1 Defi nition of Antibiotics .................................................................... 1 1.2 History of Antibiotics ......................................................................... 3 1.3 The Ideal Antibiotic ........................................................................... 4 1.4 Sources of Antibiotics ........................................................................ 5 1.5 Discovery of Modern Antibiotics ....................................................... 6 1.6 Classifi cation of Antibiotics ............................................................... 10 1.7 Background Biochemistry Information ............................................. 12 1.7.1 Enzymes ................................................................................. 12 1.7.2 Enzyme Inhibitors .................................................................. 13 1.7.3 Enzyme Mechanisms ............................................................. 14 1.7.4 Metabolism and Metabolic Pathways .................................... 16 1.7.5 Thermodynamics of Metabolic Pathways .............................. 18 1.7.6 High Energy Compounds ....................................................... 19 1.7.7 Metabolically Irreversible and Near Equilibrium Reactions ................................................................................ 22 1.7.8 Membrane Transport .............................................................. 24 2 Development of Resistance to Antibiotics ............................................... 27 2.1 Antibiotics Are No Longer Considered to be Miracle Drugs ............ 27 2.2 Detection of Antibiotic Resistance ..................................................... 28 2.3 Classifi cation of Antibiotic Resistance .............................................. 29 2.4 Resistance Development by Point Mutations .................................... 29 2.5 Selection for Resistance ..................................................................... 31 2.6 Resistance Development by Resistance Gene Acquisition ................ 32 2.7 Mechanism of Antimicrobial Resistance ........................................... 36 2.8 Synthetic Antibiotics .......................................................................... 36 2.9 Alternative Approaches for Studying Antibiotics .............................. 39 ix
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