Biopolymers 1999: Vol 49 Index

9 Pages·1999·2.8 MB·English

Biopolymers
Author Index to Volume 49
Aghajari, N. See André; G., 107 Conroy, M. J. See Kikuchi, J., 361 Ferretti, J. A. See La Penna, G.,
Aleman, C. See Zanuy, D., 497 235
Amino, Y. See Mattern, R.-H., 525 Daragan, V. A. See Mikhailov, Fioravanti, R. See La Penna, G.,
André, G. BV. 33 235
—; Buléon, A.; Juy, M.; Aghajari, de Kruif, C. G. See Tuinier, R., 1 Fishman, J. B. See Esler, W. P.,
N.; Haser, R.; Tran, V.: De Kruif, K. G. See Ragona, L., 505
Amylose Chain Behavior in 44] Fleer, G. J. See Tuinier, R., |
an Interacting Context II. de Kruif, K. G. See Verheul, M.., Fontana, W. See Wuchty, S., 145
Molecular Modeling of a 1] Friso, A. See Spina, M., 255
Maltopentaose Fragment in Digate, R. J. See Yan, C., 55 Fujimoto, B. S. See Schurr, J. M.,
the Barley a-Amylase Doi, M. 355
Catalytic Site, 107
—,; Shinozaki, F.; In, Y.; Ishida,
Anon, M. C. See Jovanovich, G.,
T.; Yamamoto, D.; Ganis, P.
81
Kamigauchi, M.; Sugiura, M.; —; Valle, G.; Pandolfo, L.;
Asakura, T. See Kikuchi, J., 361
Hamada, Y.; Kohda, K.; Bertani, R.; Visentin, F.:
Shioiri, T.: Conformational Further Crystallographic
Bauer, W. R. See White, J. H., Change of Ascidiacyclamide Evidence of NH: -- 7
605 Caused by Asymmetric (System) and CO--: 7
Baumann, C. G. See Matulis, D., Modification for An (System) Interactions: The
451 Isoleucine Residue: Structural Structures of
Benedetti, E. See Mattern, R.-H., Analyses of [Gly], [Leu], and Bis(Diarylhydrazonecarbony])-
525 [Phe]scidiacyclamides by Methylene Derivatives
Benegas, J. C. X-Ray Diffraction and NMR [{ A rPhC—NNH—C(0O)},CH,]
—,; Pantano, S.; Vetere, A.; Spectroscopy, 459 (Ar = Ph, 2-C5H,N, 2-
Paoletti, S.: Polyelectrolytic Donald, A. M. See Waigh, T. A., C,H,S)*, 541
Aspects of the 9] Gao, J. Y.
Thermodynamics of Dubin, P. L. See Gao, J. Y., 185 —+; Dubin, P. L. : Binding of
Conformational Transition: Duong, T. H. See Gurlie, R., 313 Proteins to Copolymers of
k-Carrageenan in Formamide, Dwyer, D. S. Varying Hydrophobicity, 185
127 Molecular Simulation of the Ghilardi, J. R. See Esler, W. P.,
Bertani, R. See Ganis, P., 541 Effects of Alcohols on 505
Bloomfield, V. A. See Matulis, Peptide Structure, 635 Gidley, M. J. See Waigh, T. A.,
D., 451 9]
Brack, A. See Maget-Dana, R., 415 Edgell, M. H. See Waldner, J. C., Gnau, V. See Walk, T. B., 329
Brodsky, B. See Shah, N. K., 297 47] Goodman, M. See Mattern, R.-H.,
Buléon, A. See André, G., 107 Esler, W. P. 525
—:; Stimson, E. R.; Fishman, J. B.; Gruschus, J. M. See La Penna,
Cannon, G. C. See Martin, G. G., Ghilardi, J. R.; Vinters, G. 25
621 H. V.; Mantyh, P. W.; Guiles, R. D. See Yan, C., 55
Carrier, V. See Mercier, P., 21 Maggio, J. E.: Stereochemical Gurlie, R.
Chance, M. R. See Xie, A., 591 Specificity of Alzheimer’s —+; Duong, T. H.; Zakrzewska, K.:
Christensen, B. E. See Hjerde, T., Disease B-Peptide Assembly, The Role of DNA-Protein
71 505 Salt Bridges in Molecular
Confalonieri, L. See Ragona, L., Evans, J. S. See Xu, G., 303 Recognition: A Model Study,
441 Ewins, A. R. See Spina, M., 255 313
Biopolymers, Vol. 49, 649-652 (1999)
650 AUTHOR INDEX
Hamada, Y. See Doi, M., 459 Kiefer, J. E. See Saroff, H. A., Leliévre, D. See Maget-Dana, R.,
Haser, R. See André, G., 107 425 415
He, Q. See Xie, A., 591 Kikuchi, J. Li, W.
Heidelbach, F. See Waigh, T. A., —; Asakura, T.; Loach, P. A.; —; Liu, Z.; Lai, L.: Protein Loops
91 Parkes-Loach, P. S.: Shimada, on Structurally Similar
Heller, C. See Magniusdottir, S., K.; Hunter, C. N.; Conroy, Scaffolds: Database and
385 M. J.; Williamson, M. P.: A Conformational Analysis, 481
Hirabayashi, T. See Inai, Y., 551 Light-Harvesting Antenna Liu, Z. See Li, W., 481
Hjerde, T. Protein Retains Its Folded Loach, P. A. See Kikuchi, J., 361
—; Smidsrgd, O.; Christensen, Conformation in the Absence Longhi, R. See Ragona, L., 441
B. E.: Analysis of the of Protein—Lipid and Protein— Lovrien, R. E. See Matulis, D.,
Conformational Properties of Pigment Interactions, 361 45]
k- and u-Carrageenan by Kirkpatrick, A. See Shah, N. K., Lund, R. A. See White, J. H., 605
Size-Exclusion 297
Chromatography Combined Klein, T. E. Macgregor, R. B., Jr. See
with Low-Angle Laser Light —; Huang, C. C.: Computational Protozanova, E., 287
Scattering, 71 Investigations of Structural Madhusudhan, M. S.
Hofacker, I. L. See Wuchty, S., Changes Resulting from Point —,; Vishveshwara, S.: Comparison
145 Mutations in a Collagen-Like of the Dynamics of Bovine and
Huang, C. C. See Klein, T. E., Peptide, 167 Human Angiogenin: A
167 Ko, L. See Protozanova, E., 287 Molecular Dynamics Study,
Hunter, C. N. See Kikuchi, J., 361 Kohda, K. See Doi, M., 459 131
Kotovych, G. See Yamamoto, H., Maget-Dana, R.
In, Y. See Doi, M., 459 277 —+; Leliévre, D.; Brack, A.:
Inai, Y. Krimm, S. See Lee, S.-H., 195 Surface Active Properties of
—; Kurokawa, Y.; Hirabayashi, Kurokawa, Y. See Inai, Y., 551 Amphiphilic Sequential
Isopeptides: Comparison
T.: Terminal Effect of Chiral
Between a-Helical and B-
Residue on Helical Screw
Sense in Achiral Peptides, Lahr, S. J. See Waldner, J. C., Sheet Conformations, 415
47] Maggio, J. E. See Esler, W. P.,
551
Lai, L. See Li, W., 481 505
Isambert, H. See Magnusdottir,
Lamm, G. See Pack, G. R., 575 Magniusdéttir, S.
S:; 385
La Penna, G. —+; Isambert, H.; Heller, C.;
Ishida, T. See Doi, M., 459
—; Mormino, M.:; Pioli, F.; Perico, Viovy, J.-L.:
A.; Fioravanti, R.; Gruschus, Electrohydrodynamically
Jack, R. W. See Walk, T. B., 329 J. M.; Ferretti, J. A.: Induced Aggregation During
Jonsson, B. See Khan, M. O., 121 Smoluchowski Dynamics of Constant and Pulsed Field
Jovanovich, G. the vnd/NK-2 Homeodomain Capillary Electrophoresis of
—; Anon, M. C.: Amylose—Lipid from Drosophila DNA, 385
Complex Dissociation. A melanogaster: First-Order Mammi, S. See Ragona, L., 441
Study of the Kinetic Mode-Coupling Mantyh, P. W. See Esler, W. P.,
Parameters, 81 Approximation, 235 505
Jung, G. See Walk, T. B., 329
Lavery, R. See Lebrun, A., 341 Martin, G. G.
Juy, M. See André, G., 107 Lebrun, A. —; Cannon, G. C.; McCormick,
—+; Lavery, R.: Modeling DNA C. L.: Adsorption of a Fungal
Kamigauchi, M. See Doi, M., Deformations Induced by Hydrophobin onto Surfaces as
459 Minor Groove Binding Mediated by the Associated
Kasapis, S. See Tsoga, A., 267 Proteins, 341 Polysaccharide Schizophyllan,
Kempter, C. See Walk, T. B., Lee, S.-H. 621
329 —; Mirkin, N. G.; Krimm, S.: A Mattern, R.-H.
Khan, M. O. Quantitative Anharmonic —; Amino, Y.; Benedetti, E.;
—; Jénsson, B.: Electrostatic Analysis of the Amide A Goodman, M.:
Correlations Fold DNA Band in a-Helical Poly(L- Conformational Analysis of
(Rapid Communication), 121 Alanine), 195 Potent Sweet Taste Ligands
AUTHOR INDEX 651
by NMR and Computer Nachman, R. J. See Moyna, G., Richardson, R. K. See Tsoga, A.,
Simulations, 525 403 267
Matulis, D. Nordenskiéld, L. See van Dam, Riekel, C. See Waigh, T. A., 91
—; Baumann, C. G.; Bloomfield, L., 41 Roefs, P. F. M. See Verheul, M.,
V. Ay Lovrien, R: E.: 1- 11
Anilino-8-Naphthalene Olieman, C. See Tuinier, R., 1 Rosconi, M. See Spector, S..,
Sulfonate as a Protein Roy, S. See Mercier, P., 21
Conformational Tightening
Pack, G. R. Saroff, H. A.
Agent, 45]
—; Wong, L.; Lamm, G.: Divalent
—+; Kiefer, J. E.: The Legacies of
Mayo, K. H. See Mikhailov,
Cations and the Electrostatic
Langmuir, Ising, and Pauling:
Bm V¥.,.373
Potential Around DNA:
Ligand Binding and the
McCammon, J. A. See Smart,
Monte Carlo and Poisson—
Helix—Coil Transition, 425
Be hin ZO Boltzmann Calculations, 575 Savoie, R. See Mercier, P., 21
McCormick, C. L. See Martin, Pandolfo, L. See Ganis, P., 541
Schurr, J. M.
G. G., 621 Pantano, S. See Benegas, J. C.,
—; Fujimoto, B. S.: Dynamic
Mercier, P. [27
Twisting Correlations in a
—; Carrier, V.; Roy, S.; Savoie, Paoletti, S. See Benegas, J. C.,
Model DNA with Uniform
R.: Raman Spectroscopic 127
Torsion Elastic Constant, 355
Measurements in Self- Parker, K. H. See Spina, M., 255 Schuster, P. See Wuchty, S., 145
Pressurized Aqueous Parkes-Loach, P. S. See Kikuchi, Sclavi, B. See Xie, A., 591
Solutions Above 100°C: The J., 361 Scott, A. I. See Moyna, G., 403
Melting of Poly(G) and Pedersen, J. S. See Verheul, M.., Sejbal, J. See Yamamoto, H., 277
Poly(G) + Poly(C), 21 11 Shah, N. K.
Mikhailov, D. V. Peggion, E. See Ragona, L., 441 —+; Brodsky, B.; Kirkpatrick, A.;
Peng, Z.-H.
—+; Washington, L.; Voloshin, Ramshaw, J. A. M.:
Solid Phase Synthesis and NMR
A. M.; Daragan, V. A.; Structural Consequences of
Conformational Studies on
Mayo, K. H.: Angular p-Amino Acids in Collagen
Cyclic Decapeptide Template
Variances for Internal Bond Triple-Helical Peptides, 297
Rotations of Side Chains in Molecule, 565 Shimada, K. See Kikuchi, J., 361
GXG-Based Tripeptides Perico, A. See La Penna, G., 235 Shinozaki, F. See Doi, M., 459
Derived from '*C-NMR Pielak, G. J. See Waldner, J. C., Shioiri, T. See Doi, M., 459
Relaxation Measurements: 471 Smart, J. L.
Pioli, F. See La Penna, G., 235
Implications to Protein —; McCammon, J. A.:
Possani, L. D. See Yamamoto, H., Phosphorylation Stabilizes the
Folding, 373
277
N-Termini of a-Helices, 225
Miller, L. See Xie, A., 591
Protozanova, E.
Smidsr@d, O. See Hjerde, T., 71
Millhauser, G. L. See Trulson, —; Ko, L.; Macgregor, R. B., Jr.:
Spector, S.
J. A., 215 DNA Frayed Wires:
—+; Rosconi, M.; Raleigh, D. P.:
Mirkin, N. G. See Lee, S.-H., 195 Differential Polymerization of
Conformational Analysis of
Mohanty, U. d(A,,G,,,) Oligonucleotides, 287
Peptide Fragments Derived
—; Stellwagen, N. C.: Free
from the Peripheral Subunit-
Solution Mobility of
Ragona, L. Binding Domain from the
Oligomeric DNA, 209
—+; Confalonieri, L.; Zetta, L.; De Pyruvate Dehydrogenase
Molinari, H. See Ragona, L., 441
Kruif, K. G.; Mammi, S.; Multienzyme Complex of
Mormino, M. See La Penna, G., Peggion, E.; Longhi, R.: Bacillus stearothermophilus:
235 Molinari, H.: Equilibrium Evidence for Nonrandom
Moyna, G. Unfolding CD Studies of Structure in the Unfolded
—,; Williams, H. J.; Nachman, R. J.; Bovine B-Lactoglobulin and State, 29
Scott, A. I.: Conformation in Its 14-52 Fragment at Acidic Spina, M.
Solution and Dynamics of a pH, 441 —,; Friso, A.; Ewins, A. R.;
Structurally Constrained Linear Raleigh, D. P. See Spector, S., 29 Parker, K. H.; Winlove,
Insect Kinin Pentapeptide Ramshaw, J. A. M. See Shah, C. P.: Physicochemical
Analogue, 403 N. K., 297 Properties of Arterial Elastin
AUTHOR INDEX
and Its Associated Vinters, H. V. See Esler, W. P., Xie, A.
Glycoproteins, 255 505 —; He, Q.; Miller, L.; Sclavi, B.;
Stefansson, M. Viovy, J.-L. See Magniusdottir, S., Chance, M. R.: Low
Electrohydrodynamic Instabilities 385 Frequency Vibrations of
and Segregation of Visentin, F. See Ganis, P., 541 Amino Acid Homopolymers
Polysaccharides in Capillary Vishveshwara, S. See Observed by Synchrotron
Polymer Solution Madhusudhan, M. S., 131 Far-IR Absorption
Electrophoresis, 515 Voloshin, A. M. See Mikhailov, Spectroscopy: Excited State
Stellwagen, N. C. See Mohanty, DEV 375 Effects Dominate the
U., 209 Temperature Dependence of
Stewart, J. M. See Yamamoto, Waigh, T. A. the Spectra, 591
H., 277 —+; Donald, A. M.; Heidelbach, F.; Xu, G.
Stimson, E. R. See Esler, W. P., Riekel, C.; Gidley, M. J.: —,; Evans, J. S.: Model Peptide
505 Analysis of the Native Studies of Sequence Repeats
Stuart, M. A. C. See Tuinier, Structure of Starch Granules Derived from the
Rig with Small Angle X-Ray Intracrystalline
Sugiura, M. See Doi, M., 459 Microfocus Scattering, 91 Biomineralization Protein,
Sifmuth, R. See Walk, T. B., Waldner, J. C. SMS0. I. GVGGR and
329 —+; Lahr, S. J.; Edgell, M. H.; GMGGQ Repeats, 303
Pielak, G. J.: Nonideality and
Tran, V. See André, G., 107 Protein Thermal
Yamamoto, D. See Doi, M., 459
Trulson, J. A. Denaturation, 471
Yamamoto, H.
—; Millhauser, G. L.: The Effect Walk, T. B.
—-; Sejbal, J.; York, E.; Stewart,
of Mutations on Peptide —; Sii8muth, R.; Kempter, C.;
J. M.; Possani, L. D.;
Models of the DNA Binding Gnau, V.; Jack, R. W.; Jung,
Kotovych, G.: An NMR
Helix of p53: Evidence for a G.: Identification of Unusual
Conformational Analysis of a
Correlation Between Structure Amino Acids in Peptides
Synthetic Peptide Cn2(1-15)
and Tumorigenesis, 215 Using Automated Sequential
NH,-S-S—Acetyl—Cn2(52-
Tsoga, A. Edman Degradation Coupled
66)NH, from the New World
—+; Kasapis, S.; Richardson, R. K.: to Direct Detection by
Centruroides noxius 2 (Cn2)
The Rubber-to-Glass Electrospray-Ionization Mass
Scorpion Toxin: Comparison
Transition in High Sugar Spectrometry, 329
of the Structure with Those
Agarose Systems, 267 Washington, L. See Mikhailov,
of the Centruroides Scorpion
Tuinier, R. OV. 393
Toxins, 277
—+; Zoon, P.; Olieman, C.; Stuart, White, J. H.
Yan, C.
M. A. C.; Fleer, G. J.; de —+; Lund, R. A.; Bauer, W. R.:
—-; Digate, R. J.; Guiles, R. D.:
Kruif, C. G.: Isolation and Effect of Salt-Dependent
NMR Studies of the Structure
Physical Characterization of Stiffness on the Conformation
and Dynamics of Peptide E,
an Exocellular of a Stressed DNA Loop
an Endogenous Opioid
Polysaccharide, | Containing Initially Coplanar
Peptide that Binds with High
Bends, 605
Affinity to Multiple Opioid
Valle, G. See Ganis, P., 541 Williams, H. J. See Moyna, G.,
Receptor Subtypes, 55
van Dam, L. 403
York, E. See Yamamoto, H., 277
—; Nordenskidld, L.: Interactions Williamson, M. P. See Kikuchi,
of Polyamines with the DNA J., 361
Octamers d?CG), and Winlove, C. P. See Spina, M.., Zakrzewska, K. See Gurlie, R.,
d(GGAATTCC): A 'H-NMR 255 313
Investigation, 41 Wong, L. See Pack, G. R., 575 Zanuy, D.
Verheul, M. Wuchty, S. —; Aleman, C.: Modeling of the
—+; Pedersen, J. S.; Roefs, —+; Fontana, W.; Hofacker, I. L.; a-Helix Conformation of
P. FM. de Kru, KG: Schuster, P.: Complete Homopeptides Constituted by
Association Behavior of Suboptimal Folding of RNA a-L-Glutamic Acid, 497
Native B-Lactoglobulin, 11 and the Stability of Zetta, L. See Ragona, L., 441
Vetere, A. See Benegas, J. C., 127 Secondary Structures, 145 Zoon, P. See Tuinier, R., |
Biopolymers
Subject Index to Volume 49
AB aggregation, 505 Catabolite activator protein, 313 DNA stretching, 341
AB deposition, 505 Cataly sp., 107 DNA-polyamine interactions, 41
Accessible surface area, 459 CD, 215, 441, 471 DNA-protein complexation, 313
Active and binding sites, 131 CD study, 551 DNA-binding helix, 215
Adsorption, 415 Centruroides sculpturatus Ewing, Donnan equilibria, 471
Agarose, 267 277 Dynamic light scattering, 451
Aggregation, 515 Chain behaviors, 107 Dynamic programming, 145
Air/water interface, 415 Cn2(1—15)NH,—S—S-—acetyl—Cn2 Dynamic twisting correlations of
Alginate, 515 (52-66)NH,, 277 DNA, 355
Alzheimer’s disease, 505 '°C-nmr measurements, 373
Amide A, 195 Coil—globule transition, 12] Edman chemistry, 329
a-Aminoisobutyric acid, 551 Collagen, 297 Eglin c, 471
Amphiphilic polyelectrolytes, 185 Collagen-like peptides, 167 Elastin, 303
a-Amylase, 107 Computer simulations, 525 Electric field strength threshold,
Amylopectin, 91 Concentration fluctuations, 515 515
Amylose, 107 Conformation, 71, 277 Electrohydrodynamic instabilities,
Amylose-lipid complex, 81 Conformational analysis, 525, 565 515
Analytical ultracentrifugation, 471 Conformational energy calculation, Electrophoretic mobility, 287
Angular variances, 373 551 Electrostatic interactions, 121]
Anharmonic analysis, 195 Conformational transition, 7] Electrostatic ion—ion correlations,
Aqueous solution, 21 Conformational transition, 121
Arterial elastin, 255 thermodynamics of, 127 Enantiomeric peptides, 505
Ascidiacyclamide, 459 Conformationally restricted Entangled polymer solution, 385
Association, | 1 peptides, 403 Enthalpy—entropy compensation,
Atomic force microscopy, 621 Cooperativity, 425 8]
Copolymers, 185 Epifluorescence videomicroscopy,
Bacillus stearothermophilus, 29 Correlated disorder, 91 515
Backbone dynamics, 55 CO - - - m (systems) interactions, Exocellular polysaccharide, |
Barley, 107 541 Explicit and implicit solvation
Bent DNA, 605 Counterion condensation, 575 models, 403
Biased reptation theory, 385 Crystal structure, 541]
Biological polymers, 591 Cyclic peptide template, 565 Far-ir, 591]
Biomineralization, 303 Cytotoxicity, 459 Fermi resonance, 195
Bis(diarylhydrazonecarbony]) Field inversion capillary
methylene derivatives, 541 Data base, 481 electrophoresis, 385
Bovine serum albumin, 451 Density of states, 145 Finite element analysis, 605
B-Z transition, 41 Differential scanning calorimetry, Fourier transform ir, 591
47] Frayed wires, 287
C, symmetry, 459 Distance geometry and simulated Free solution electrophoretic
C,0,, 541 annealing, 403 mobility, 209
Capillary electrophoresis, 515 DNA, 121, 209, 355
Carbon suboxide, 541 DNA condensation, 121 Gel electrophoresis, 287
Carrageenan, 71 DNA curvature, 313 Gel permeation chromatography, |
«-Carrageenan, conformational DNA elasticity, 605 Gelatine, 297
transition in formamide, 127 DNA loop, 605 Glass transition, 267
Biopolymers, Vol. 49, 653-655 (1999)
654 SUBJECT INDEX
y-Globulin, 451 Light-harvesting antenna complex, p53, 215
Glycoproteins, 255 361 Peptide and protein sequencing,
Groove width, 341 Locally unfolded structure, 441] 329
Guanine-rich DNA, 287 Loop conformation, 481 Peptide fragments, 29
GXG-based tripeptides, 373 Loop modeling, 481 Peptide models, 215
Loop structure, 131, 481 Peptide/protein sequencer ion-
a-Helical and B-sheet Low-angle laser light scattering, spray mass-spectrometer
71 coupling, 329
conformations, 415
Peptides, 297
a-Helical poly(L-alanine), 195
Magnesium-DNA, 575 Peripheral subunit-binding domain,
Helical screw sense, 551
Maltopentaose, 107 29
a-Helix, 497, 635
Matrix proteins, 303 Persistence length, 605
a-Helix stability, 225
Histidine, 385 Melting, 21 pH, 11
Membrane protein, 361 Phase separation, 515
'H-nmr, 525
Method for the identification of Phosphate neutralization, 313, 341
Homeodomain containing protein,
235 unusual amino acids in Phosphorylation, 225
Homopeptides, 497 peptides and proteins, 329 Polyamines, 4]
Human and bovine angiogenin, Micelle structure, 55 Polyamphiphiles, 185
131 Microfibrils, 255 Polyelectrolyte aggregation, 385
Hyaluronate, 515 Modeling, 635 Polyelectrolytes, 209
Hydrazone derivatives, 541 Modified bases, 145 Polyelectrolytes, biological, 127
Hydrogen bond, 635 Molecular dynamics, 131, 167, Polyguanylic acid, 21
Hydrogen bonding, 167 459 Polyguanylic—polycytidylic acid,
Hydrophobic probe, 451 Molecular dynamics simulations, 21
Hydrophobicity, 185 235, 403 Poly(Leu-Lys), 415
Hydrophobins, 621 Molecular mechanics, 313 Poly(Leu—Lys—Lys—Leu), 415
Hydroxypropyl cellulose, 385 Molecular modeling, 107, 341 Polymer solution sieving media,
Molecular recognition, 313 515
Molecular weight, 71 Polysaccharides, 515
Indirect Fourier transformation, | i
Monomolecular films, 415 Potent sweet taste ligands, 525
Insect kinin neuropeptide mimetic
Multistranded DNA, 287 Protease inhibitor, 471
analogues, 403
Mutational buffering, 145 Protein binding, 185
Interactions, 425
Protein design, 565
Internal bond rotations, 373
NaCl concentration, | 1 Protein dynamics, 235
Intrapolymer micelle formation,
Neutrality, 145 Protein folding, 29, 215, 373
185
New World scorpion Centruroides Protein loop, 481
Invariant waters, 131
noxius 2, 277 Protein stability, 215, 471
Ion pair, 451
NH - -- 7 (systems) interactions, Protein thermodynamics, 471
Ionic distributions, 575
541 Protein—polymer interactions, 185
Ion-spray mass spectrometry, 329
nmr, 55, 215, 303, 361, 403, 459, Pulsed-field gradient, 303
Isoelectric buffer, 385
565 Putrescine, 41]
Isokinetic temperature, 81
nmr Relaxation, 235 Pyruvate dehydrogenase
Isolation, |
Nonideality, 471 multienzyme complex, 29
Isotherms, 185
Non-natural amino acids, 329
Normal modes, 313 Racemization, 297
Kinetic parameters, 81] Nuclear Overhauser enhancement, Raman spectra, 21]
361 Receptor subtype specificity, 55
B-Lactoglobulin, 11, 441 Nucleic acid—protein complexes, rms deviation, 131
Langevin dynamics, 225 34] RNA secondary structure, 145
Laser-induced fluorescence
detection, 515 Oligonucleotides, 41 Schizophyllan, 621
Left-handed 3,,.-helix, 551 One-dimensional lattice theory, Schizophyllum commune, 621
a-L-Glutamic acid, 497 425 Sea urchin embryo, 303
Light scattering, | Opioid peptide, 55 Sea urchin spicule, 303
SUBJECT INDEX
Segregation, 515 Spermidine, 41 Toxins, 277
Self-association, 21 Spermine, 41 Trifluoroethanol, 635
Sequential amphiphilic Spider silk dragline, 303 Triple helix, 297
isopeptides, 415 Starch granule, 91 Triple-helix, 167
B-Sheet, 565 Stereoisomers, 505 tRNA, 145
Side chain liquid crystal polymer, Stimulated emission, 591 B-Turn, 303
91 Suboptimal folding, 145
Unfolded state, 29
Side chains, 373 Sugar, 267
Urea unfolding, 441
Simulation, 225 Surface modification, 621
Size exclusion chromatography, 71 Synchrotron radiation, 591 Vibrationally excited states, 591
Small angle x-ray microfocus Synthetic’ peptide, 277 Viscometry, 451
scattering, 91
Small-angle neutron scattering, 11 TATA-box, 341 WLF, time function, 267
Smoluchowski diffusion, 235 Temperature function, 267 Writhe, 605
Solid phase peptide synthesis, 565 Terminal chiral residue(s), 551
X-ray diffraction, 459
Solid-state self-assembling, 541 Thermodynamic stability of
Solution structure, 55, 277 structure, 145 Z-dehydrophenylalanine, 551
Spectropolarimetry, 471 Torsional dynamics of DNA, 355 Z-DNA, 41