Biophysical Journal 1992: Vol 63 Table of Contents

15 Pages·1992·2.9 MB·English

biophysical journal
Published monthly for the Biophysical Society
by The Rockefeiier University Press.
Edited by the Biophysical Society in cooperation
with the Division of Biological Physics
of The American Physical Society
ee
Editorial Board Editor
Victor Bloomfield
Associate Editors
Elias Greenbaum
David Levitt
David D. Thomas
Tian Y. Tsong
Associate Editor for Education
Norma M. Allewell
Richard W. Aldrich Giuseppe iInesi
Leonard J. Banaszak Ken Jacobson
Joseph M. Beechem John E. Johnson
David Beveridge Howard Kutchai
Rodney L. Biltonen David Needham
Barbara Brodsky Kathryn F. La Noue
Robert G. Bryant Ira W. Levin
Donald M. Crothers Lee Makowski
Louis J. DeFelice John L. Markley
Ken A. Dill C. Robert Matthews
Thomas G. Ebrey J. Andrew McCammon
Donald S. Faber Wilma K. Olson
Sidney Fleischer Linda S. Powers
Yale E. Goldman M. Thomas Record, Jr.
David Gorenstein Gabor Szabo
Wayne L. Hubbell Nancy Thompson
Sek Wen Hui Douglas H. Turner
Volume 63
Rockefeller
° University New York
1992
copyright © 1992
by biophysical society
biophysical journal
july 1992
volume 63
number 1
Editorial Stuay of mechanisms of electric field-induced
DNA transfection ill. Electric parameters and other
Editorial. Victor Bloomfield
conditions for effective transfection. T. D. Xie
and Tian Y. Tsong
Channels and Receptors
Transport methods for probing the barrier domain
Implications of epidermal growth factor (EGF) of lipid bilayer membranes. Tian-xiang Xiang,
induced egf receptor aggregation. Carla Wofsy, Xueling Chen, and Bradley D. Anderson
Byron Goldstein, Kirk Lund, and H. Steven Wiley
Pulmonary surfactant protein SP-C causes
Gating of mammalian cardiac gap junction packing rearrangements of
channels by transjunctional voltage. dipalmitoylphosphatidyicholine in spread
riong-Zhan Wang, Jian Li, Larry F. Lemanski, and monolayers. Jesus Pérez-Gil, Kaushik Nag,
Richard D. Veenstra Svetla Taneva, and Kevin M. W. Keough
Gramicidin channe! selectivity. Molecular A membrane model for cytosolic calcium
mechanics calculations for formamidinium, oscillations. A study using Xenopus oocytes.
guanidinium, and acetamidinium. Brian Turano, M. Saleet Jafri, Sandor Vajda, Pedro Pasik, and
Michael Pear, and David Busath Boaz Gillo
Cadmium block of calcium current in frog Dynamic studies of proton diffusion in mesoscopic
sympathetic neurons. Frank Thévenod and heterogeneous matrix. |. Concentrated solutions
Stephen W. Jones of sucrose. M. Gutman, E. Nachiiel, and
Conditional probability analysis for a domain S. Kiryati
model of Ca?*-inactivation of Ca** channels.
Dynamic studies of proton diffusion in mesoscopic
Joel Keizer and Laura Weiss Maki heterogeneous matrix. Il. The interbilayer space
between phospholipid membranes. M. Gutman,
E. Nachliel, and S. Kiryati
Cell Surface Phenomena
Simulation of cell rolling and adhesion on surfaces Electric and Magnetic Field Effects
in shear flow: general results and analysis of
Dual-frequency dielectrophoretic levitation of
selectin-mediated neutrophil adhesion.
Canola protoplasts. Karan V. |. S. Kaler,
Daniel A. Hammer and Sachin M. Apte
Jing-Ping Xie, Thomas B. Jones, and
Micromanipulation of adhesion of phorboi 12- Reginald Paul
myristate-13-acetate-stimulated T lymphocytes to Brain stimulation using electromagnetic sources:
planar membranes containing intercellular theoretical aspects. Leon Heller and
adhesion molecule-1. Aydin Tézeren, David B. van Hulsteyn
Linda H. Mackie, Michael B. Lawrence,
Electrorotation and levitation of cells and colloidal
Po-Ying Chan, Michael L. Dustin, and
particles. Kenneth R. Foster, Friedrich A. Sauer,
Timothy A. Springer
and Herman P. Schwan
Membranes and Bilayers Photobiophysics
Chain-length dependence of lipid bilayer Simulations of the temperature dependence of
properties near the liquid crystal to gel phase energy transfer in the PSI core antenna.
transition. Michael R. Morrow, Yiwei Jia, John M. Jean, Melanie M. Werst,
John P. Whitehead, and Dalian Lu Chi-Kin Chan, and Graham R. Fleming
Contents
Spectroscopy, Imaging, Other Techniques turbidity observations: clot structure and
assembly are kinetically controlled.
A semi-empirical approach for the simulation of
John W. Weisel and Chandrasekaran Nagaswami
circular dichroism spectra of gramicidin A in a
model membrane. M. Carmen Bajid, Monomer diffusion and polymer alignment in
Lorenzo Braco, and Concepcién Abad domains of sickle hemoglobin. Michael R. Cho
and Frank A. Ferrone
Resonance Raman spectroscopic and kinetic
consequences of a nitrogen - - - sulphur
Muscle and Contractility
enzyme-substrate contact in a series of
dithioacylpapains. P. J. Tonge, B. Gour-Salin, Effect of small release on force during
P. Lachance, A. C. Storer, and P. R. Carey sarcomere-isometric tetani in frog muscle
Binding kinetics of an anti-dinitrophenyl fibers. A. Horowitz, H. P. M. Wussling, and
G. H. Pollack
monocional Fab on supported phospholipid
monolayers measured by total internal reflection Indo-1 binding to protein in permeabilized
with fluorescence photobleaching recovery. ventricular myocytes alters its spectral and Ca
Mary Lee Pisarchick, Diane Gesty, and binding properties. Leif Hove-Madsen and
Nancy L. Thompson Donald M. Bers
A quasi-elastic light scattering study of smooth
Proteins muscle myosin in the presence of ATP.
Xufeng Wu, Paul S. Blank, and Francis D. Carlson
Folding kinetics of designer proteins. Application
of the diffusion-collision model to a de novo Excitation-contraction coupling in intact frog
designed four-helix bundle. Kanthi K. Yapa and skeletal muscle fibers injected with mmolar
David L. Weaver concentrations of fura-2. S. Hollingworth,
A. B. Harkins, Nagomi Kurebayashi, M. Konishi,
Supramolecular Assemblies and S. M. Baylor
Computer modeling of fibrin polymerization
kinetics correlated with electron microscope and * Brief communication
Biophysical Journal Volume 63 December 1992
biophysical journal
august 1992
volume 63
number 2
contents
New Techniques Dimerization kinetics of the IgE-class antibodies
by divalent haptens. ll. The interactions between
Atomic force microscopy of three-dimensional
intact IgE and haptens.
membrane protein crystals. Ca-ATPase of
Reinhard Schweitzer-Stenner, Arieh Licht, and
sarcoplasmic reticulum. Jean-Jacques Lacapére,
Israel Pecht
David L. Stokes, and Didier Chatenay
Measuring local surface charge densities in
Photobiophysics
electrolyte solutions with a scanning force
microscope. Hans-Juirgen Butt Virtual intermediates in photosynthetic electron
transfer. Julian S. Joseph and William Bialek ..._ 397
Biophysical Theory
Oxygen diffusion-concentration product in
Long tail kinetics in biophysics?. John F. Nagle rhodopsin as observed by a pulse ESR spin
Protein dynamics and 1/f noise. labeling method. Witold K. Subczynski,
T. Gregory Dewey and James G. Bann Geofrey E. Renk, Rosalie K. Crouch,
James S. Hyde, and Akihiro Kusumi
Proteins and Biopolymers
Optical and physical properties of wet-spun films Muscle and Contractility
of Na-hyaluronate. Evidence of a phase
Evidence for structurally different attached states
transition. M.R. Flowers, R. L. Marlowe,
of myosin cross-bridges on actin during
S. A. Lee, N. Lavalle, and A. Rupprecht
contraction of fish muscle. Jeffrey J. Harford and
Formation of a square-planar Co(l) B,. John M. Squire
intermediate. Implications for enzyme catalysis.
Myosin light chain 2 modulates calcium-sensitive
Michael D. Wirt, Irit Sagi, and Mark R. Chance ...
cross-bridge transitions in vertebrate skeletal
Protein dynamics. Vibrational coupling, spectral muscle. Joseph M. Metzger and RichardL.Moss 460
broadening mechanisms, and anharmonicity
Theory of excitation-contraction coupling in
effects in carbonmonoxy heme proteins studied
cardiac muscle. Michael D. Stern
by the temperature dependence of the Soret band
lineshape. Antonella Di Pace, Antonio Cupane,
Maurizio Leone, Eugenio Vitrano, and Membranes
Lorenzo Cordone Nonmonotonic alterations in the fluorescence
'H Nuclear magnetic resonance investigation of anisotropy of poiar head group labeled
cobalt(II) substituted carbonic anhydrase. fluorophores during the lamellar to hexagonal
Lucia Banci, L. B. Dugad, Gerd N. La Mar, phase transition of phospholipids. Xianlin Han
Kelly A. Keating, Claudio Luchinat, and and Richard W. Gross
Roberta Pierattelli Spin-labeling studies of the conformation of the
Hydrogen peroxide plays a key role in the Ca?*-regulatory protein calmodulin in solution and
oxidation reaction of myoglobin by molecular bound to the membrane skeleton in erythrocyte
oxygen. A computer simulation. ghosts: Implications to transmembrane
Tetsu-ichi Wazawa, Ariki Matsuoka, signaling. Mary Anne Yacko and
Gen-ichi Tajima, Yoshiaki Sugawara, D. Allan Butiertield
Ken-ichi Nakamura, and Keiji Shikama Formation of a new stable phase of
Dimerization kinetics of the IgE-class antibodies phosphatidyiglycerols. Richard M. Epand,
by divalent haptens. |. The Fab-hapten Brent Gabel, Raquel F. Epand, Arindam Sen,
interactions. Reinhard Schweitzer-Stenner, Sek Wen Hui, Arturo Muga, and
Arieh Licht, and Israel Pecht Witold K. Surewicz
Contents
Determination of fluid and gel domain sizes in Classification of projection images of crystalline
two-component, two-phase lipid bilayers. An arrays of the mitochondrial, voltage-dependent
electron spin resonance spin label study. anion-selective channel embedded in
M. B. Sankaram, D. Marsh, and T. E. Thompson aurothioglucose. Xiao-Wei Guo and
Influence of the membrane surface on glycolipid Carmen A. Mannella
conformation and dynamics. An interpretation of Conformational model for ion permeation in
NMR results using conformational energy membrane channels: A comparison with multi-ion
calculations. BeAtrice G. Winsborrow, models and applications to calcium channel
Jean-Robert Brisson, lan C. P. Smith, and permeability. Sergej L. Mironov
Harold C. Jarrell 23Na and 'H NMR studies on melittin channels
Direct correlation of structure changes and activated by tricyclic tranquilizers. Hisao Tanaka,
thermal events in hydrated lipid established by Kohichi Matsunaga, and Hiroshi Kawazura
simultaneous calorimetry and time-resolved x-ray Mode of action of iberiotoxin, a potent blocker of
diffraction. Hesson Chung and Martin Caffrey ... the large conductance Ca?*-activated K*
Intermediates and kinetics of membrane fusion. channel. Sebastian Candia, Maria L. Garcia, and
Joe Bentz Ramon Latorre
Melittin-induced changes in lipid multilayers. A
solid-state NMR study. Ross Smith, Electrophysiology
Frances Separovic, Fiona C. Bennett, and Techniques for obtaining analytical solutions to
Bruce A. Cornell the multicylinder somatic shunt cable model for
Spatial variations in membrane properties in the passive neurones. J. D. Evans, G. C. Kember,
intact ratlens. G. J. Baldo and R. T. Mathias ... and G. Major
Oxygenation-deoxygenation cycle of erythrocytes Analysis of electric field stimulation of single
modulates submicron cell membrane cardiac muscle cells. Leslie Tung and
fluctuations. Shmuel Tuvia, Shlomo Levin, and Jean-René Borderies
Rafi Korenstein Magnetic and electric characteristics of the
electric fish Gymnotus carap6. Oswaldo Baffa
Channels and Sonia Lopes Cérrea
Properties of the mitochondrial peptide-sensitive
cationic channel studied in planar bilayers and
patches of giant liposomes. Michel Thieffry,
Jacques Neyton, Marc Pelleschi, Florence Févre,
and Jean-Pierre Henry * Brief communication
Biophysical Journal Volume 63 December 1992
biophysical journal
september 1992
volume 63
number 3
contents
Channels and Receptors flow immunofluorescence. Marjorie L. Longo,
Dihydropyridine-sensitive skeletal muscle Ca Alan Waring, and Joseph A. N. Zasadzinski
channels in polarized planar bilayers. 3. Effects of Conformation and elasticity of the isolated red
phosphorylation by protein kinase C. Jianjie Ma, blood cell membrane skeleton. Karel Svoboda,
Luis M. Gutiérrez, M. Marlene Hosey, and Christoph F. Schmidt, Daniel Branton, and
Eduardo Rios Steven M. Block
Na channels that remain open throughout the Quenching of fluorescein-conjugated lipids by
cardiac action potential plateau. Yuan-mou Liu, antibodies. Quantitative recognition and binding
Louis J. DeFelice, and Michele Mazzanti of lipid-bound hapiens in biomembrane models,
A method for estimation of drug affinity constants formation of two-dimensional protein domains and
to the open conformational state of calcium molecular dynamics simulations. M. Ahlers,
channels. E. N. Timin and S. Hering D. W. Grainger, J. N. Herron, K. Lim, H. Ringsdorf,
and C. Salesse
Prolines are not essential residues in the ‘‘barrel-
stave” model for ion channels induced by
Muscie and Cell Motility
alamethicin analogues. Hervé Duclohier,
Gérard Molle, Jean-Yves Dugast, and Cooperativity of thiol-modified myosin filaments.
Gérard Spach ATPase and motility assays of myosin function.
Douglas D. Root and Emil Reisler
Electrophysiology
Quantitation of liquid-crystalline ordering in F-actin
Pools of water in anhydrobiotic organisms. solutions. Chris M. Coppin and Paul C. Leavis 794
A thermally stimulated depolarization current Time-resolved x-ray diffraction study of the
study. Fabio Bruni and A. Carl Leopold troponin-associated reflexions from the frog
Simplified method for setting the phase angle for muscle. Yuichiro Maéda, David Popp, and
use in Capacitance measurements in studies of Alexander A. Stewart
exocytosis. Kenneth Zierler
Nucleic Acids
Membranes and Bilayers
The Nucleic Acid Database. A comprehensive
Modulation of lateral transport of membrane relational database of three-dimensional
components by spatial variations in diffusivity and structures of nucleic acids. Helen M. Berman,
solubility. Anthony de Beus and Josef Eisinger Wilma K. Olson, David L. Beveridge,
Computer detection of the rapid diffusion of John Westbrook, Anke Gelbin, Tamas Demeny,
fluorescent membrane fusion markers in images Shu-Hsin Hsieh, A. R. Srinivasan, and
observed with video microscopy. Walter D. Niles, Bohdan Schneider
Qing Li, and Fredric S. Cohen
Further evidence for closed, nonspherical Photobiophysics
aggregates in the cubic /, phase of lysolecithin and Kinetic analysis of the activation of transducin by
water. Gdran Lindblom, Lennart B.-A. Johansson,
photoexcited rhodopsin. Infiuence cf the lateral
Goran Wikander, Per-Olof Eriksson, and diffusion of transducin and competition of
Gosta Arvidson guanosine diphosphate and guanosine
Lipid bilayer surface association of lung surfactant triphosphate for the nucleotide site.
protein SP-B, amphipathic segment detected by Franz Bruckert, Marc Chabre, and T. Minh Vuong 616
Contents
Proteins and Biopolymers heme is a planar oscillator. Zygmunt Gryczynski,
Todd Tenenholz, and Enrico Bucci
Direct observation of defect structure in protein
crystals by atomic force and transmission electron Investigation of the structural determinants of the
microscopy. Genevieve Devaud, intrinsic fluorescence emission of the trp repressor
Paul S. Furcinitti, John C. Fleming, using single tryptophan mutants.
Mary K. Lyon, and Kenneth Douglas Catherine A. Royer
Quaternary structure and geminate recombination Conformational dynamics and intersubunit energy
in hemoglobin: flow-flash studies on a$°8, and transfer in wild-type and mutant lipoamide
a85°. Debkumar Bandyopadhyay, dehydrogenase from Azotobacter vinelandii.
Douglas Magde, T. G. Traylor, and A multidimensional time-resolved polarized
Vijay S. Sharma fluorescence study. Philippe |. H. Bastiaens,
Arie van Hoek, Jacques A. E. Benen,
Strong electrostatic loop-helix interactions in
Jean-Claude Brochon, and
bundle motif protein structures. Kuo-Chen Chou
Antonie J. W. G. Visser
and Chong Zheng
Vibrationally enhanced tunneling as a mechanism
Cell Surface Phenomena
for enzymatic hydrogen transfer.
William J. Bruno and William Bialek How do selectins mediate leukocyte rolling in
venules? Aydin Toézeren and Klaus Ley
Influence of sickle hemoglobin polymerization and
Interrupting autocrine ligand-receptor binding:
membrane properties on deformability of sickle
erythrocytes in the microcirculation. comparison between receptor blockers and ligand
Cheng Dong, Richard S. Chadwick, and decoys. Kimberly E. Forsten and
Alan N. Schechter Douglas A. Lauffenburger
Penetration of macromolecules into contracted
Cell Biophysics
blood clot. Maxim Yu. Matveyev and
Serguej P. Domogatsky Cytoplasmic calcium stimulates exocytosis in a
plant secretory cell. Robert Zorec and
Fluorescence Mark Tester
Rates of energy transfer between tryptophans
and hemes in hemoglobin, assuming that the * Brief communication
Biophysical Journal Volume 63 December 1992
biophysical journal
october 1992
volume 63
number 4
contents
SSOE NES TREE:
Biophysical Theory Molecular origin of the internal dipole potential in
lipid bilayers: calculation of the electrostatic
Confinement as a determinant of macromolecular
potential. Chong Zheng and Garret Vanderkooi
structure and reactivity. Allen P. Minton
Effects of the anesthetic dibucaine on the kinetics
of the gel-liquid crystalline transition of
Channels
dipalmitoyiphosphatidyicholine multilameliar
Limitations of the dual voltage clamp method in vesicies. William W. van Osdol, Qiang Ye,
assaying conductance and kinetics of gap junction Michael L. Johnson, and Rodney L. Biltonen
channels. Ronald Wilders and Habo J. Jongsma 942
Study of mechanisms of electric field-induced
Intra and extracellular surface charges near Ca** DNA transfection IV. Effects of DNA topology on
channels in neurons and neuroblastoma cells. cell uptake and transfection efficiency. T. D. Xie,
Andrea Becchetti, Annarosa Arcangeli, L. Sun, H. G. Zhao, J. A. Fuchs, and Tian Y. Tsong 1026
Maria Riccarda Del Bene, Massimo Olivotto,
Acyl chain conformational ordering in 1,2
and Enzo Wanke
dipalmitoylphosphatidylethanolamine. Integration
Coupling of water and potassium ions in K* of FT-IR and 2H NMR results. Mark Allen Davies,
channels of the tonoplast of Chara. Wigand Hubner, Alfred Blume,
Fabrice Homblé and Anne Aliénor Véry and Richard Mendelsohn
A-type potassium channel clusters revealed using Adenine nucleotide translocase greatly increases
a new statistical analysis of loose patch data. the partition of trinitrophenyl-ATP into reduced
Samuel S.-H. Wang and Stuart Thompson Triton X-100 micelles. Peter J. Tummino
Shaking stack model of ion conduction through and Ari Gafni
the Ca**-activated K* channel. Cholesterol in model membranes. A molecular
Mark F. Schumaker dynamics simulation. Olle Edholm and
Anna M. Nyberg
Electrophysiology The exocytotic fusion pore modeled asa lipidic
Effect of firing rate on the calcium permeability in pore. C. Nanavati, V. S. Markin,
adult neurons during spontaneous action A. F. Oberhauser, and J. M. Fernandez
potentials. Michele Mazzanti, Aurelio Galli, and Fatty-acid chain tilt angles and directions in
Arnaldo Ferroni dipalmitoyl phosphatidylcholine bilayers.
John Katsaras, Daniel S-C. Yang,
Evaluation of cellular mechanisms for modulation
of calcium transients using a mathematical model and Richard M. Epand
of fura-2 Ca?* imaging in Aplysia sensory Phosphatidyicholine: cholesterol phase
neurons. Hal Blumenfeld, Leonard Zablow, and diagrams. Jenifer L. Thewalt and Myer Bloom
Bernardo Sabatini
Membranes and Bilayers
Membranes Interfacial models of nerve fiber cytoskeleton.
Hydration at the membrane protein-lipid V. V. Malev, D. B. Gromov, Ya. Yu. Komissarchik,
interface. Cojen Ho and Christopher D. Stubbs and M. S. Brudnaya
E/M dips. Evidence for lipids regularly distributed
Muscle and Cell Motility
into hexagonal super-lattices in pyrene-PC/DMPC
binary mixtures at specific concentrations. Ciliary motion modeling, and dynamic multicilia
Daxin Tang and Parkson Lee-Gau Chong interactions. Shay Gueron and Nadav Liron ....
Contents
Muscle and Contractility Proteins
Orientational distribution of spin-labeled actin Rotational diffusion and intermolecular collisions
oriented by flow. &. Michael Ostap, of a spin labeled a-helical peptide determined by
Toshio Yanagida, and David D. Thomas electron spin echo spectroscopy.
Time-resolved tryptophan emission study of Siobhan M. Miick and Glenn L. Millhauser
cardiac troponin |. Ronglih Liao, Chein-Kao Polarization sensitive coherent anti-Stokes Raman
Wang, and Herbert C. Cheung scattering spectroscopy of the amide | band of
Studies on the structure of actin gels using time proteins in solutions. Andrey Yu. Chikishev,
correlation spectroscopy of fluorescent beads. Gerald W. Lucassen, Nikolai |. Koroteev,
Hong Qian, Elliot L. Elson, and Carl Frieden 1000 Cees Otto, and Jan Greve
A mosaic multiple-binding model for the binding of
Proteins and Biopolymers
caldesmon and myosin subfragment-1 to actin.
Yi-der Chen and Joseph M. Chalovich Measuring the microelastic properties of biological
material. N. J. Tao, S. M. Lindsay, and S. Lees
Photobiophysics
Supramolecular Assemblies
Kinetic model of primary energy transfer and
lon channels in icosahedral virus: a comparative
trapping in photosynthetic membranes.
analysis of the structures and binding sites at their
T6nu Pullerits and Arvi Freiberg
fivefold axes. Susana G. Kalko, Raul E. Cachau,
On the long-wavelength component of the light-
and Abelardo M. Silva
harvesting complex of some photosynthetic
bacteria. Monika R. Fischer and Arnold J. Hoff . . * Brief communication
Biophysica! Journal Volume 63 December 1992