Biotechnology and Bioengineering 2004: Vol 86 Index

2004·3 MB·English

Biotechnology
Bioengineering
INDEX TO VOLUME 86
Biotechnology
Bioengineering
INDEX TO VOLUME 86
Biotechnology and Bioengineering
Author Index to Volume 86
Abdelmoez, W. See Bobe, I.M., 365 Bouchez, J.C. Cvetkovic, A.
Abdelmoez, W. ; Cornu, M.; Danzart, M.; Leveau, J.Y.; ; Straathof, A.J.J.: Hanlon, D.N.: van der
Abian, O. See Wilson, L., 558 Duchiron, F.; Bouix, M.: Physiological Zwaag, S.; Krishna, R.; van der Wielen,
Abramov, S. See Freeman, A., 196 Significance of the Cytometric L.A.M.: Quantifying Anisotropic Solute
Ahring, B.K. See Nielsen, H.B., 291 Distribution of Fluorescent Yeasts After lransport in Protein Crystals Using 3-D
Aizawa, M. See Manabe, M., 661 Viability Staining, 520 Laser Scanning Confocal Microscopy
Akesson, M. See Grotkjer, T., 209 Bouix, M. See Bouchez, J.C., 520 Visualization, 389
Akutsu, J.-i. Breur, M., see Rosche, B., 788 Dahlstrém, M.
: Tojo, Y.; Segawa, O.; Obata, K.; Okochi, Briels, W.J. See Schutyser, M.A.1., 405 : Jonsson, P.R.: Lausmaa, J.; Arnebrant, T.:
M.; Tajima, H.; Yohda, M.: Development Brocca, S. See Secundo, F., 236 SjOgren, M.; Holmberg, K.; Martensson,
of an Integrated Automation System with Broersen, K. L.G.E.; Elwing, H.: Impact of Polymer
a Magnetic Bead-Mediated Nucleic Acid ; Voragen, A.G.J.; Hamer, R.J.; de Jongh, Surtace Affinity of Novel Antifouling
Purification Device for Genetic Analysis H.H.J.: Glycoforms of {s-Lactoglobulin Agents, |
and Gene Manipulation, 667 With Improved Thermostability and Danzart, M. See Bouchez, J.C., 520
Al-Rubeai, M. Preserved Structural Packing, 78 Datar, R.P.
Alupoaei, C.E. Bryant, S.J. : Shenkman, R.M.: Cateni, B.G.:
: Garcia-Rubio, L.H.: Growth Behavior of ; Bender, R.J.; Durand, K.L.; Anseth, Huhnke, R.L.; Lewis, R.S
Microorganisms Using UV-Vis K.S.: Encapsulating Chondrocytes in Fermentation of Biomass
Spectroscopy Escherichia coli, 163 Degrading PEG Hydrogels With High Generated Producer Gas to
Alvarez, P.J.J. See Lovanh, N., 801 Modulus: Engineering Gel Structural Ethanol, 587
Anderson, M.M. See Gao, F.G., 425 Changes to Facilitate Cartilaginous de Jongh, H.H.J., See Broersen, K., 78
Andrews, B.A., See Oliver-Nappa, B.A., 573 Tissue Production, 747 De Maio, A.
Anseth, KS, see Bryant, SJ., 747 Bugos, R.C. See Paramban, R.1., 68 ; El-Masry, M.; Di Martino, S.:
Arnebrant, T.. See Dahlstrém, M., | Buque-Taboada, E.M. Rossi, S.: Bencivenga, |
Arnold, M.A., see Rhiel, M.H., 852 : Straathof, A.J.J.: Heijnen, J.J.: van det Grano, V.; Diano, N.; Canciglia, P.:
Asenjo, J.A.. See Oliver-Nappa., Wielen, L.A.M.: In Situ Product Removal Mita, D.G \ Novel Packed-Bed
B.A.,573 Using a Crystallization Loop in Bioreactor Operating Under
Atoche, J.C. Asymmetric Reduction of Isothermal and Non-Isothermal
: Moe, W.M.: Treatment of MEK and 4-Oxoisophorone by Saccharomyces Conditions, 308
Toluene Mixtures in Biofilters: Effect of cerevisiae, 795 Derksen, R.C. See Fife. J.P.. 96
Operating Strategy on Performance Cakir, T. Di Martino, S. See De Maio, A., 308
Durine Transient Loadine, 468 : Kirdar, B.; Ulgen, K.O.: Metabolic Diano, N. See De Maio, A., 308
Bapat, P.M. Pathway Analysis of Yeast Strengthens Dike, L.E.. see Guarino R.D, 775
; Wangikar, P.P.: Optimization of the Bridge Between Transcriptomics and Dionisi, D.
Rifamycin B Fermentation in Shake Metabolic Networks, 251 : Majone, M.; Miccheli, A.; Puccetti, C.:
Flasks Via a Machine-Learning-Based Canciglia, P. See De Maio, A., 308 Sinisi, C.: Glutamic Acid Removal
Approach, 201 Carlson, J.O. See Wickramasinghe and PHB Storage in the Activated
Bedzyk, L.A. See Ren, D., 344 S.R.. 612 Sludge Process Under Dynamic
Bencivenga, U. See De Maio, A., 308 Carlson, R. Conditions, 842
Bender, R.J.. see Bryant, SJ., 747 Srienc, | Fundamental Escherichia coli DiTonno, J.R., See Mikkilineni, V.. |
Bhattacharya, K.S. See Bhattacharya Biochemical Pathways for Biomass and Donner, P. See Cunha, A.E., 458
SE Energy Production: Creation of Overall Doran, P.M. See Boominathan, N.M., 243
Bhattacharya, S. Flux States, 149 Dormond, K.L, see Henry Bryant, O., 765
; Nayak, A.: Schiavone, M Carrea, G. See Secundo, F., 236 Douglas, P.L. See Skolpap. W.. 706
Bhattacharya S.K.: Solubilization and Carrondo, M.J.T. See Cunha, A.E., 458 Dror, Y. See Freeman. A., 196
Concentration of Carbon Dioxide: Novel Cateni, B.G. See Datar, R.P., 587 Duan, X. See King, M.. 512
Spray Reactors with Immobilized Chalmers, J.J. See Fife. J.P., 96 Duchiron, F. See Bouchez, J.C., 520
Carbonic Anhydrase, 37 Chang, T.MLS, see Yu. B., 835 Durand, K.L.. See Bryant S.J.. 747
Bobe, I.M. Christensen, B. See Grotkjzr, T.. 209 Duvetter, T. See Verlent, I... 63
\bdelmoez, W.; Ogino, H.: Yasuda, M.: Church, G.M.. See Mikkilineni, V.. 117 Edwards, J.S. See Mikkilineni, V., 117
Ishimi, K.; Ishikawa, H.: Kinetics and Clemente, J.J. See Cunha, A.E., 458 El-Masry, M. See De Maio, A., 308
Mechanism of a Reaction Catalyzed by Cohen, S. See Gerecht-Nir, S., 493 Elwing, H. See Dahlstr6m, M.. |
PST-O1 Protease from Pseudomonas Cohen, S. See Glicklis. R., 672 Erable, B.
aeruginosa PST-O1, 365 Cohen, M.B.. see Rhiel, M.H., 852 ; Goubet, I.; Lamare, S.; Legoy, M.D.;
Boeckx, P. See Wyffels, S., 53 Cohen-Hadar, N. See Freeman, A., 196 Maugard, T.: Haloalkane Hydrolysis
Boom, R.M. See Schutyser Cornu, M. See Bouchez, J.C.. 520 by Rhodococcus erythropolis Cells
M.A.I., 405 Cunha, A.EF. Comparison of Conventional
Boominathan, R. : Clemente, J.J.: Gomes R.: Pinto, I Aqueous Phase Dehalogenation
- Saha-Chaudhury, N.M.: Sahajwalla, V Thomaz, M.: Miranda, S.: Pinto, R and Nonconventional Gas Phase
Doran, P.M.: Production of Nickle Moosmayer, D.; Donner, P.; Carrondo Dehalogenation, 47
Bio-Ore From Hyperaccumulator M.J.T.: Methanol Induction Optimization Faber, K. See Kosjek. B.. 55
Plant Biomass: Applications in for scFv Antibody Fragment Production Facciotti, M.C.R. See Giudici. R.. 414
Phytomining, 243 in Pichia pastoris, 458 Fachin, D. See Peeters. L., 543
Biotechnology and Bioengineering. Vol. 86 865-869, (2004)
Feins, M. During Batch and Fed-Batch Cultivations Ignowski, J.M.
; Sirkar, K.K.: Highly Selective of Streptomyces olindensis, 414 : Schaffer, D.V.: Kinetic Analysis and
Membranes in Protein Ultrafiltration, 603 Glatz, C.E. See Menkhaus, T.J., 108 Modeling of Firefly Luciferase as a
Fernandez-Lafuente, R. See Wilson, L., 558 Glicklis, R. Quantitative Reporter Gene in Live
Fife, J.P. : Merchuk, J.C.; Cohen, S.: Mammalian Cells, 827
Derksen, R.C.; Ozkan, H.E.: Grewal, Modeling Mass Transfer in Hepatocyte Ijima, H. See Sakai, S., 168
P.S.: Chalmers, J.J.: Krause, C.R Spheroids via Cell Viability, Illanes, A. See Wilson, L., 558
Evaluation of a Contraction Flow Spheroid Size, and Hepatocellular Ishikawa, H. See Bobe, I.M., 365
Field on Hydrodynamic Damage to Functions, 672 Ishimi, K. See Bobe, I.M., 365
Entomopathogenic Nematodes Goessler, W. See Kosjek, B., 55 Ito, Y.
\ Biological Pest Control Gombert, A.K. See Grotkjzr, T ; Hasuda, H.: Immobilization of
\gent, 96 Gomes, R. See Cunha, A.E., 458 DNAzyme as a Thermostable
Forestell, S.P. See Yuk, 1.H.Y., 637 Goubet, I. See Erable. B., 47 Biocatalyst
Franzmann, P.D. See Kaksonen. Grano, V. See De Maio, A.. 308 Itskovitz-Eldor, J. See Gerecht-Nir, S., 493
A.H., 332 Grewal, P.S. See Fife. J.P., 96 Iversen, SILL. See van de Vondervoort.
Freeman, A. Grotkjer, T. PUL. 301
: Cohen-Hadar, N.: Abramov, S.: Akesson, M.; Christensen, B.: Gombert, Jan, E. See Viravaidya, K., 643
lodai-Hod, R.; Dror, Y.; Georgiou, G A.K.; Nielsen, J Impact of Jeevarajan, A.S. See Gao, F.G., 425
Screening of Large Protein Libraries by lransamination Reactions and Protein Jewett, M.C.
the “Cell Immobilized on Adsorbed Turnover on Labeling Dynamics in ; Swartz, J.R.: Mimicking the Escherichia
Bead” Approach, 196 C-Labeling Experiments, 209 coli Cytoplasmic Environment Activates
Fromion, V. See Malherbe, S.. 261 Gruno, M. | ong Lived and Efficient Cell-Free
Fujii, R. Viljamiie, P.: Pettersson, G.: Johansson Protein Synthesis, 19
; Morthara, F.; Oku, T., Hifumi, E.: Uda, G.: Inhibition of the Trichoderma reesei Johansson, G. See Gruno, M., 503
l.: Epitope Mapping and Features of Cellulases by Cellobiose Is Strongly Jonsson, P.R. See Dahlstrém, M.. |
the Epitope for Monoclonal Antibodies Dependent on the Nature of the Kaksonen, A.H.
Inhibiting Enzymatic Activity of Substrate, 503 ; Franzmann P.D.: Puhakka, J.A.: Effects
Helicobacter pylori Urease, 434 Guisan, J.M. See Wilson, L., 558 Retention Time and Sulfide
Fujii, R. Guarino, R.D. Toxicity mn Ethanol and Acetate
: Morihara, F.; Fukushima, K.; Oku, T ; Dike, L.E.; Haq, T.A.: Rowley, J.A.: Oxidation in Sulfate-Reducing Metal
Hifumi, E.; Uda, T.: Recombinant Pitner, J.B.: Timmins, M.R.: Method for Precipitating Fluidized-Bed Reactor, 332
Antigen from Helicobacter pylori Determining Oxygen Consumption Rates Kamen, A., See Henry, O., 765
Urease as Vaccine Against of Static Cultures From Microplate Kamiya, N. See Takazawa, T., 399
H pylori Associated Disease, 7 Measurements of Pericellular Dissolved Katsemi, V. See Lele, B.S., 628
Fujinami, H. See Mitsuda, Y.. 2 Oxygen Concentration, 775 Kawabata, K. See Sakai, S., 168
Fukushima, K., See Fujji, R.. 7 >4 = Hamer, R.J. See Broersen. K., 78 Kawakami, K. See Sakai, S.. 168
Fussenegger, M. See Fux, C., 174 Han, B. See Wickramasinghe. S.R., 612 Keller, J. See Wilén, B.-M., 445
Fux, C. Hanlon, D.N. See Cvetkovic, A.. 389 Kelm, J.M. See Fux, C., 174
; Langer, D.; Kelm, J.M.: Weber, W Haq, T.A., See Guarino, R.D 5 King, M.
Fussenegger, M New-Generation Hasuda, H. See Ito, Y..72 ; Duan, X.; Sheardown, H.: Partitioning
Multicistronic Expression Platform Hauer, B., See Rosche, B.. 788 of Model Toxins to Hydrophobically
prRIDENT Vectors Containing Heijnen, J.J. see Buque-Taboada, E.M.. 795 Terminated DAB Dendrimers, 512
Size-Optimized IRES Elements Enable Heijnen, J.J. See Martins, A.M.P., 125 Kirdar, B. See Cakir, T., 251
Homing Endonuclease-Based Cistron Hendrickx, M.E. See Verlent, 1.. 63 Klabunde, K.J. See Lele. B.S., 628
Swapping into Lentiviral Expression Hendrickx, M.E. See Peeters, L., 543 Kobatake, E. See Manabe, M.., 661
Vectors, 174 Henry, O. Kooy, F.K. See Malda, J.. 9
Gao, F.G. : Dormond, E.: Perrier. M.: Kamen, Kosjek, B.
; Jeevarajan, A.S.; Anderson, M.M Insights Into Adenoviral Vector : Stampfer, W Pogorevc, M.: Goesslet
Long-Term Continuous Monitoring Production Kinetics in Acoustic W.: Faber, K Kroutil, W
of Dissolved Oxygen in Cell Culture Filter-Based Perfusion Cultures, 765 Purificatior ind Characterization of a
Medium for Perfused Bioreactors Hifumi, E. See Fujii, R., 434 Chemotolerant Alcohol Dehydrogenase
Using Optical Oxygen Sensors, 425 Hifumi, E. See Fujii, R., 737 Applicable to Coupled Redox
Gapes, D. See Wilén, B.-M., 445 Hifumi, E. See Mitsuda, Y., 217 Reactions, 55
Garcia-Rubio, L.H. See Alupoaei, C.E., 163 Hilgert, N. See Malherbe, S., 261 Krause, C.R. See Fife. J.P., 96
Georgiou, G. See Freeman, A., 196 Heijnen, J.J.. See Buque-Taboada, E.M..795 Krech, A. See Menkhaus, T.J.. 108
Gerecht-Nir, S. Holmberg, K. See Dahlstr6m, M., | Krishna, R. See Cvetkovic, A., 389
; Cohen, S.; Itskovitz-Eldor, J.: Bioreactor Hong, S.-B. See Hughes, E.H., 718 Kroutil, W. See Kosjek. B.. 4 5
Cultivation Enhances the Efficiency of Huang, J. See Lai, Y.-P.. 622 Ladisch, M.R., See Mosier, N.S., 756
Human Embryoid Body (hEB) Formation Hubbell, J.A. See Pratt, A.B., 27 Lai, Y.-P.
and Differentiation, 493 Hughes, E.H. ; Huang, J.: Wang, L.-F ia J Wa, 2.
Gernaey, K.V. See Vanrolleghem, : Hong, S.-B.; Gibson, S.1.; Shanks, J.\ \ New Approach to Random Mutagene
P.A., 277 San, K Y Expression ta Feedback sis In Vitro, 622
Geyer, S. See Yuk, I.H.Y., 637 Resistant Anthranilate Synthase in Lamare, S. See Erable, B., 47
Gibson, S.I. See Hughes, E.H., 718 Catharanthus roseus Hairy Roots Langer, D. See Fux. C., 174
Giudici, R. Provides Evidence for light Lausmaa, J. See Dahlstr6m, M., |
; Pamboukian, C.R.D.; Facciotti, M.C.R Regulation ol Terpenoid Indole le Comte, E.P. See Malda, J., 9
Morphologically Structured Model for Alkaloid Levels, 718 Lee, S.Y., See Park, S.J.. 681
Antitumoral Retamycin Production Huhnke, R.L. See Datar, R.P.. 587 Legoy, M.D. See Erable, B., 47
AUTHOR INDEX
Lele, B.S. Mie, M. See Manabe, M., 661 Ozkan, H.E. See Fife, J.P., 96
; Papworth, G.; Katsemi, V.; Riiterjans, Mikkilineni, V. Palomo, J.M. See Mateo, C., 273
H.; Martyano, I.; Klabunde, K. J.; ; Mitra, R.D.; Merritt, J.; DiTonno, J.R.; Palonen, H.
Russell, A.J.: Enhancing Bioplastic Church G.M.; Ogunnaike, B.: Edwards, . Viikari, L.: Role of Oxidative Enzymatic
Substrate Interaction Via Pore Induction J.S.: Digital Quantitative Measurements Treatments on Enzymatic Hydrolysis of
and Directed Migration of Enzyme of Gene Expression, 117 Softwood, 550
Location, 628 Miranda, S. See Cunha, A.E., 458 Palsson, B.O. See Wiback, S.J., 317
Lens, P.N.L. See Vallero, M.V.G.,226 Mita, D.G. See De Maio, A., 308 Pamboukian, C.R.D. See Giudici, R., 414
Lettinga, G. See Vallero, M.V.G.,226 Mitra, R.D. See Mikkilineni, V., 117 Papworth, G. See Lele. B.S.. 628
Leveau, J.Y. See Bouchez, J.C., 520 Mitsuda, Y. Park, S.J.
Lewis, R.S. See Datar, R.P., 587 : Hifumi, E.; Tsuruhata, K.; Fujinami, H.: ; Lee, S.¥ New Fadb Homologous
Li, J. See Lai, Y.-P., 622 Yamamoto, N.; Uda, T.: Catalytic Anti- Enzymes and Their use in Enhanced
Lim, K..-i. body Light Chain Capable of Cleaving a Biosynthesis of Medium-Chain-Length
; Narayan, S.; Young, J.A.T.; Yin, J.: Chemokine Receptor CCR-5 Peptide Polyhydroxyalkanoates in fadB Mutant
Effects of Lipid Rafts on Dynamics of With a High Reaction Rate Constant, 217 Escherichia coli, 681
Retroviral Entry and Trafficking: Mladenovska, Z. See Nielsen, H.B., 291 Paramban, R.I.
Quantitative Analysis, 650 Modai-Hod, R. See Freeman, A., 196 ; Bugos, R.C.; Su, W.W.: Engineering
Lotti, M., See Secundo, F., 236 Moe, W.M. See Atoche, J.C., 468 Green Fluorescent Protein as a Dual
Lovanh, N. Moosmayer, D. See Cunha, A.E., 458 Functional Tag, 687
; Alvarez, P.J. J.: Effect of Ethanol, Moo-Young, M. See Skolpap, W., 706 Pate, C. See Menkhaus, TJ., 108
Acetate, and Phenol on Toluene Morihara, F. See Fujii, R.. 434 Peeters, L.
Degradation Activity and tod—/ux Morihara, F. See Fujii, R., 737 : Fachin, D.; Smout, C.: van Loey, A.:
Expression in Pseudomonas putida Mosier, N.S. Hendrickx, M.I Influence of (-Subunit
POD 102: Evaluation of the Metabolic ; Wilker, J.J.; Ladisch, M.R.: Rapid on Thermal and High-Pressure Process
Flux Dilution Model, 801 Chromatography for Evaluating Adsorp Stability of Tomato Polygalacturonase,
Mahadevan, R. See Wiback, S.J., 317 tion Characteristics of Cellulase Binding 543
Majone, M. See Dionisi., 842 Domain Mimetics, 756 Perrier, M., See Henry, O., 7
Malda, J. Miiller, R. See Pratt, A.B., 27 Pessela, B.C.C. See Wilson, I
: Rouwkema, J.; Martens, D.E.: le Comte. Murhammer, D.W., See Rhiel, M.H.. 852 Pettersson, G. See Gruno, M..
E.P.; Kooy, F.K.; Tramper, J.: van Naill, M.C. Pinto, F. See Cunha, A.E., 458
Blitterswijk, C.A.; Riesle, J.: Oxygen . Roberts, S.C.: Preparation of Single Cells Pinto, R. See Cuhha, A.E., 458
Gradients in Tissue-Engineered PEGT From Aggregated Taxus Suspension Pitner, J.B.. See Guarino, R.D., 775
PBT Cartilaginous Constructs Cultures for Population Analysis, 817 Pogoreve, M. See Kosjek, B., 55
Measurement and Modeling, 9 Nagamune, T. See Takazawa, T., 399 Poulsen, B.R. See van de Vondervoort,
Malherbe, S. Nakashima, N. P.J.L., 301
. Fromion, V.: Hilgert, N.; Sablayrolles, ; Tamura, T.: A Novel System for Powers, S.M. See Wickramasinghe, S.R..,
J.-M. Modeling the Effects of Expressing Recombinant Proteins Over 612
Assimilable Nitrogen and Temperature a Wide Temperature Range From 4 to Pratt, A.B.
on Fermentation Kinetics in Enological 134, 130 . Weber, F.E.; Schmoekel, H.G.; Miiller, R.:
Conditions, 26 Nandakumar, K. Hubbell, J.A.: Synthetic Extracellular
Manabe, M. : Obika, H.; Utsumi, A.: Ooie, T.; Yano, T Matrices for In Situ Tissue Engineering, 27
; Mie, M.; Yanagida, Y.; Aizawa, M.: In Vitro Laser Ablation of Laboratory Puccetti, C., See Dionisi, D., 842
Kobatake. E.: Combined Effect of Elec Developed Biofilms Using an Nd:YAG Puhakka, J.A. See Kaksonen, A.H., 332
trical Simulation and Cisplatin in HeLa Laser of 532 nm Wavelength, 729 Qian, X. See Qian, Z.-G., 595
Cell Death, 661 Narayan, S. See Lim, K.-i.. 650 Qian, X. See Qian, Z.-G., 809
Margaritis, A. See Rowe. G.E.. 3 Nayak, A. See Bhattacharya, S., 3 Qian, Z.-G.
Marison, I.W. See Wyss, A.. 563 Nielsen, H.B. : Zhao, Z.-J.; Tian, W.-H.: Xu, Y.:
Martens, D.E. See Malda, J.. 9 ; Mladenovska, Z.: Westermann, P.: Zhong, J.-J.: Qian, X.: Novel Synthetic
Martensson, L.G,E. See Dahlstr6m, M.. | \hring, B.K.: Comparison of Two-Stage Jasmonates as Highly Efficient Elicitors
Martins, A.M.P. Chermophilic (68°C/55°C) Anaerobic for Taxoid Production by Suspension
: Heijnen, J.J.; van Loosdrecht, M.C.M Digestion With One-Stage Thermophilic Cultures of Taxus chinensis, 595
Bulking Sludge in Biological Nutrient (55°C) Digestion of Cattle Manure, 291 Qian, Z-G.
Removal Systems, 125 Nielsen, J. See Grotkjzer, T.. 209 : Zhao, Z-J.. Xu, Y.: Qian, X.: Zhong, J-J
Martyano, I. See Lele, B.S., 628 Obata, K. See Akutsu, J.-i., 667 Novel Chemically Synthesized Hydroxyl-
Mateo, C. Obika, H., See Nandakumar, K., 729 Containing Jasmonates as Powerful
; Palomo, J.M.; van Langen, L.M.; van Ogino, H. See Bobe, I.M., 365 Inducing Signals for Plant Secondary
Rantwijk, F.: Sheldon, R.A.: A New, Ogunnaike, B. See Mikkilineni, V.. 117 Metabolism, 809
Mild Cross-Linking Methodology to Okochi, M. See Akutsu, J.-i.. 667 Ren, D.
Prepare Cross-Linked Enzyme Oku, T. See Fujii, R.. 434 Bedzy k. L.A.: Setlow, P.; Thomas, S.M.:
Aggregates, 273 Oku, T. See Fujii, R.. 737 Ye. R.W.; Wood, T.K.: Gene E xpression
Maugard, T. See Erable, B., 47 Olivera-Nappa, A. in Bacillus subtilis Surface Biotilms
Menkhaus, T.J. Andrews, B.A.; Asenjo, J.A.: A Mixed With and Without Sporulation and the
; Pate, C.; Krech, A.; Glatz, C.I Mechanistic-Electrostatic Model to Importanceo f yveR ie for Biofilm
Recombinant Protein Purification From Explain pH Dependence of Glycosy! Maintenance, 344
Pea, 108 Hydrolase Enzyme Activity, 573 Rhiel, M.H.
Merchuk, J.C. See Glicklis, R., 672 Olsen, M.M. See Yuk. I-H.Y.. 637 : Cohen, M.B.: Arnold, M.A.: Murhammer,
Merritt, J. See Mikkilineni, V.. 117 Ono, T. See Sakai, S., 168 D.W.: On-Line Monitoring of Human
Michelli, A.. See Dionisi, D., 842 Ooie, T.. See Nandakumar, K.. 729 Prostate Cancer Cells in a Perfusion
AUTHOR INDEX
Rotating Wall Vessel by Near-Infrared Sirkar, K.K. See Feins, M., 603 Vanrolleghem, P.A.
Spectroscopy, 852 Sjogren, M. See Dahlstrém, M., | ; Sin, G.; Gernaey, K.V.: Transient
Riesle, J. See Malda, J., 9 Skolpap, W. Response of Aerobic and Anoxic
Rinzema, A. See Schutyser, M.A.I., 405 ; Scharer, J.M.; Douglas, P.1 Activated Sludge Activities to Sudden
Roberts, S.C., See Naill, M.C., 817 Moo-Young, M.: Fed-Batch Substrate Concentration Changes, 277
Rogers, P.L., See Rosche, B., 788 Optimization of a-Amylase and Vanrolleghem, P.A. See Wyffels, S., 531
Rosche, B. Protease-Producing Bacillus subtilis Vera, J.H. See Shin, Y.-O., 698
; Breuer, M.; Hauer, B.; Rogers, P.1 Using Markov Chain Methods, 706 Verlent, I.
Biphasic Aqueous/Organic Biotransform- Smout, C. See Peeters, L., 543 : Van Loey, A.;: Smout, C.; Duvetter, T.;
ation of Acetaldehyde and Benzaldehyde Smout, C. See Verlent, I., 63 Hendrickx, M.E.: Purified Tomato Poly-
by Zymomonas mobilis Pyruvate Srienc, F. See Carlson, R., 149 galacturonase Activity During Thermal
Decarboxylase, 788 Stampfer, W., See Koskek, B., 55 and High-Pressure Treatment, 63
Rossi, S. See De Maio, A., 308 Straathof, A.J.J. See Cvetkovic, A., 389 Verstraete, W. See Wyffels, S., 531
Rouwkema, J. See Malda, J., 9 Straathof, A.J.J. See Buque-Taboada, Viikari, L. See Palonen, H., 550
Rowe, G.E. E.M., 795 Viravaidya, K.
; Margaritis, A.: Bioprocess Design Su, W.W. See Paramban, R.I., 687 ; Jan, E.; Shuler, M.L.: Lipid-Gel and
and Economic Analysis for the Swartz, J.R. See Jewett, M.C., 19 Poly(Dimethylsiloxane) Film to Mimic
Commercial Production of Environmen- Swartz, J.R. See Yin, G., 188 Bioaccumulation in Adipocytes, 643
tally Friendly Bioinsecticides From Tajima, H. See Akutsu, J.-i., 667 Visser, J. See van de Vondervoort, P.J.L., 301
Bacillus thuringiensis HD-\ kurstaki, 377 Takazawa, T. Volcke, E.I.P. See Wyffels, S., 531
Rowley, J.A.. See Guarino, R.D., 775 : Kamiya, N.; Ueda, H.; Nagamune T. von Stockar, U. See Wyss, A., 563
Ruijter, G.J.G. See van de Vondervoort, Enzymatic Labeling of a Single Chain Voragen, A.G.J. See Broersen, K., 7
P.J.1., 301 Variable Fragment of an Antibody Wahnon, D. See Shin, Y.-O., 698
Russell, A.J. See Lele, B.S., 628 With Alkaline Phosphatase by Wang, L.-F. See Lai, Y.-P., 622
Riiterjans, H. See Lele, B.S., 628 Microbial Transglutaminase, 399 Wangikar, P.P. See Bapat, P.M., 201
Sablayrolles, J.-M. See Malherbe, S., 261 Tamura, T. See Nakashima, N.,136 Weber, F.E. See Pratt, A.B., 27
Saha-Chaudhury, N.M. See Boominathan, Tarabiono, C. See Secundo, F., 236 Weber, M.E. See Shin, Y.-O., 698
N.M., 243 Thomas, S.M. See Ren, D., 344 Weber, W. See Fux, C., 174
Sahajwalla, V. See Boominathan, N.M., 243 Thomaz, M. See Cunha, A.E., 458 Westermann, P. See Nielsen, H.B., 291
Sakai, S. Tian, W.-H. See Qian, Z.-G., 595 Wiback, S.J.
Kawabata, K.: Ono, T.; ljima, H.: Timmins, M.R., See Guarino, R.D., 775 ; Mahadevan, R.; Palsson, B.@.: Using
Kawakami, K.: Preparation of Tojo, Y. See Akutsu, J.-i., 667 Metabolic Flux Data to Further Constrain
Mammalian Cell-Enclosing Subsieve Tramper, J. See Malda, J., 9 the Metabolic Solution Space and Predict
Sized Capsules (<100 ppm) in ¢ Tsuruhata, K. See Mitsuda, Y., 217 Internal Flux Patterns: The Escherichia
Coflowing Stream, 168 Uda, T. See Fujii, R., 434 coli Spectrum, 317
San, K.-Y. See Hughes, E.H., 718 Uda, T. See Fujii, R., 737 Wickramasinghe, S.R.
Schaffer, D.V., See Ignowski, J.M., 827 Uda, T. See Mitsuda, Y., 217 ; Han, B.; Carlson, J.O.; Powers, S.M
Scharer, J.M. See Skolpap, W., 706 Ueda, H. See Takazawa, T., 399 Clearance of Minute Virus of Mice
Schiavone, M. See Bhattacharya, S., 37 Ulgen, K.O. See Cakir, T., 251 by Fluccolation and Microfiltration, 612
Schmoekel, H.G. See Pratt, A.B., 27 Utsumia See Nandakumar K., 729 Wileén, B.-M.
Schuleit, T. See van de Vondervoort Valjamiae, P. See Gruno, M., 503 ; Gapes, D.: Keller, J.: Determination of
P.J.1., 301 Vallero, M.V.G. External and Internal Mass Transfer
Schutyser, M.A.I. : Sipma, J.; Lettinga, G.; Lens, P.N.1 Limitation in Nitrifying Microbial
; Briels, W.J.; Boom, R.M.; Rinzema, A.: High-Rate Sulfate Reduction at High Aggregates, 445
Combined Discrete Particle and Contin- Salinity (up to 90 mS.cm -) in Wilker, J.J.. See Mosier, N.S., 756
uum Model Predicting Solid-State Fer- Mesophilic UASB Reactors, 226 Wilson, L.
mentation in a Drum Fermentor, 405 van Blitterswijk, C.A. See Malda, J., 9 : Ilanes, A.; Pessela, B.C.C.; Abian, O.:
Secundo, F. Van Cleemput, O. See Wyffels, S., 531 Fernandez-Lafuente, R.; Guisan, J.M
; Carrea, G.; Tarabiono, C.; Brocca, S.; van de Vondervoort, P.J.1. Encapsulation of Crosslinked Penicillin
Lotti, M.: Activity and Enantioselectivity ; Poulsen, B.R.; Ruijter, G.J.G.:; G Acylase Aggregates in Lentikats
of Wildtype and Lid Mutated Candida Schuleit, T.; Visser, J.; Iversen, J.J.1 Evaluation of a Novel Biocatalyst
rugosa Lipase Isoform | in Organic Isolation of a Fluffy Mutant of in Organic Media, 558
Solvents, 236 Aspergillus niger from Chemostat Wood, T.K. See Ren, D., 344
Segawa, O. See Akutsu, J.-i., 667 Culture and Its Potential Use as a Wu, Z.-R. See Lai, Y.-P., 622
Setlow, P. See Ren, D., 344 Morphologically Stable Host for Wyffels, S.
Shanks, J.V. See Hughes, E.H., 718 Protein Production, 301 : Van Hulle, S.W.H.; Boeckx, P.; Volcke,
>
Sheardown, H. See King, M., 51 van der Wielen, L.A.M. See Cvetkovic, E.1.P.; Van Cleemput, O.; Varolleghem,
-
Sheldon, R.A. See Mateo, C., 27 4 A., 389 P.A.; Verstraete, W.: Modeling and
Shenkman, R.M. See Datar, R.P., 587 van der Wilien, L.A.M., See Buque- Simulation of Oxygen-Limited
Shin, Y.-O. Taboada, 795 Partial Nitritation in a
; Wahnon, D.: Weber, M.E.; Vera, J.H.: van der Zwaag, S. See Cvetkovic, A., 389 Membrane-Assisted Bioreactor
Selective Precipitation and Recovery of Van Hulle, S.W.H. See Wyffels, S., 531 (MBR), 53
Xylanase Using Surfactant and Organic van Langen, L.M. See Mateo, C., 273 Wyman, C.E. See Yang, B., 88
Solvent, 698 van Loey, A. See Peeters, L., 543 Wyss, A.
Shuler, M.L. See Viravaidya, K., 643 Van Loey, A. See Verlent, I., 63 ; von Stockar, U.; Marison, I.W.:
Sin, G. See Vanrolleghem, P.A., 277 van Loosdrecht, M.C.M. See Martins, Production and Characterization of
Sinisi, C., See Dionisi, D., 842 A.M.P., 125 Liquid-Core Capsules Made From
Sipma, J. See Vallero, M.V.G.,226 van Rantwijk, F. See Mateo, C., 273 Cross-Linked Acrylamide
AUTHOR INDEX
Copolymers for Biotechnological Yano, T., See Nandakamar, K., 729 Enzyme Studies of Polyhemoglobin-
Applications, 563 Yasuda, M. See Bobe, I.M., 365 Tyrosinase, 835
Xu, Y. See Qian, Z.-G., 595 Ye, R.W. See Ren, D., 344 Yuk, L.H.Y.
Xu, Y. See Qian, Z.-G., 809 Yin, G. ; Olsen, M.M.; Geyer, S.; Forestell, S.P
Yamamoto, N. See Mitsuda, Y., 217 ; Swartz, J.R.: Enhancing Multiple Perfusion Cultures of Human Tumor
Yanagida, Y. See Manabe, M., 661 Disulfide Bonded Protein Folding in Cells: A Scalable Production
Yang, B. a Cell-Free System, 188 Platform for Oncolytic Adenoviral
; Wyman, C.E.: Effect of Xylan and Yin, J. See Lim, K.-i., 650 Vectors, 637
Lignin Removal by Batch and Yohda, M. See Akutsu, J.-i., 667 Zhao, Z.-J. See Qian, Z.-G., 595
Flowthrough Pretreatment on the Young, J.A.T. See Lim, K.-i., 650 Zhao, Z.-J. See Qian, Z.-G., 809
Enzymatic Digestibility of Corn Yu, B. Zhong, J.-J. See Qian, Z.-G., 595
Stover Cellulose, 88 ; Chang, T.M.S.: In Vitro and In Vivo Zhong, J.-J. See Qian, Z.-G., 809
AUTHOR INDEX
Biotechnology and Bioengineering
Subject Index to Volume 86
(R)-phenylacetylcarbinol, 788 bioprocess design, 37 directed migration, 628
‘C-labeling experiments, 209 bioreactors, 308, 493 discrete particle, 405
4-oxoisophorone, 795 bioreduction, 795 dissolved oxygen, 425
@> agonists, | bioremediation, 47 dissolved oxygen concentration, 445
absorbance, 163 biosensor, 163 disulfide bond formation, 188
acetaminophen, 512 biotransformation, 788 DNA purification, 667
acetate, 226 biovolume, 765 drum fermentor, 405
acoustic separator, 765 bone, 27
acrylamide, 563 economic visibility analysis, 377
activated sludge, 842 caffeine, 512 electrical stimulation, 661
activated sludge flocs, 445 Candida rugosa lipase, 236 electrophoresis, 667
activated sludge modeling, 277 cartilage, 9 elementary flux modes, 25]
activity, 236 cartilage production, 747 elementary mode analysis, 149
adenovirus production, 637, 765 catabolite repression, 801 elicitation, 595
alcohol dehydrogenase, pe a catalytic antibody, 217 ELISA, 399
alcoholic fermentation, 520 catalytic triad, 217 embryoid bodies, 493
alginate, 168 Catharanthus roseus, 718 enantioselectivity, 236
alginate scaffolds, 672 CCR-5 peptide, 217 encapsulation, 563
alternating systems, 277 cell culture, 425 entomopathogenic nematode damage, 96
A/yssum bertolonii, 243 cell death, 661 entrapment, 558
anisotropy, 389 cell therapy, 168 enzymatic activity, 57> 3, 39753
anoxic and anaerobic selectors, 125 cell-free protein synthesis, enzymatic digestibility, 88
anthranilate synthase, 718 cellobiose, 5</0\32 enzyme, 217, 628, 827
antibiotic, 414 cellulase, 503, 698, 756 enzyme activity, 573
AOT, 698 cellulose, 503 enzyme evolution, 196
aqueous/organic two-phase reactor, 788 cellulose adsorption, 756 enzyme kinetics, 365
ASA, 512 cellulose binding domain, 75 enzymes in organic solvents, 558
Aspergillus niger, 301 cellulose hydrolysis, 550 epitope, 434
assay, 775 chemokine receptor, 217 erythromycin $12
automation, 667 chemostat, 301, 801 Escherichia coli, 163, 681
Chinese hamster ovary cells, 612 ethanol, 226, 58
-galactosidase, 308 CHO-K1, 174 ethanol oxidation, 332
(s-lactoglobulin, 603 cholesterol, 650 ethyl methane sulfonate (EMS), 622
(s-Lactoglobulin, 78 chondrocyte, 9 extensional tlow, 96
}s-oxidation pathway, 681 chondrocytes, 174, 747 external and internal mass
3-subunit, 543 cisplatin, 661 transfer, 445
Bacillus subtilis, 706 CLSM, 389 extraction, 56
Bacillus subtilis fibrinolytic enzyme, 622 coflowing stream, 168 extreme pathways, 3
bacillus thuringiensis, 377 combined transcription—translation, 19
bacteria, 729 composite membranes, 603
baker’s yeast, 795 computational fluid dynamics, 96 fadB, 68}
barnacle, | concentration of CO,, 3 FadB homologous enzymes, 681
batch hydrolysis, 88 constraint-based modeling, 317 ffeedd--tb atch' cul.t ivation70,) 414
. 7 - ed-bdatch culture U6
beads, 196 control-effective flux analysis, 251
Berkheya coddii, 243 cross-linked enzyme aggregates fermentation, 201, 261 45
BHK-21 cells, 425 (C: LEAs), amt2.73 aati ferme%n tation —op timization, 458
bioaccumulation, 643 crosslinked en17z2y me aggregates, 5ae5 8 ffilroecfcluy.l ,a ti8o2n7, 6 )
bbbiiioooccaahutegamlmyietc: niatcla, t ip6o2an8t, h : wa2y2,6 149 cccrrryoossstssa-lllilininkzkiaentrgi,,:o n, 83o5te a7e95 ffllooww n7cc yyttooemmeettr‘r iyc, h8i1s7t oegrez Sarndeelis z n 1. 52me 0
biofilm, 729 cyprid larvae, | flowthrough reactor, 88
bbbbbiiiiiooooofffiiiiinnlllsf;t mmeor crattmigimacoeatinnii,decn e sts,e,4e n 6xa8pn 1r31ce t essa ,s ionF3,4r 4 344 cddDeye: ActcBioos pnivlooadnlse umntidticrreo ienm, ,em ri2sm0,i11 c6 r3 y5: 7 1,: 2 19 ffff:lllalil uuu uufoiooofrdrryei eesazscsoeeccpndneeh-icnzanebeeei tdec c nf ad eoge ,rtl v yipdaerebeti.7aepl7 cc5ioa tttnoiy rto3 ,, in0 ,n1 per 2o3 b7e6,5 tg
bioinsecticides production and costs, 3 a dengue virus foul|i ng,2 | ahr
biological nutrient removal (BNR), 125 deoxyribozyme, a furnase treatment, 243
bioluminescence, 801 Desulfobacter halotolerans, 226
biomass fermentation, 587 dextran, 273 gene expression ratios,
bio-ore, 243 diatoms, 729 gene expression, 117
biopesticide, 96 differentiation, 493 genomics, | 17
bioplastic, 628 diffusion, 389, 650 glutamic acid, 842
Biotechnology and Bioengineering, Vol. 86, Pp. 870-872 (2004)
glycoside hydrolases. 573 manure, 29] paaF, 681
glycosylation, 78 mass transfer in spheroids, 672 paaG, 681
gold particle, 72 mathematical model, 261, 573 packed-bed bioreactor, 308
granules, 445 mathematical modeling, 414 paclitaxel, 817
green fluorescent protein, 687 matrix, 27 parameter estimation, 277, 706
growth factor, 27 MBR, 531 partial nitritation, 531
GTX, 174 media balancing, 201 PC-3 human prostate cancer cells, 852
melanoma, 835 PDMS, 643
haloalkane dehalogenase, 47 metabolic engineering, 174 PEG-hydrogels, 747
halotolerant SRB, 226 metabolic flux analysis, 209, 317 penicillin acylase, 558
HEK-293 cells, 765 metabolic flux dilution, 801 penicillin G acylase, 273
HeLa, 661 metabolic flux state, 149 peptide, 27
Helicobacter pylori, 434, 737 metabolism, 117, 149 peptide synthesis, 365
hemin, 72 metal precipitation, 332 perfusion bioreactors, 637
hepatocytes, 672 methanol induction, 458 perfusion culture, 765
heterologous protein production, 301 methylotrophic yeast, 458 peroxidase, », 817
Heterorhabditis, 96 microaerophilic conditions, 125 perstraction, 563
high cell density, 458 microbial population dynamics, 9] pH dependence, 573
high-density cell culture, 637 microcapsule, 168 PHG Storage, 842
high pressure, 543 microencapsulation, 563 phosphate and pH homeostasis, 19
high salinity, 226 microfiltration, 612 phosphorus-accumulating organisms
homing endonucleases, 174 microsensor, 445 (PAQOs), 125
HT-1080, 174 Mie theory, 163 phytomining, 243
human embryonic stem cells, 493 mimetic, 756 Pichia pastoris, 458
human tumor cells, 637 minute virus of mice, 612 plant cell culture, 595, 809
HUVEC, 661 model, 775, 827 plant defense response, 809
hybrid protein, 399 modeling, 9, 531, 706 plant host, 108
hydraulic retention time, 332 monoclonal antibody, 434, 737 plant metabolic engineering, 718
hydrogel, 558 monosaccharides, 78 plasminogen activator, 188
hydrogen bonding network, 573 morphological stability, 301 pO> (partial pressure of oxygen), 425
hydrolysis, 503 morphologically structured polonies, 117
models, 414 polyamines, 19
multicistronic, 174 polygalacturonase, 543
ibuprofen, 512 multigene metabolic engineering, 17- 4 polygalacturonase activity, 63
immobilization, 72, 558 multiwavelength spectroscopy, 163 polyhemoglobin, 835
immobilized carbonic anhydrase, 37 mutagenesis, 573 polyhemoglobin-tyrosinase, 835
immobilized cells, 196 myoglobin, 603 polyhistidine, 108
immobilized enzymes, 308 polyhydroxyalkanoates, 681
immobilized metal affinity polyvinyl alcohol, 558
naphthalene, 643
chromatography, 687 porous coatings, 628
naphthol, 643
in silico pathway analysis, 251 posttranslational modification, 399
natural and laboratory biofilm, 729
in situ product removal, 795 precipitating ligand, 698
near-infrared spectroscopy, 852
inactivation, 543 pretreatment, 88
nematode damage, 96
inducing signal, 809 process monitoring, 687
nerve agents, unpaginated
inhibition, 503 producer gas, 587
inhibitory effect, 434, 7 V-hydroxymethylacrylamide, 563 propionate, 226
nickle, 243
initial reaction rate, 365 protein cross-linking, 399
nitrification, 445
internal ribosome entry protein crystals, 389
nitrilase, 273
isothermal, 308 protein engineering, 573, 687
nitrogen, 261
protein folding, 188
NMR, 842
protein libraries, 196
kinetic, 82 non-isothermal, 308
protein purification, 687
novel reactors, 37
protein turnover, 209
novel synthetic jasmonates, 595
laminar flow, 168 protein ultrafiltration, 603
LentiKats, 558 proteolysis
lentivirus, 174 off-gas system, 445 PST-O1 protease, 365
lid, 236 oncolytic adenoviral vectors, 637 prRIDENT, 174
lidocaine, 512 on-line monitoring, 765, 85 > pulsed laser irradiation, 729
lignin removal, 88 operating strategies, 468 purification, 55
lipid-gel, 643 optical properties, 163 pyruvate decarboxylase, 788
lipid rafts, 650 optical sensor, 425 pyruvate, 19
local energy dissipation, 96 opumization problem, 706
low temperature, 136 organic solvents, 236
luciferase, 827 organic solvent tolerance, 55 random mutagenesis, 622
organic solvent-stable enzyme, 365 Rbm3, 174
magnetic beads, 667 oxygen consumption rate, 775 reactor performance, 291]
Maillard reaction, 78 oxygen gradient, 9 receptor sorting, 650
maintenance metabolism, 149 oxynitrilase, 273 recombinant, 108
SUBJECT INDEX
recombinant protein, 136 sporulation, 344 transcriptomics, 251
recovery, 108 static cell culture, 775 transgenic pea, 108
recovery solvent, 698 Steinernema, 96 transglutaminase 399
redox potential, 188 Streptomyces, 414 transglycosylation, 503
reporter gene, 827 subsieve-sized capsule, 168 trickling spray reactors, 37
respiration, 765 substrate interactions, 801] tris(4,7-diphenyl-1,
respirometry, 277 substrate metabolism, 277 10-phenanthroline)
retamycin, +14 sulfate reduction, 226, 332 ruthenium(II) chloride, 425
retroviral entry, 650 sulfide toxicity, 332 trypan blue, 75¢
Rhodococcus erythropolis, 47 surtace affinity, | two-phase bioreactors
Rhodococcus ruber, 55 surface biofilms, 344 two-phase model, 405
role of lignin, 550 surface modification, 550 two-stage digestion, 291
rotating wall vessel, 852 syngas, 587 tyrosine, 835
rotating wall vessels, 493 synthetic jasmonate derivatives, 809
UASB reactor 22¢ )
Saccharomyces cerevisiae, taxoid, 595 ultrafiltration membranes, 603
SAMY, 174 Taxus, 817 u-PA; mw. 174
SBR, 277 Taxus chinensis, 595, 809 urease, 434, 7
scattering, 163 temperature, 261
screening, 196 tensile stress, 96
SEAP, 174 terpenoid indole alkaloids, 718 Variomixing, 3(
secondary metabolism, 809 thermal, 543 VEGF, 174
secondary metabolites, 595 thermal and high-pressure Virus clearance 612
selectivity, 698 processing, 63 wasie air treatment, 47
self-assembly thermal stability, 78 wine, 26]
sequencing batch biofilter, 468 thermophilic, 291
sequencing batch reactor, 468 thiostrepton, 136 xylan removal SS
short-term batch experiments, 277 TipA promoter, 136 xylanase, 698
simulation, 531 tissue engineering, 9, 672
single cell, 817 titrimetry, 277 vdbU, 681
single-chain antibody fragment, 458 POF-SIMS, | yeast, 117
site-specific labeling, 399 TOGA sensor, 445 yeast physiology 520
sludge settleability, 12 Ss toluene dioxygenase, vicX, 681
solid gas biofilter, 47 tomato, 543 yvve R, 344
solid-state fermentation, 405 tomatoes, 63
solubilization, 37 transamination, 209 Z\ momon
SUBJECT INDEX