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Biocalorimetry: foundations and contemporary approaches PDF

412 Pages·2016·12.294 MB·English
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Biocalorimetry Foundations and Contemporary Approaches TThhiiss ppaaggee iinntteennttiioonnaallllyy lleefftt bbllaannkk Biocalorimetry Foundations and Contemporary Approaches Edited by Margarida Bastos Department of Chemistry & Biochemistry Faculty of Sciences, University of Porto Boca Raton London New York CRC Press is an imprint of the Taylor & Francis Group, an informa business CRC Press Taylor & Francis Group 6000 Broken Sound Parkway NW, Suite 300 Boca Raton, FL 33487-2742 © 2016 by Taylor & Francis Group, LLC CRC Press is an imprint of Taylor & Francis Group, an Informa business No claim to original U.S. Government works Version Date: 20151214 International Standard Book Number-13: 978-1-4822-4666-7 (eBook - PDF) This book contains information obtained from authentic and highly regarded sources. Reasonable efforts have been made to publish reliable data and information, but the author and publisher cannot assume responsibility for the valid- ity of all materials or the consequences of their use. The authors and publishers have attempted to trace the copyright holders of all material reproduced in this publication and apologize to copyright holders if permission to publish in this form has not been obtained. If any copyright material has not been acknowledged please write and let us know so we may rectify in any future reprint. Except as permitted under U.S. Copyright Law, no part of this book may be reprinted, reproduced, transmitted, or uti- lized in any form by any electronic, mechanical, or other means, now known or hereafter invented, including photocopy- ing, microfilming, and recording, or in any information storage or retrieval system, without written permission from the publishers. For permission to photocopy or use material electronically from this work, please access www.copyright.com (http:// www.copyright.com/) or contact the Copyright Clearance Center, Inc. (CCC), 222 Rosewood Drive, Danvers, MA 01923, 978-750-8400. CCC is a not-for-profit organization that provides licenses and registration for a variety of users. For organizations that have been granted a photocopy license by the CCC, a separate system of payment has been arranged. Trademark Notice: Product or corporate names may be trademarks or registered trademarks, and are used only for identification and explanation without intent to infringe. Visit the Taylor & Francis Web site at http://www.taylorandfrancis.com and the CRC Press Web site at http://www.crcpress.com To my children Rita and Tiago and my grandson Tomás. TThhiiss ppaaggee iinntteennttiioonnaallllyy lleefftt bbllaannkk Contents Preface, xi Contributors, xiii Section i Introduction: Historical and Methodological Context chapter 1 ◾ Introduction 3 Margarida BaStoS chapter 2 ◾ From Classical Thermochemistry to Monitoring of Living Organisms 17 ingeMar WadSö chapter 3 ◾ A Journey in the Land of Biocalorimetry: A Quest for Knowledge 41 Lee d. hanSen chapter 4 ◾ An Odyssey in Calorimetric Development: From Past to Future 63 Jaak SuurkuuSk, MaLin SuurkuuSk, and peter Vikegard chapter 5 ◾ Enzyme-Catalyzed Reactions 79 roBert n. goLdBerg Section ii Membrane Characterization and Partition to Membranes chapter 6 ◾ Temperature-Induced and Isothermal Phase Transitions of Pure and Mixed Lipid Bilayer Membranes Studied by DSC and ITC 103 aLfred BLuMe vii viii ◾ Contents chapter 7 ◾ Thermotropic Properties of Ceramides in Aqueous or Lipidic Environments 137 aLicia aLonSo and feLix M. goñi chapter 8 ◾ Peptide–Membrane Interactions Studied by Isothermal Titration Calorimetry 153 JohanneS kLingLer and Sandro keLLer chapter 9 ◾ DSC Studies on the Modulation of Membrane Lipid Polymorphism and Domain Organization by Antimicrobial Peptides 169 karL Lohner chapter 10 ◾ Kinetics of the Interaction of Amphiphiles with Lipid Bilayers Using ITC 191 patrícia a. t. MartinS and Maria João Moreno Section iii Nucleic Acids and Proteins: Stability and Their Interactions with Ligands chapter 11 ◾ Calorimetry of DNA: Energetic Basis of the Double Helix 209 peter L. priVaLoV chapter 12 ◾ Allostery and Cooperative Interactions in Proteins Assessed by Isothermal Titration Calorimetry 223 adrian VeLazquez-caMpoy chapter 13 ◾ Protein Stability in Crowded Environments 247 MichaeL SenSke, SiMon eBBinghauS, and chriStian herrMann chapter 14 ◾ Isothermal Titration Calorimetry and Fluorescent Thermal and Pressure Shift Assays in Protein–Ligand Interactions 261 VytautaS petrauSkaS, Lina BaranauSkien˙e, aSta zuBrien˙e, and dauMantaS MatuLiS chapter 15 ◾ Joining Thermodynamics and Kinetics by kinITC 281 phiLippe duMaS chapter 16 ◾ Calorimetric Approaches to Studying Complex Protein Structure–Function–Stability Relationships in Conformational Diseases: The Case of Cystathionine β-Synthase 301 angeL L. pey, toMaS MaJtan, and Jan p. krauS Contents   ◾   ix Section iV Calorimetry as a Tool in Applied Fields chapter 17 ◾ A n Account in Calorimetric Research: From Fundamentals to Pharmaceuticals 323 patrick conneLLy chapter 18 ◾ C alorimetry for Monitoring Mixed Bacterial Populations and Biofilms 345 SiMon gaiSford chapter 19 ◾ I sothermal Microcalorimetry for the Investigation of Clinical Samples: Past and Present 363 oLiVier BraiSSant, gernot Bonkat, and aLexander BachMann chapter 20 ◾ C alorimetric Assays for Heterogeneous Enzyme Catalysis: Hydrolysis of Cellulose and Biomass 381 peter WeSth and kiM Borch INDEX, 395

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