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Biopolymers 1997: Vol 44 Index PDF

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Preview Biopolymers 1997: Vol 44 Index

Nucleic Acid Sciences Author Index to Volume 44 Allen, M. D. See Tateno, M., Cheng, X. See Lloyd, R. S., 139 Hunter, W. N. See Brown, T., 335 Chen, L. See Berger, I., 257 91 Amano, N. See Tateno, M., 335 Chiu, T. K. See Dickerson, R. Arnold, E. See Ding, J., 125 E., 361 Jen-Jacobson, L. Protein-DNA Recognition Complexes: Benight, A. S. See Owczarzy, Delrow, J. J. See Schurr, J. M., Conservation of Structure R., 217 283 and Binding Energy in the Benight, A. S. See Schurr, J. M., Dickerson, R. E. Editorial to Transition State, 153 283 Volume 44, No. 4, 1997, Berger, I. 321 Kakinuma, J. See Tateno, M.., —; Cai, L.; Chen, L.; Rich, A.: Dickerson, R. E. 335 Energetics of the Lattice: —; Chiu, T. K.: Helix Bending Kim, S.-H. See Holbrook, S. R., Packing Elements in as a Factor in Protein‘/DNA 3 Crystals of Four-Stranded Recognition, 361 Koike, H. See Tateno, M., 335 Intercalated Cytosine-Rich Ding, J. Kopka, M. L. See Walker, W. DNA Molecules, 257 —; Hughes, S. H.; Arnold, E.: ba 3235 Berman, H. M. Crystal Studies Protein—Nucleic Acid of B-DNA: The Answers Interactions and DNA Lane, M. J. See Owczarzy, R., and the Questions, 23 Conformation in a Complex 217 Bloomfield, V. A. DNA of Human Lloyd, R. S. Condensation by Multivalent Immunodeficiency Virus —+; Cheng, X.: Mechanistic Link Cations, 269 Type 1 Reverse Between DNA Breslauer, K. J. Editorial to Transcriptase with a Double- Methyltransferases and DNA Volume 44, No. 2, 1997, Stranded DNA Template- Repair Enzymes by Base 123 Primer, 125 Flipping, 139 Breslauer, K. J. See Goodman, Drew, H. See Travers, A., 423 M., 1 Mooers, B. H. M. See Ho, P. S., Brown, T. Fujimoto, B. S. See Schurr, J. 65 —; Hunter, W. N.: Non-Watson— M., 283 Crick Base Associations in Neidle, S. Crystallographic DNA and RNA Revealed by Gallo, F. J. See Owczarzy, R., Insights into DNA Minor Single Crystal X-Ray 217 Groove Recognition by Diffraction Methods: Goodman, M. Drugs, 105 Mismatches, Modified —-,; Breslauer, K. J.: Editorials to Bases, and Nonduplex DNA, Vol. 44, Issue 1, 1997, 1 Owczarzy, R. 91 Goodsell, D. S. See Walker, W. —-; Vallone, P. M.; Gallo, F. J.; E3323 Paner, T. M.; Lane, M. J.; Cai, L. See Berger, I., 257 Benight, A. S.: Predicting Carey, J. See Szwajkajzer, D., Holbrook, S. R. Sequence-Dependent 181 —; Kim, S.-H.: RNA Melting Stability of Short Chaires, J. B. Editorial to Crystallography, 3 Duplex DNA Oligomers, Volume 44, No. 3, 1997, Ho, P. S. 217 199 —; Mooers, B. H. M.: Z-DNA Chaires, J. B. Energetics of Crystallography, 65 Paner, T. M. See Owczarzy, R., Drug—DNA Interactions, 201 Hughes, S. H. See Ding, J., 125 217 Nucleic Acid Science, Vol. 44, 437—438 (1997) 438 AUTHOR INDEX Plum, G. E. Thermodynamics of Sundaralingam, M. See Wahl, Turner, D. H. See SantaLucia, Oligonucleotide Triple M. C., 45 J., Jr., 309 Helices, 241 Suzuki, M. See Tateno, M., 335 Szwajkajzer, D. Rich, A. See Berger, I., 257 Vallone, P. M. See Owczarzy, —; Carey, J.: Molecular and R., 217 SantaLucia, J., Jr. Biological Constraints on —+; Turner, D. H.: Measuring the Ligand-Binding Affinity and Wahl, M. C. Thermodynamics of RNA Specificity, 181 —,; Sundaralingam, M.: Crystal Secondary Structure Structures of A-DNA Formation, 309 Tateno, M. Duplexes, 45 Schurr, J. M. —; Yamasaki, K.; Amano, N.; —+; Delrow, J. J.; Fujimoto, B. Kakinuma, J.; Koike, H.; Walker, W. L. —; Kopka, M. L.; Goodsell, D. S.; Benight, A. S.: The Allen, M. D.; Suzuki, M.: S.: Progress in the Design of Question of Long-Range DNA Recognition by ;gb- DNA Sequence-Specific Allosteric Transitions in Sheets, 335 Lexitropsins, 323 DNA, 283 Travers, A. Suck, D. DNA Recognition by —; Drew, H.: DNA Recognition Structure-Selective and Nucleosome Yamasaki, K. See Tateno, M.., Nucleases, 405 Organization, 423 335 Nucleic Acid Sciences Subject Index to Volume 44 Adaptability, 181 Extrahelical nucleotide, 139 Polyelectrolyte effect, 201 Adaptation, 153 Polymerase structure, 125 Free energy, 201 Additivity, 181 Polymers, 65 FREEHELIX, 361 A-DNA bending, 45 Preorganization, 181 A-DNA crystal structure, 45 Genomic sequences, 65 Protein-DNA complexes, 423 A-form DNA, 45 Groove binders, 201 Protein—DNA interaction, 125 AIDS, 125 G-tetrad, 91 Protein—DNA recognition, 153, Antigene, 241 361 Antisense, 241 Helix bending, 361 Histone octamer, 423 Quadruplexes, 91 Base flipping, 139 Hoogsteen, 241 Base mispairing, 45 Host—guest chemistry, 181 Rational drug design, 181, 323 B-DNA, 23, 361 Hydration, 65 Review, 3 Binding energy, 153 Hydrogen bonds, 91 Ribozyme, 3 RNA, 3, 91, 309 Calorimetry, 201 I-motif, 257 Roll, 361 Intercalation, 257 Catalytic RNA, 3 Intercalators, 201 Secondary structure, 283, 309 Conformation, 65 Intermolecular interactions, 181, Sequence recognition, 105 Conformational fluctuations, 423 257 Sequence-dependent hybridization Conformational range, 23 Internal loop, 3 reactions, 217 Crystal engineering, 257 Sequence-dependent melting Crystal lattice and packing, 257 Kink, 361 stability, 217 Crystal packing, 45 Lexitropsins, 323 Sequence-specific binding, 153 Crystal packing motif, 23 Long-range allosteric transitions, Sequence-specific polyamides, 323 Crystal structure, 3 283 B-sheet, 335 Crystal structures, 105 Loop, 91 Short duplex DNA, 217 Crystallography, 23 Single crystals, 65 Curvature, 361 Major groove, 335 Solvent-accessible surface area, Measurement errors, 309 201 Deformation, 423 Metal ion coordination, 45 Spermine binding, 45 Dinucleotide parameter, 335 Minor groove, 323, 335 State diagram, 241 Disproportionation, 241 Minor groove drugs, 105 Statistical mechanics, 269 DNA, 91, 201, 323 Mismatches, 91 Structure-selective nucleases, 405 DNA-binding protein, 423 Mispairs, 91 DNA condensation, 269 Modified bases, 91 T4 endonuclease VII, 405 DNA crystallography, 257 Multivalent cations, 269 Thermodynamics, 153, 201, 309 DNA kinetics, 269 Mutagenesis, 91 Tilt, 361 DNA methyltransferases, 139 DNA morphology, 269 Nonspecific binding, 153 Torsoids, 269 DNA-protein interaction, 335 Non-Watson—Crick base pairs, 91 Transfer RNA, 3 DNA recognition, 335, 405, 423 5’-nucleases, 405 Transition state, 153 DNA repair enzymes, 139 Nucleic acid hydration, 45 Triplex, 241 DNA reversibility, 269 Nucleic acids, 257 Triplexes, 91 DNase I, 405 Nucleosome recognition, 423 Watson—Crick base pairs, 91 DNA structure, 125 Nucleotide, 65 Writhe, 361 DNA transcriptional activation, Oligomers, 217 283 Oligonucleotides, 105 X-ray crystallography, 3 Domain size, 283 Optical melting, 309 X-ray crystallography, 125 Drugs, 201 X-ray structure, 405 Pl and SI nucleases, 405 Enzyme catalysis, 153 Phase diagram, 241 Z-DNA, 65 Nucleic Acid Science, Vol. 44, 439 (1997)

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