Biophysical Chemistry 1997: Vol 65 Index

7 Pages·1997·1.6 MB·English

Biophysical
Chemistry
R Biophysical Chemistry 65 (1997) 235-236
Author Index to Volume 65
Arata, Y., see Price, W.S. (65) 179 Jordan, P.C., see Duca, K.A. (65) 123
Juang, E. and Peacock-Lépez, E.
Baginski, M., Gariboldi, P., Bruni, P. and Borowski, E. Steady state approximation in the minimal model of the
Conformational analysis of Amphotericin B (65) 91 alternative pathway of complement (65) 143
Blagoi, Yu., see Zozulya, V. (65) 55
Boden, N., Cheng, Y. and Knowles, P.F. Kikuchi, T.
Equilibrium and non-equilibrium conformations of peptides in Finite one-dimensional spin systems as models of biopolymers
lipid bilayers (65) 205 (65) 109
Borowski, E., see Baginski, M. (65) 91 Kimura, S., see Kitano, K. (65) 157
Bruni, P., see Baginski, M. (65) 91 Kinoshita, K., see Hatanaka, Y. (65) 229
Kitano, K., Nam, K.-Y., Kimura, S., Fujiki, H. and Imanishi, Y.
Chen, Y. and Wallace, B.A. Sealing effects of (—)-epigallocatechin gallate on protein ki-
Secondary solvent effects on the circular dichroism spectra of nase C and protein phosphatase 2A (65) 157
polypeptides in non-aqueous environments: influence of polar- Knowles, P.F., see Boden, N. (65) 205
isation effects on the far ultraviolet spectra of alamethicin (65) Kurzynski, M.
65 Protein machine model of enzymatic reactions gated by en-
Cheng, Y., see Boden, N. (65) 205 zyme internal dynamics (65) |
Chrzumnicka, E., see Ptak, A. (65) 165
Claire, K., Pecora, R. and Highsmith, S. Lober, G., see Zozulya, V. (65) 55
Skeletal muscle myosin subfragment | dimers (65) 85
Makitruk, V., see Zozulya, V. (65) 55
Duca, K.A. and Jordan, P.C.
Marangoni, A.G., Duplessis, P.M. and Yada, R.Y.
Jon—water and water—water interactions in a gramicidinlike
Kinetic model for carbon partitioning in Solanum tuberosum
channel: effects due to group polarizability and backbone
tubers stored at 2°C and the mechanism for low temperature
flexibility (65) 123
stress-induced accumulation of reducing sugars (65) 211
Duplessis, P.M., see Marangoni, A.G. (65) 211
Miki, Y., see Soda, K. (65) 45
Mortensen, K., see Sjéberg, B. (65) 75
Edholm, O., see Sandberg, L. (65) 189
Nam, K.-Y., see Kitano, K. (65) 157
Flesner, C.S., see Peacock-Lépez, E. (65) 171
Nara, M., see Price, W.S. (65) 179
Frackowiak, D., see Ptak, A. (65) 165
Nishizawa, T., see Soda, K. (65) 45
Fujiki, H., see Kitano, K. (65) 157
Gariboldi, P., see Baginski, M. (65) 91 Peacock-Lépez, E., Radov, D.B. and Flesner, C.S.
Guptasarma, P. Mixed-mode oscillations in a self-replicating dimerization
Resolving multiple protein conformers in equilibrium unfold- mechanism (65) 171
ing reactions: A time-resolved emission spectroscopic (TRES) Peacock-Lépez, E., see Juang, E. (65) 143
study of Azurin (65) 221 Pecora, R., see Claire, K. (65) 85
Planner, A., see Ptak, A. (65) 165
Hatanaka, Y., Kinoshita, K. and Yamazaki, M. Price, W.S., Nara, M. and Arata, Y.
Osmotic stress induces a phase transition from interdigitated A pulsed field gradient NMR study of the aggregation and
gel phase to bilayer gel phase in multilamellar vesicles of hydration of parvalbumin (65) 179
dihexadecylphosphatidylcholine (65) 229 Ptak, A., Chrzumnicka, E., Planner, A. and Frackowiak, D.
Highsmith, S., see Claire, K. (65) 85 Photoelectric properties of chlorophyll and carotene solutions
in nematic liquid crystal located between semiconducting elec-
Imanishi, Y., see Kitano, K. (65) 157 trodes (65) 165
236 Author Index to Volume 65
Radov, D.B., see Peacock-Lépez, E. (65) 171 Suezaki, Y.
A theory on the instability of tubular membranes to the
Sadana, A. and Sutaria, M. periodic conformation by laser tweezers (65) 101
Influence of diffusion to fractal surfaces on the binding kinet- Sutaria, M., see Sadana, A. (65) 29
ics for antibody—antigen, analyte—receptor, and analyte—recep-
torless (protein) systems (65) 29
Voloshin, I., see Zozulya, V. (65) 55
Sandberg, L. and Edholm, O.
pK, calculations along a bacteriorhodopsin molecular dynam-
ics trajectory (65) 189 Wallace, B.A., see Chen, Y. (65) 65
Seki, Y., see Soda, K. (65) 45 Winter, S., see Zozulya, V. (65) 55
Shalamay, A., see Zozulya, V. (65) 55
Sj6berg, B. and Mortensen, K.
Yada, R.Y., see Marangoni, A.G. (65) 211
Structure and thermodynamics of nonideal solutions of col-
Yamazaki, M., see Hatanaka, Y. (65) 229
loidal particles: Investigation of salt-free solutions of human
serum albumin by using small-angle neutron scattering and
Monte Carlo simulation (65) 75 Zozulya, V., Blagoi, Yu., Lober, G., Voloshin, I., Winter, S.,
Soda, K., Miki, Y., Nishizawa, T. and Seki, Y. Makitruk, V. and Shalamay, A.
New method for incorporating solvent influence into the eval- Fluorescence and binding properties of phenazine derivatives
uation of X-ray scattering intensity of proteins in solution (65) in complexes with polynucleotides of various base composi-
45 tions and secondary structures (65) 55
Biophysical
Chemistry
vis wt
ELSEVIER
Biophysical Chemistry 65 (1997) 237-240
Subject Index to Volume 65
Aggregation B-carotene
Diffusion; Hydration; Parvalbumin; Pulsed field gradient NMR Chlorophyll; Nematic liquid crystal; Photocurrent; Photopotential
(Price, W.S. (65) 179) (Ptak, A. (65) 165)
Alternative initiation pathway Chlorophyll
Complement; Minimal model; Steady state approximation (Juang, B-carotene; Nematic liquid crystal; Photocurrent; Photopotential
E. (65) 143) (Ptak, A. (65) 165)
AMI Complement
Amphotericin B; Conformational analysis; Molecular mechanics; Alternative initiation pathway; Minimal model; Steady state ap-
MM2; NMR nuclear Overhauser effects (Baginski, M. (65) 91) proximation (Juang, E. (65) 143)
Amphotericin B Conformational analysis
Conformational analysis; Molecular mechanics; MM2; AMI; Amphotericin B; Molecular mechanics; MM2; AM1; NMR nu-
NMR nuclear Overhauser effects (Baginski, M. (65) 91) clear Overhauser effects (Baginski, M. (65) 91)
Antibody—antigen, analyte—receptor, and analyte—receptorless Conformational transition
(protein) systems FT-IR spectroscopy; Secondary structure; Bilayers; Peptides
Binding kinetics; Diffusion; Fractal surfaces (Sadana, A. (65) 29) (Boden, N. (65) 205)
ATPase Conformational transitions
ATP; Dimerization; Light scattering; Myosin subfragment 1 Reaction rate theory; Enzymatic catalysis; Protein dynamics; Pro-
(Claire, K. (65) 85) tein machine model (Kurzyfski, M. (65) 1)
ATP Dielectric constant
ATPase; Dimerization; Light scattering; Myosin subfragment | Secondary structures; Membrane proteins; Non-aqueous solvents;
(Claire, K. (65) 85) Solvent polarity; Spectroscopy (Chen, Y. (65) 65)
Bending moduli Diffusion
Tubular membrane; Peristaltic state; Pearling instability (Suezaki, Aggregation; Hydration; Parvalbumin; Pulsed field gradient NMR
Y. (65) 101) (Price, W.S. (65) 179)
Bilayers Antibody—antigen, analyte—receptor, and analyte—receptorless
FT-IR spectroscopy; Secondary structure; Conformational transi- (protein) systems; Binding kinetics; Fractal surfaces (Sadana, A.
tion; Peptides (Boden, N. (65) 205) (65) 29)
Binding kinetics Dimerization
Antibody—antigen, analyte-receptor, and analyte—receptorless ATP; ATPase; Light scattering; Myosin subfragment | (Claire, K.
(protein) systems; Diffusion; Fractal surfaces (Sadana, A. (65) 29) (65) 85)
Biopolymers Dye fluorescence lifetime
Protein folding; Spin systems; Monte Carlo; Simulation; Frustra- Phenazines; Dye—nucleic acid interaction; Polarized fluorescence
tion; Two-state transition (Kikuchi, T. (65) 109) (Zozulya, V. (65) 55)
238 Subject Index to Volume 65
Dye—nucleic acid interaction Human serum albumin
Phenazines; Polarized fluorescence; Dye fluorescence lifetime Nonideal solutions; Small-angle neutron scattering; Monte Carlo
(Zozulya, V. (65) 55) simulation (Sjéberg, B. (65) 75)
Electrostatics Hydration
Fluctuations; Internal water; Protonation; Poisson—Boltzmann; Aggregation; Diffusion; Parvalbumin; Pulsed field gradient NMR
FDPB method (Sandberg, L. (65) 189) (Price, W.S. (65) 179)
Enzymatic catalysis Interdigitated gel phase
Reaction rate theory; Protein dynamics; Conformational transi- Phospholipid membranes; Phase transition; X-ray diffraction; Os-
tions; Protein machine model (Kurzynski, M. (65) 1) motic stress; Poly(ethylene glycol) (Hatanaka, Y. (65) 229)
(—)-Epigallocatechin gallate
Internal water
Protein kinase C; Protein phosphatase 2A; Lipid membrane; Tu-
Electrostatics; Fluctuations; Protonation; Poisson—Boltzmann;
mor promotion; 12-O-tetradecanoylphorbol-13-acetate; Okadaic
FDPB method (Sandberg, L. (65) 189)
acid (Kitano, K. (65) 157)
Invertase
FDPB method
Sucrose; Glucose; Fructose; Respiration; Glycolysis; Starch degra-
Electrostatics; Fluctuations; Internal water; Protonation; Poisson—
dation; Potatoes (Marangoni, A.G. (65) 211)
Boltzmann (Sandberg, L. (65) 189)
Fluctuations Light scattering
Electrostatics; Internal water; Protonation; Poisson—Boltzmann: ATP; ATPase; Dimerization; Myosin subfragment | (Claire, K.
(65) 85)
FDPB method (Sandberg, L. (65) 189)
Fluorescence decay time-resolved emission Lipid membrane
Protein conformation; Protein folding; Structural intermediates (—)-Epigallocatechin gallate; Protein kinase C; Protein phos-
(Guptasarma, P. (65) 221) phatase 2A; Tumor promotion; 12-O0-tetradecanoylphorbol-13-
acetate; Okadaic acid (Kitano, K. (65) 157)
Fractal surfaces
Antibody—antigen, analyte—receptor, and analyte—receptorless Membrane fluidity
(protein) systems; Binding kinetics; Diffusion (Sadana, A. (65) Model channel; Gramicidin; Polarizability (Duca, K.A. (65) 123)
29)
Membrane proteins
Fructose Secondary structures; Non-aqueous solvents; Dielectric constant;
Sucrose; Glucose; Invertase; Respiration; Glycolysis; Starch Solvent polarity; Spectroscopy (Chen, Y. (65) 65)
degradation; Potatoes (Marangoni, A.G. (65) 211)
Minimal model
Frustration
Alternative initiation pathway; Complement; Steady state approxi-
Biopolymers; Protein folding; Spin systems; Monte Carlo; Simula- mation (Juang, E. (65) 143)
tion; Two-state transition (Kikuchi, T. (65) 109)
Mixed-mode oscillations
FT-IR spectroscopy
Self-replicating dimerization mechanism (Peacock-Lépez, E. (65)
Secondary structure; Conformational transition; Bilayers; Peptides
171)
(Boden, N. (65) 205)
Glucose MM2
Sucrose; Fructose; Invertase; Respiration; Glycolysis; Starch Amphotericin B; Conformational analysis; Molecular mechanics;
degradation; Potatoes (Marangoni, A.G. (65) 211) AM1; NMR nuclear Overhauser effects (Baginski, M. (65) 91)
Glycolysis Modei channel
Sucrose; Glucose; Fructose; Invertase; Respiration; Starch degra- Gramicidin; Polarizability; Membrane fluidity (Duca, K.A. (65)
dation; Potatoes (Marangoni, A.G. (65) 211) 123)
Gramicidin Molecular mechanics
Model channel; Polarizability; Membrane fluidity (Duca, K.A. Amphotericin B; Conformational analysis; MM2; AM1; NMR
(65) 123) nuclear Overhauser effects (Baginski, M. (65) 91)
Subject Index to Volume 65
Monte Carlo simulation Phase transition
Nonideal solutions; Small-angle neutron scattering; Human serum Interdigitated gel phase; Phospholipid membranes; X-ray diffrac-
albumin (Sjéberg, B. (65) 75) tion; Osmotic stress; Poly(ethylene glycol) (Hatanaka, Y. (65)
229)
Monte Carlo
Biopolymers; Protein folding; Spin systems; Simulation; Frustra- Phenazines
tion; Two-state transition (Kikuchi, T. (65) 109) Dye—nucleic acid interaction; Polarized fluorescence; Dye fluores-
cence lifetime (Zozulya, V. (65) 55)
Myosin subfragment 1
ATP; ATPase; Dimerization; Light scattering (Claire, K. (65) 85)
Phospholipid membranes
Interdigitated gel phase; Phase transition; X-ray diffraction; Os-
Nematic liquid crystal motic stress; Poly(ethylene glycol) (Hatanaka, Y. (65) 229)
B-carotene; Chlorophyll; Photocurrent; Photopotential (Ptak, A.
(65) 165)
Photocurrent
B-carotene; Chlorophyll; Nematic liquid crystal; Photopotential
NMR nuclear Overhauser effects
(Ptak, A. (65) 165)
Amphotericin B; Conformational analysis; Molecular mechanics;
MM2; AMI (Baginski, M. (65) 91)
Photopotential
B-carotene; Chlorophyll; Nematic liquid crystal; Photocurrent
Non-aqueous solvents
(Ptak, A. (65) 165)
Secondary structures; Membrane proteins; Dielectric constant;
Solvent polarity; Spectroscopy (Chen, Y. (65) 65)
Poisson—Boltzmann
Nonideal solutions Electrostatics; Fluctuations; Internal water; Protonation; FDPB
Small-angle neutron scattering; Monte Carlo simulation; Human method (Sandberg, L. (65) 189)
serum albumin (Sjéberg, B. (65) 75)
Polarizability
Okadaic acid Model channel; Gramicidin; Membrane fluidity (Duca, K.A. (65)
(—)-Epigallocatechin gallate; Protein kinase C; Protein phos- 123)
phatase 2A; Lipid membrane; Tumor promotion; 12-O-tetrade-
canoylphorbol-13-acetate (Kitano, K. (65) 157) Polarized fluorescence
Phenazines; Dye—nucleic acid interaction; Dye fluorescence life-
Osmotic stress time (Zozulya, V. (65) 55)
Interdigitated gel phase; Phospholipid membranes; Phase transi-
tion; X-ray diffraction; Poly(ethylene glycol) (Hatanaka, Y. (65) Poly(ethylene glycol)
229) Interdigitated gel phase; Phospholipid membranes; Phase transi-
tion; X-ray diffraction; Osmotic stress (Hatanaka, Y. (65) 229)
12-O0-tetradecanoylphorbol-13-acetate
(—)-Epigallocatechin gallate; Protein kinase C; Protein phos-
Potatoes
phatase 2A; Lipid membrane; Tumor promotion; Okadaic acid
Sucrose; Glucose; Fructose; Invertase; Respiration; Glycolysis;
(Kitano, K. (65) 157)
Starch degradation (Marangoni, A.G. (65) 211)
Parvalbumin
Protein conformation
Aggregation; Diffusion; Hydration; Pulsed field gradient NMR
Fluorescence decay time-resolved emission; Protein folding:
(Price, W.S. (65) 179)
Structural intermediates (Guptasarma, P. (65) 221)
Pearling instability
Tubular membrane; Bending moduli; Peristaltic state (Suezaki, Y. Protein dynamics
(65) 101) Reaction rate theory; Enzymatic catalysis; Conformational transi-
tions; Protein machine model (Kurzyfiski, M. (65) 1)
Peptides
FT-IR spectroscopy; Secondary structure; Conformational transi- Protein folding
tion; Bilayers (Boden, N. (65) 205) Biopolymers; Spin systems; Monte Carlo; Simulation; Frustration;
Two-state transition (Kikuchi, T. (65) 109)
Peristaltic state
Tubular membrane; Bending moduli; Pearling instability (Suezaki, Fluorescence decay time-resolved emission; Protein conformation;
Y. (65) 101) Structural intermediates (Guptasarma, P. (65) 221)
240 Subject Index to Volume 65
Protein kinase C Solvent polarity
(—)-Epigallocatechin gallate; Protein phosphatase 2A; Lipid Secondary structures; Membrane proteins; Non-aqueous solvents;
membrane; Tumor promotion; 12-O-tetradecanoylphorbol-13- Dielectric constant; Spectroscopy (Chen, Y. (65) 65)
acetate; Okadaic acid (Kitano, K. (65) 157)
Spectroscopy
Protein machine model Secondary structures; Membrane proteins; Non-aqueous solvents;
Reaction rate theory; Enzymatic catalysis; Protein dynamics; Con- Dielectric constant; Solvent polarity (Chen, Y. (65) 65)
formational transitions (Kurzyfski, M. (65) 1)
Spin systems
Protein phosphatase 2A Biopolymers; Protein folding; Monte Carlo; Simulation; Frustra-
(—)-Epigallocatechin gallate; Protein kinase C; Lipid membrane; tion; Two-state transition (Kikuchi, T. (65) 109)
Tumor promotion; 12-O-tetradecanoylphorbol-|3-acetate; Okadaic
acid (Kitano, K. (65) 157) Starch degradation
Sucrose; Glucose; Fructose; Invertase; Respiration; Glycolysis;
Protonation Potatoes (Marangoni, A.G. (65) 211)
Electrostatics; Fluctuations; Internal water; Poisson—Boltzmann;
FDPB method (Sandberg, L. (65) 189) Steady state approximation
Alternative initiation pathway; Complement; Minimal model
(Juang, E. (65) 143)
Pulsed field gradient NMR
Aggregation; Diffusion; Hydration; Parvalbumin (Price, W.S. (65)
Structural intermediates
179)
Fluorescence decay time-resolved emission; Protein conformation;
Protein folding (Guptasarma, P. (65) 221)
Reaction rate theory
Enzymatic catalysis; Protein dynamics; Conformational transi-
Sucrose
tions; Protein machine model (Kurzynski, M. (65) 1)
Glucose; Fructose; Invertase; Respiration; Glycolysis; Starch
degradation; Potatoes (Marangoni, A.G. (65) 211)
Respiration
Sucrose; Glucose; Fructose; Invertase; Glycolysis; Starch degrada-
Surface integration
tion; Potatoes (Marangoni, A.G. (65) 211)
X-ray scattering; Solvent influence (Soda, K. (65) 45)
Secondary structure
Tubular membrane
FT-IR spectroscopy; Conformational transition; Bilayers; Pep-
Bending moduli; Peristaltic state; Pearling instability (Suezaki, Y.
tides (Boden, N. (65) 205)
(65) 101)
Secondary structures Tumor promotion
Membrane proteins; Non-aqueous solvents; Dielectric constant; (—)-Epigallocatechin gallate; Protein kinase C; Protein phos-
Solvent polarity; Spectroscopy (Chen, Y. (65) 65)
phatase 2A; Lipid membrane; 12-O-tetradecanoylphorbol-13-
acetate; Okadaic acid (Kitano, K. (65) 157)
Self-replicating dimerization mechanism
Mixed-mode oscillations (Peacock-Lépez, E. (65) 171) Two-state transition
Biopolymers; Protein folding; Spin systems; Monte Carlo; Simula-
Simulation tion; Frustration (Kikuchi, T. (65) 109)
Biopolymers; Protein folding; Spin systems; Monte Carlo; Frustra-
tion; Two-state transition (Kikuchi, T. (65) 109) X-ray diffraction
Interdigitated gel phase; Phospholipid membranes; Phase transi-
Small-angle neutron scattering tion; Osmotic stress; Poly(ethylene glycol) (Hatanaka, Y. (65)
Nonideal solutions; Monte Carlo simulation; Human serum albu- 229)
min (Sjoberg, B. (65) 75)
X-ray scattering
Solvent influence Solvent influence; Surface integration (Soda, K. (65) 45)
X-ray scattering; Surface integration (Soda, K. (65) 45)
Rates