Epigenetic Attenuation of Mitochondrial Superoxide Dismutase 2 in Pulmonary Arterial Hypertension. A Basis for Excessive Cell Proliferation and a New Therapeutic Target Stephen L. Archer, Glenn Marsboom, Gene H. Kim, Hannah J. Zhang, Peter T. Toth, Eric C. Svensson, Jason R.B. Dyck, Mardi Gomberg-Maitland, Bernard Thébaud, Aliya N. Husain, Nicole Cipriani and Jalees Rehman Circulation published online Jun 7, 2010; DOI: 10.1161/CIRCULATIONAHA.109.916098 Circulation is published by the American Heart Association. 7272 Greenville Avenue, Dallas, TX 72514 Copyright © 2010 American Heart Association. All rights reserved. Print ISSN: 0009-7322. Online ISSN: 1524-4539 The online version of this article, along with updated information and services, is located on the World Wide Web at: http://circ.ahajournals.org Data Supplement (unedited) at: http://circ.ahajournals.org/cgi/content/full/CIRCULATIONAHA.109.916098/DC1 Subscriptions: Information about subscribing to Circulation is online at http://circ.ahajournals.org/subscriptions/ Permissions: Permissions & Rights Desk, Lippincott Williams & Wilkins, a division of Wolters Kluwer Health, 351 West Camden Street, Baltimore, MD 21202-2436. Phone: 410-528-4050. Fax: 410-528-8550. E-mail: [email protected] Reprints: Information about reprints can be found online at http://www.lww.com/reprints Downloaded from circ.ahajournals.org at UNIV OF CHICAGO LIBRARY on June 8, 2010 Epigenetic Attenuation of Mitochondrial Superoxide Dismutase 2 in Pulmonary Arterial Hypertension A Basis for Excessive Cell Proliferation and a New Therapeutic Target Stephen L. Archer, MD; Glenn Marsboom, PhD; Gene H. Kim, MD; Hannah J. Zhang, PhD; Peter T. Toth, PhD; Eric C. Svensson, MD, PhD; Jason R.B. Dyck, PhD; Mardi Gomberg-Maitland, MD; Bernard The´baud, MD; Aliya N. Husain, MD; Nicole Cipriani, MD; Jalees Rehman, MD Background—Excessive proliferation and impaired apoptosis of pulmonary artery (PA) smooth muscle cells (PASMCs) contribute to vascular obstruction in patients and fawn-hooded rats (FHRs) with PA hypertension (PAH). Expression andactivityofmitochondrialsuperoxidedismutase-2(SOD2),themajorgeneratorofH O ,isknowntobereducedin 2 2 PAH; however, the mechanism and therapeutic relevance of this are unknown. MethodsandResults—SOD2expressioninPASMCsisdecreasedinPAHpatientsandFHRswithPAH.FHRPASMCs havehigherproliferationandlowerapoptosisratesthanSprague-DawleyratPASMCs.Moreover,FHRPASMCshave hyperpolarized mitochondria, low H O production, and reduced cytoplasmic and mitochondrial redox state. Admin- 2 2 istration of SOD2 small interfering RNA to normal PASMCs recapitulates the FHR PAH phenotype, hyperpolarizing mitochondria,decreasingH O ,andinhibitingcaspaseactivity.Conversely,SOD2overexpressioninFHRPASMCsor 2 2 therapy with the SOD-mimetic metalloporphyrin Mn(III)tetrakis (4-benzoic acid) porphyrin (MnTBAP) reverses the hyperproliferative PAH phenotype. Importantly, SOD-mimetic therapy regresses PAH in vivo. Investigation of the SOD2 gene revealed no mutation, suggesting a possible epigenetic dysregulation. Genomic bisulfite sequencing demonstratesselectivehypermethylationofaCpGislandinanenhancerregionofintron2andanotherinthepromoter. Differential methylation occurs selectively in PAs versus aortic SMCs and is reversed by the DNA methyltransferase inhibitor5-aza-2(cid:1)-deoxycytidine,restoringbothSOD2expressionandtheratioofproliferationtoapoptosis.Expression of the enzymes that mediate gene methylation, DNA methyltransferases 1 and 3B, is upregulated in FHR lungs. Conclusions—Tissue-specific,epigeneticSOD2deficiencyinitiatesandsustainsaheritableformofPAHbyimpairingredox signaling and creating a proliferative, apoptosis-resistant PASMC. SOD augmentation regresses experimental PAH. The discoveryofanepigeneticcomponenttoPAHmayoffernewtherapeutictargets. (Circulation.2010;121:2661-2671.) Key Words: epigenesis, genetic (cid:1) gene silencing (cid:1) hypoxia-inducible factor-1, (cid:1)subunit (cid:1) hypertension, pulmonary (cid:1) mitochondrial diseases (cid:1) oxidation-reduction (cid:1) superoxide dismutase 2 Pulmonaryartery(PA)hypertension(PAH)isasyndrome musclecell(PASMC),asreviewedelsewhere.1Althoughthis inwhichobstructed,constrictedsmallPAsandincreased study focuses on PASMCs, many cell types are abnormal in pulmonary vascular resistance ultimately lead to right ven- PAH. There is infiltration of the lung with inflammatory tricular hypertrophy and failure. Despite important advances cells, disorganized endothelial proliferation in plexiform inunderstandingthemechanismofPAH,suchasthediscov- lesions, activation of myofibroblasts, and disruption of the ery of mutations in bone morphogenetic protein receptors in extracellularmatrix.Theanimalmodelusedinthisstudy(the familialPAH,andtheadventofeffectiveoraltherapies,such fawn-hoodedrat[FHR])developsspontaneousPAH,charac- asphosphodiesterase-5inhibitorsandendothelinantagonists, terized by excessive proliferation and impaired apoptosis of mortality remains high (15% at 1 year). thePASMCs;therefore,thismodelisusefulforstudyingthe Clinical Perspective on p 2671 roleofPASMCsinPAH.Moreover,FHRssharewithhuman PAH may be viewed in part as a disease of excess PAH PASMCs a disrupted mitochondrial network and low proliferation and impaired apoptosis of the PA smooth expression and activity of superoxide dismutase-2 (SOD2).2 ReceivedOctober15,2009;acceptedApril12,2010. FromtheDepartmentsofMedicine(S.L.A.,G.M.,G.H.K.,H.J.Z.,P.T.T.,E.C.S.,M.G.-M.,J.R.)andPathology(A.N.H.,N.C.),SectionofCardiology, UniversityofChicago,Chicago,Ill,andDepartmentsofPharmacology(J.R.B.D.)andPediatrics(B.T.),UniversityofAlberta,Edmonton,Alberta,Ontario,Canada. Theonline-onlyDataSupplementisavailablewiththisarticleathttp://circ.ahajournals.org/cgi/content/full/CIRCULATIONAHA.109.916098/DC1. CorrespondencetoStephenL.Archer,MD,FAHA,FACC,FRCP(C),HaroldHinesJr.ProfessorofMedicine,ChiefofCardiology,Universityof Chicago,5841SMarylandAve,MC6080,Chicago,[email protected] ©2010AmericanHeartAssociation,Inc. Circulationisavailableathttp://circ.ahajournals.org DOI:10.1161/CIRCULATIONAHA.109.916098 Downloaded from circ.ahajournals.org at U2N6I6V1 OF CHICAGO LIBRARY on June 8, 2010 2662 Circulation June 22, 2010 The proliferation/apoptosis imbalance in PAH suggests 5-minuteacquisitionperiodwerequantifiedbymeasuringthepeak similarities to cancer,3 although it should be noted that heightofelectronparamagneticresonancetripletsignal,ameasure of3-methoxycarbonyl-proxylnitroxidekinetics. endothelialcellsandPASMCsdonotinvadethesurrounding tissue or metastasize. Nevertheless, FHR PAH and certain Enhanced Chemiluminescence cancers share a metabolic profile that creates a “pseudohy- ThePAwasincubatedinL-012(100(cid:2)mol/Lfor30minutesat37°C; poxic” cellular environment that favors proliferation. Rele- WakoChemicals,Richmond,VA),asuperoxide-sensitivechemilu- vant abnormalities include decreased SOD2,2,4 normoxic minescenceenhancerthatdoesnotundergoredoxcycling.2 activation of the transcription factor hypoxia-inducible factor-1(cid:1) (HIF-1(cid:1)),2,5,6 and HIF-1(cid:1)–induced activation of Amplex Red MeasurementofH O productionwasperformedinPASMCorPA pyruvate dehydrogenase kinase,2,7 which inhibits the Krebs 2 2 ringswiththefluorometricAmplexRedassay.2 cycle, shifting metabolism toward glycolysis.2,7 As a conse- quence, electron flux is reduced, and generation of reactive Immunoblotting and Immunofluorescence oxygen species (ROS) in the mitochondria decreases. Immunoblottingwasperformedon25(cid:2)gproteinpooledfromn(cid:3)3 ThereisevidencethatimplicatesSOD2inthedevelopment fourthdivisionPAsorisolatedPASMCs(seetheonline-onlyData of idiopathic PAH. SOD2 downregulation precedes PAH in Supplement).2 FHRs.2 In rats, the SOD2 gene is located on chromosome 1 Small Interfering RNA and FH-BN1 consomic rats (identical to FHRs except they PASMCs were grown to (cid:2)50% confluence and then exposed to have introgression of a normal chromosome 1) do not anti-SOD2 small interfering RNA (siRNA). Several “on-target” developPAH.2Likewise,inhumanPAH,SOD2deficiencyis siRNAs(AppliedBiosystems,FosterCity,Calif)weretested,and notedinPAsandplexiformlesions.2,4Biologicalplausibility the optimal dose to achieve maximal knockdown with minimal for a causal role for SOD2 is supported by the recent toxicity was established. For each experiment, there was a scrambled siRNA control. Details are given in the online-only recognition that SOD2 is a putative tumor-suppressor gene Data Supplement. andthatepigeneticsilencingofSOD2increasesproliferation of cancer cells.8,9 Replication-Deficient Adenoviruses SOD2 is the gatekeeper that regulates physiological pro- FHRPASMCswereinfectedwithserotype5recombinantadenovi- duction of H O (produced from mitochondrial superoxide rus carrying the human SOD2 gene under a cytomegalovirus 2 2 duringrespiration).H O islesstoxicthansuperoxide,andits promoterasdescribed2(seetheonline-onlyDataSupplement). 2 2 greater diffusion radius allows it to serve as a signaling Redox-Sensitive Green Fluorescence molecule.H O modulatestheactivityoftranscriptionfactors 2 2 Protein Constructs such as HIF-1(cid:1)(which it inhibits)10,11 and sulfhydryl rich Redox-sensitivegreenfluorescenceprotein(GFP)constructs(roGFP2) proteins, including the voltage-gated potassium channel targeted to either the cytoplasm or mitochondria (a kind gift of Dr Kv1.512 (which it activates). Because FHR PAH is heritable Remington,UniversityofOregon)weretransfectedintoPASMCswith and yet sequencing showed that the SOD2 gene has no the Fugene HD transfection reagent (Roche, Basel, Switzerland). By mutations, we hypothesized that epigenetic suppression of usingdifferentexcitationwavelengths(400and490nm)andmeasuring emissionat535nm,weassessedtheredoxstatusofcells(thegreater SOD2 may initiate and/or sustain PAH. We report here that lightemission,themoreoxidizedthePASMCs).13 selectivehypermethylationofCpGislandsintheSOD2gene promotes a proliferative, antiapoptotic phenotype in O Consumption 2 PASMCs. Remarkably, induction of SOD2 deficiency is O consumptionwasmeasuredwithaMitocellMT200chamberand 2 sufficient to create a PAH phenotype in normal PASMCs, 782 oxygen meter (Strathkelvin Instruments, North Lanarkshire, whereas correction of SOD2 deficiency has therapeutic ben- Scotland).Cells(106in500(cid:2)L)werestudiedinculturemediumat 37°Cduringa10-minuteprotocol. efit in FHR PASMCs and regresses PAH in vivo. This epigenetic mechanism may have significant mechanistic and Metalloporphyrin Mn(III)tetrakis (4-Benzoic Acid) therapeutic implications in human PAH. Porphyrin Therapy In Vivo Metalloporphyrin Mn(III)tetrakis (4-benzoic acid) porphyrin Methods (MnTBAP)isasynthetic,nontoxic,cell-permeableSODmimetic.A daily 10-mg/kg dose of MnTBAP was selected on the basis of Animal Studies preliminarydataandtheliterature.Similardoses(10mg/kgIPevery The University of Chicago Animal Care Committee approved all 3days)arewelltoleratedandpreventproliferationofpremalignant protocols. FHRs were purchased from Charles Rivers Laboratories cells in a rat model of Barrett esophagus.14 Once FHRs had (Wilmington,Mass)andthenbredinourfacility.FHRswerestudied establishedPAH,asconfirmedbyaPAaccelerationtime(cid:4)25ms, at (cid:2)40 weeks of age. Age-matched FH-BN1 rats and weight- on Doppler echocardiography, they were randomized to receive matchedSprague-Dawleyrats(SDRs)servedascontrols. MnTBAP versus vehicle for 4 weeks. Assessment of functional capacity (a graded treadmill test) and right ventricular mass and ROS in Isolated Resistance PAs and PASMCs function(echocardiography)wasperformedbeforeandaftertherapy. ROS were measured in isolated resistance PAs with L-012 chemi- The severity of PAH at study termination was determined by luminescenceorelectronparamagneticresonance. Doppler echocardiography and high-fidelity catheterization (44 weeksofage). Electron Paramagnetic Resonance Isolated resistance PAs were incubated with a derivative of cyclic Bisulfite Sequencing hydroxylamine(200(cid:2)mol/LinKrebs-HEPESbufferwithdesferri- Genomic DNA was isolated from resistance PAs of FH-BN1 oxamineandDETCat37°C).ChangesinROSproductionduringa consomic rats and FHRs (treated with vehicle or 5-aza-2(cid:1)- Downloaded from circ.ahajournals.org at UNIV OF CHICAGO LIBRARY on June 8, 2010 Archer et al SOD2 Methylation in Pulmonary Hypertension 2663 Figure1.DecreasedSOD2expressioninFHRsandpatientswithWorldHealthOrganizationCategory-1PAH.A,Confocalmicroscopy showsdecreasedPASMCSOD2expressionandincreasedmitochondrialfragmentationinFHRPASMCs.NotethelossofSOD2 (green)inFHRsasevidencedbythereducedintensityandpeakheight.B,Confocalimmunofluorescenceimagesof3controlpatients (whodiedofnon–lung-relatedconditions;top3rows)and3patientswhodiedofPAH(bottomrows).Notethemedialhypertrophyand plexiformlesionsinthePAHpatients.SOD2expression(red)isdecreasedinthemediaandadventitiaofsmallPAsandintheplexi- formlesions.(cid:1)-Smoothmuscle(SM)actin(green)isincreasedinPAH.C,Mean(cid:5)SEMofredfluorescenceintensityshowingdecreased SOD2expressioninthemediaofsmallPAs.*P(cid:4)0.05. deoxycytidine[5-AZA];1mg/kgbodyweightIPinjectionevery3 Detailed methods for cell culture, quantitative polymerase chain daysfor2weeks).GenomicDNAwasdigestedwiththerestriction reaction, catheterization, echocardiography, functional capacity enzyme HindIII and then modified with sodium bisulfite with the (treadmill), PASMC proliferation, and apoptosis assays have been ZymoResearchEZDNAMethylationKit(ZymoResearch,Orange, publishedpreviously7andcanbefoundintheMethodssectioninthe Calif).WedesignedprimersspecifictobisulfitemodifiedDNAin6 online-only Data Supplement. The methodology for quantitative segments of the SOD2 promoter region (cid:2)2 kb upstream of the lunghistologyisalsofoundintheMethodssectionintheonline-only transcriptioninitiationsiteand1segmentwithinintron2(TableIin DataSupplement. theonline-onlyDataSupplement).Polymerasechainreactionprod- Theauthorshadfullaccesstoandtakefullresponsibilityforthe uctswereisolatedandpurifiedbyagarosegelelectrophoresiswitha integrity of the data. All authors have read and agree to the manuscriptaswritten. QIAquickGelIsolationKit(Qiagen,Valencia,Calif)andclonedinto theTOPOTAexpressionvector(Invitrogen,Carlsbad,Calif).After Results transformation of 1-shot, chemically competent Escherichia coli cells,10to15cloneswereselectedforsequencing.Sequenceswere SOD2 Expression Is Reduced in PASMCs of FHRs thenanalyzedformethylationatallCpGlocations. and Patients With PAH Immunostaining revealed a marked reduction in SOD2 ex- Statistics pressionandfragmentationofthemitochondrialreticulumin Sample size for all experiments was (cid:3)10 per group unless stated otherwise.Valuesarestatedasmean(cid:5)SEM.Intergroupdifferences FHR PASMCs (Figure 1A). In lung tissue harvested at between 2 groups were assessed by an unpaired Student t test; an autopsy,SOD2expressionwasreducedwithinthemediaand ANOVA with posthoc analysis using the Fisher protected least adventitia of small PAs and in plexiform lesions (Figure 1B significance test was used for comparison among multiple groups. and1C)ofPAHcomparedwithcontrolpatients(withoutlung Normality was confirmed with a Kolmogorov-Smirnov or disease). D’Agostino and Pearson omnibus test. For data that were not normallydistributed(PAmuscularizationaftercontrolorMnTBAP SOD2 Knockdown Recapitulates a “PAH treatment), we used a Mann-Whitney test. A Fisher exact test was Phenotype” in Normal PASMCs used to compare the number of muscularized vessels between MnTBAPanduntreatedFHRs.AvalueofP(cid:4)0.05wasconsidered To assess whether downregulation of mitochondrial SOD2 statisticallysignificant. wassufficienttocontributetotheinitiationofPAH,weused Downloaded from circ.ahajournals.org at UNIV OF CHICAGO LIBRARY on June 8, 2010 2664 Circulation June 22, 2010 Figure2.InhibitionofSOD2expressionin normalSDRPASMCrecapitulatesthe PAHphenotype.A,siRNAsreduceSOD2 mRNAandH O production.B,siSOD2 2 2 hyperpolarizes(cid:6)(cid:4)m(increasedredTMRM intensity).C,SOD2siRNAactivates HIF-1(cid:1)(notetranslocationtothenucleus; redinmiddle)anddecreasesKv1.5 expression(decreased;greeninleft).D, ImmunoblottingconfirmedthatsiSOD2 decreasesKv1.5expression(left).Inline withlossofKvchannels,siSOD2 increasedintracellularK(cid:7)concentration (middle).siSOD2alsoreducedcaspase activity(right).TMRMindicatestetrameth- ylrhodaminemethyl-esterperchlorate; aFU,arbitraryfluorescentunits. SOD2 siRNA to reduce SOD2 levels in normal SDR gene and examined the effects of demethylation using the PASMCs. SOD2 siRNA decreased SOD2 expression (mes- methyltransferase inhibitor 5-AZA. Genomic DNA isolated senger RNA [mRNA] and protein; Figure 2 and Figure I in from PAs of FHRs, consomic FH-BN1 rats, and 5-AZA– the online-only Data Supplement). Small interfering SOD2 treated FHRs was analyzed. Although there are many CpG also decreased H O production (Figure 2A). SOD2 knock- islands in the SOD2 gene, differential hypermethylation 2 2 down reduced the production of superoxide in normal (relative to consomic FH-BN1 DNA) was found only in an PASMCs,asdemonstratedbyareductioninL-012chemilu- enhancer region in intron 2 (Figure 3A and 3B). To test the minescence. The L-012 signal is specifically inhibited by effectsof5-AZAinvivo,wetreatedFHRsandthenisolated pegylatedSODbutnotpegylatedcatalase,confirmingthatit genomic DNA from PAs for SOD2 gene methylation analy- isameasureofsuperoxide(FigureIIintheonline-onlyData sis. 5-AZA decreased methylation of an intron 2 sequence Supplement). The mitochondrial membrane potential ((cid:6)(cid:4)m) (Figure3Aand3B).WenextculturedPASMCsfromFHRs ofSOD2siRNA-treatedcellsbecamehyperpolarized(Figure andSDRsandtreatedthemwith5-AZA.Again,weidentified 2B).WeinvestigatedtheeffectsofSOD2siRNAon2known adifferentiallymethylatedregionwithinintron2(Figure3C), abnormalities implicated in creating the excess ratio of which was demethylated in response to 5-AZA. There was proliferation to apoptosis in FHR PAH: HIF-1(cid:1)activation tissue heterogeneity in the differentially methylated sites, (translocation to the nucleus) and Kv1.5 downregulation.2 with methylation being present in the SOD2 gene isolated SOD2 siRNA activated HIF-1(cid:1) and downregulated Kv1.5 from FHR PA but not in FHR aortas. An additional site of channel protein expression (Figure 2C and 2D) in SDR differential methylation was found in the FHR SOD2 pro- PASMCs.ThelossoftheKv1.5channelhad2consequences moter (Figure III in the online-only Data Supplement). associated with apoptosis resistance and increased cell pro- 5-AZA increased SOD2 mRNA (Figure 3D) and protein liferation,7,15namelyincreasedcytosolicK(cid:7)(Figure2D)and (Figure 4A and 4B) in FHR PASMCs in a dose-dependent Ca2(cid:7) (Figure I in the online-only Data Supplement). This manner (maximum, 80% SOD2 induction at 10 (cid:2)mol/L). elevation of cytosolic K(cid:7) was associated with decreased 5-AZA also restored Kv1.5 expression (Figure 4C). caspaseactivityinPASMCs(Figure2D).7Therefore,reduc- ing SOD2 expression recapitulated many abnormalities seen SOD2 Hypermethylation Promotes a Proliferative, in FHR PASMCs. Apoptosis-Resistant Phenotype Using flow cytometry, we confirmed that under identical Hypermethylation of the SOD2 Gene in FHRs and conditions FHR PASMCs had roughly double the rate of the Therapeutic Effects of the Methyltransferase proliferationandhalftherateofapoptosisasSDRPASMCs Inhibitor 5-AZA (Figure 4D and 4E). Remarkably, incubating FHR PASMCs Sequencing of the entire SOD2 gene, beginning 600 bp andlungadenocarcinomaA549cellswith5-AZAfor3days upstream from the transcriptional start site in SDRs and significantly decreased proliferation and caused a modest FHRs, demonstrated identical sequences (data not shown). increase in apoptosis (Figure 4D and 4E). O consumption 2 This suggested that decreased SOD2 expression in FHRs increased in FHR PASMCs in response to 5-AZA (Figure might reflect epigenetic silencing of gene transcription, as 4F). These data suggest that methylation-induced SOD2 occurs in cancer.16,17 We validated a bisulfite sequencing downregulation creates a low-O -consumption metabolic 2 assay to measure methylation of key regions of the SOD2 state that favors proliferation and suppresses apoptosis. Downloaded from circ.ahajournals.org at UNIV OF CHICAGO LIBRARY on June 8, 2010 Archer et al SOD2 Methylation in Pulmonary Hypertension 2665 Figure3.MethylationofSOD2inFHRPASMCisreversibleby5-AZA.A,SchematicoftheCGdinucleotidepercentageandCpGislands withintheSOD2promoterandfirst2kbafterthetranscriptionalstartsite.SevenampliconsweresurveyedwithintheSOD2gene.Their approximatelocationsarerepresentedbysolidhorizontallines.ThepositionsofindividualCpGdinucleotidesareshownasverticaltick marksbelowtheampliconmap.NomethylatedCpGpairswereidentifiedinamplicons3to6.*DifferentiallymethylatedCpGdinucleotidesin FHRswithinamplicon7vsBN1tissue.B,CorrespondingmethylationpercentageofthedifferentiallymethylatedCpGinintron2.Resultsare expressedasafrequencyofcytosinemethylationinPAsfromconsomiccontrolBN1rats(n(cid:3)2),FHRs(n(cid:3)3),andFHRstreatedwith5-AZA (FHR-Tx;n(cid:3)3).C,RepresentativesequencingtracesofgenomicDNAfromculturedPASMCs.Onlymethylatedcytidinesareprotected againstbisulfite-mediateddeaminationofcytidineintouridine(whichisrecognizedasthymidinewhenthepolymerasechainreactionproduct isamplified).Asindicatedbythearrow,thecytidineinFHRPASMCswasmethylated(andthereforeremainsacytidine;topleft);thisis reversedby5-AZA.ThesiteisnotmethylatedinFHRaorticSMCsorinSDRPASMCs.Thebargraphshowsthemeandataindicatingthe reversibilityandtissuespecificityofthisSOD2methylationinintron2inculturedPASMCs.D,FHRPASMCshavelowerSOD2mRNAlevels vsconsomicPASMCs.5-AZAcausesadose-dependentincreaseinSOD2expression. FHR PASMCs Produce Less ROS and Are in a Supplement). Thus, there is a reversible, methylation-induced Reduced State depressionofH O productioninFHRs. 2 2 Baseline L-012 chemiluminescence was lower in FHRs com- Increased Expression of DNA Methyltransferases paredwithcontrolPASMCs(Figure5A),andthiswasmirrored in FHRs inareducedredoxstateinthecytoplasmandmitochondria,as BecausegenemethylationisdependentontheactivityofDNA measured with compartment-specific roGFPs (Figure 5B and methyltransferases (MTs), we measured their expression in FigureIVintheonline-onlyDataSupplement).Consistentwith FHRs and control rats. In lung tissue, both the maintenance this, SOD2 siRNA reduced L-012 chemiluminescence produc- DNA MT1 and the de novo DNA MT3B were significantly tion in PASMCs (Figure IIA in the online-only Data Supple- upregulatedcomparedwithcontrol(Figure6A);asimilarpattern ment) and 5-AZA restored ROS production in FHR PAs, as wasfoundinPASMCsfromFHRs(Figure6B). assessedbybothchemiluminescenceandelectronparamagnetic resonance (Figure 5C). Conversely, 5-AZA had no effect on SOD2 Augmentation Restores FHR PASMC H O production in normal PAs. Control experiments with Gene Expression 2 2 pegylatedSODandpegylatedcatalasedemonstratethespecific- Because 5-AZA is a nonspecific demethylating agent and ity of our measurements (Figure IIB in the online-only Data may affect a multitude of genes, we investigated the thera- Downloaded from circ.ahajournals.org at UNIV OF CHICAGO LIBRARY on June 8, 2010 2666 Circulation June 22, 2010 Figure4.5-AZArestoresSOD2expression,reducesproliferation,andenhancesapoptosisinFHRPASMCs.AandB,Representative andmeandatashowingthatFHRPASMCsexpresslessSOD2thanSDRPASMCs;thisispartiallyreversiblewith5-AZAtreatment. n(cid:3)4pergroup.*P(cid:4)0.05.C,5-AZA–induced,dose-dependentincreaseinKv1.5mRNAinFHRPASMCs.*P(cid:4)0.05.DandE,5-AZA (blackbars)increasesapoptosisanddecreasesproliferationinFHRPASMCsandlungcancercells(A549)butnotSDRPASMCs.n(cid:3)4 to6pergroup.*P(cid:4)0.05betweenbaselineand5-AZA.†SignificantdifferencefromSDRPASMCs.F,5-AZAincreasesO consumption 2 inFHRandSDRPASMCsbutnotA549cells(n(cid:3)3to8pergroup). peuticeffectsofdirectSOD2augmentationtoassessitsrole Adenoviral SOD2 significantly increased SOD2 expres- in PAH. We used 2 complementary strategies: direct SOD2 sion in FHR PASMCs (Figure 7A). This inactivated the augmentation with adenoviral gene transfer carrying mito- spontaneously active HIF-1(cid:1) seen in FHRs and increased chondrially targeted SOD2 and administration of a Kv1.5 expression (Figure 7B). Likewise, incubation of FHR membrane-permeable SOD analog, MnTBAP. PASMCs with MnTBAP for 48 hours inactivated nuclear Figure5.LowerROSlevelsandreduced cellularenvironmentinFHRPASMCs.A, DecreasedROSlevelsinfreshlyisolated resistancePAsfromFHRsvsconsomic ratsmeasuredwithL-012chemilumines- cenceat37°C.B,PASMCsweretrans- fectedwithredox-sensitiveGFPconstructs targetedtothecytoplasm(top)andmito- chondria(bottom).FHRPASMCshad reducedcytoplasmandmitochondriarela- tivetoSDRPASMCs.Dithiothreitoland tert-butylhydroperoxidewereusedtocom- pletelyreduceandoxidizethecells,respec- tively.C,ROSmeandataandrepresenta- tivetrace(inset)showingthecyclic hydroxylamine(CMH)tripletsignal.Peak height(electronparamagneticresonance [EPR]amplitudeunits)isproportionalto ROSlevelsandisnormalizedtowet weight.PAsfromFHRstreatedwith5-AZA (blackbars)haveincreasedproductionof ROS(left)andH O (right)vsuntreated 2 2 FHRs.Controlratsshownoinductionof ROSorH O ,n(cid:3)5pergroup. 2 2 Downloaded from circ.ahajournals.org at UNIV OF CHICAGO LIBRARY on June 8, 2010 Archer et al SOD2 Methylation in Pulmonary Hypertension 2667 PAH. This may be relevant for clinical PAH because SOD2 is also downregulated in human PAH (Figure 1). We identi- fiedhypermethylationofaCpGislandinanenhancerregion within intron 2 and the promoter of SOD2 as the basis for SOD2 downregulation in FHRs. This appears to reflect significantly higher expression of DNA MT1 and MT3B in lungs and of DNA MT3B in isolated PASMCs of FHRs (Figure6).ThisepigeneticdownregulationofSOD2impairs H O -mediated redox signaling, activates HIF-1(cid:1), and cre- Figure6.DNAMTexpressionisincreasedinFHRlungand 2 2 PASMCs.A,DNAMT1and3BmRNAareincreasedinFHRvs atesaproliferative,apoptosis-resistantstate(Figures4,5,and SDRlungs(n(cid:3)12each).*P(cid:4)0.05,**P(cid:3)0.01.B,Inlow-passage 7). Both the mechanism of SOD2 downregulation and its (3to4)PASMCs(n(cid:3)8ineachgroup),FHRshadhigherDNA consequences parallel those recently discovered in human MT3BexpressionandatrendtowardincreasedDNAMT1. cancer,16,17 but to the best of our knowledge, this is the first reportofanepigeneticcauseofapulmonaryvasculardisease. HIF-1(cid:1)(Figure 7C and 7D) and restored Kv1.5 expression The epigenetic downregulation of SOD2 was reversible by (Figure 7D). treatment with the DNA MT inhibitor 5-AZA. Furthermore, our study demonstrates that augmentation of SOD2 (by 3 SOD2 Augmentation Regresses PAH In Vivo complementary strategies) restores mitochondrial function, TotestthetherapeuticeffectsofSOD2augmentationinvivo, inhibitsPASMCproliferation,andincreasescellapoptosisin wetreatedFHRswithprovenPAHwithMnTBAP.MnTBAP vitro. In vivo, MnTBAP causes partial regression of estab- waschosenoverSOD2becauseoftheverytransientupregu- lationoftransgeneexpression((cid:2)2weeks)thatisoftenfound lishedPAHanddecreasesthemuscularizationofpulmonary precapillary resistance vessels (Figure 8A and 8D). with adenoviral gene therapy. MnTBAP doubled PA accel- The FHR SOD2 deficiency is the consequence of the erationtime(Figure8A)andcausedaconcomitantreduction covalent cytosine methylation that occurs in dinucleotide inthemeanPApressure(Figure8B)andrightventricularfree wall thickness (Figure 8A). During the 4-week treatment, CpGs (Figure 3). Methylation at the C5 atom of cytosine exercise capacity deteriorated in vehicle-treated FHRs, inhibits gene expression by preventing the binding of tran- whereas the MnTBAP group showed improvement (Figure scriptionfactors.18Methylationisreversibleandheritableand 8C). Quantitative histology performed by blinded readers can be tissue specific.19 Indeed, SOD2 methylation occurred demonstratedthatMnTBAPcausedasignificantreductionin in the FHR PA but not in the FHR aorta (Figure 3), thus the percent medial thickness of precapillary resistance arter- pointingtotissue-specificepigeneticmechanisms.Thisfind- iesandanincreaseinthepercentageofsmall(25to50(cid:2)m) ingmaycontributetoourunderstandingofthelocalizationof nonmuscular PAs (Figure 8D). the pathology in human and FHR PAH to the pulmonary circulation. The SOD2 promoter and several of its introns Discussion haveCpGislandsthatofferpotentialmethylationsites.Using Oneofthemajorfindingsofthisstudyistheidentificationof genomic bisulfite sequencing, we directly confirmed that SOD2methylationasapotentialnew,epigeneticmechanism FHRshave2discretesitesofdifferentialhypermethylation(1 for PAH in an animal model of spontaneous and heritable in intron 2, 1 in the promoter; Figure 3A through 3C and Figure7.SOD2supplementationinacti- vatesHIF-1(cid:1)andincreasesKv1.5expres- sioninFHRPASMCs.A,TheSOD2virus andacontrolGFPvirusareeffective, increasingexpressionofSOD2andGFP mRNA,respectively,inFHRPASMCs.B, ImmunofluorescencewithanAlexa647 secondaryantibodyshowsthattheSOD2 adenovirus(Ad-)increaseshumanSOD2 expression(green;bottomleft).This restoresKv1.5expression(green)andin- activatesHIF-1(cid:1)(rednuclei).Nucleiare counterstainedblue(DAPI).CandD,A 48-hourincubationwithMnTBAP decreasesnuclearlocalizationofHIF-1(cid:1) andrestoresKv1.5expression. Downloaded from circ.ahajournals.org at UNIV OF CHICAGO LIBRARY on June 8, 2010 2668 Circulation June 22, 2010 Figure8.MnTBAPregressesPAHinFHRs.A,MnTBAPreducesmeanPApressuremeasuredbyDoppler(lengthensPAacceleration time[PAAT])anddecreasesrightventricular(RV)thicknessinFHRstreatedfor4weeks(n(cid:3)5pergroup).*P(cid:4)0.05.B,MnTBAPtherapy reducesmeanpulmonaryarterypressure(PAP)andtotalpulmonaryresistance(TPR).C,FHRstreatedwithMnTBAPexerciselongeron agradedtreadmill(n(cid:3)15pergroup).D,LungsectionswerestainedforvonWillebrandfactor(vWF;red),(cid:1)-smoothmusclecell(SMC) actin(green),andDAPI(blue).Notethefullymuscularized(whitearrows),partiallymuscularized(yellowarrows),andnonmuscularized bloodvessels(redarrows).Bottom,ArepresentativefullymuscularizedPAinavehicle-treatedFHR(left)vsMnTBAP(right).Theper- centmedialthicknessofprecapillaryresistancePAswasreducedandthenumberofnonmuscularizedresistancePAswasincreased byMnTBAP.**P(cid:4)0.01vscontrol. Figure III in the online-only Data Supplement). Although Itisinterestingthatchangesintheactivityorexpressionof manyregionsintheSOD2geneareheavilymethylated,these DNAMTscanhavearelativelyspecificoutcomeintermsof 2 were the only CpG islands that were both differentially site-specific methylation and regulation of specific genes in methylatedanddemethylatedby5-AZA.Theintron2siteis certaintissues.Currentmodelssuggestthatthespecificityof inthesameregionoftheSOD2genethathasbeenidentified DNA MT activity can depend on their expression levels or in transformed human lung fibroblast cell lines.20 5-AZA their interaction with other epigenetic regulators. In the covalentlybindsandirreversiblyinhibitsDNAMTs,21result- presentstudy,forexample,wefoundthatFHRanimalswith ing in reactivation of transcription of previously methylated PAHhadhigherexpressionlevelsofDNAMT3B.ThisDNA genesafterarequisitecelldivision.Itisunclearwhy5-AZA MThasbeenshowntohavedistinctCpGmethylationactivity hadnoeffectonotherareasofmethylation,butotherstudies patterns that depend on the tissue environment and on the have described similar observations.17 expressionofdifferentiallysplicedisoforms.24Anotherlevel CpGmethylationisestablishedandmaintainedby3DNA ofDNAmethylationspecificityisachievedbytheinteraction MTs.22 DNA MT1 is expressed in proliferating tissues, and ofDNAMTswithotherepigeneticregulatorssuchashistone its activity is coupled to DNA replication, copying methyl- deacetylases. For example, DNA MT3B contains an ATRX ation patterns from the parental to the daughter strand. homologydomainthatinteractswithhistonedeacetylase1.25 Therefore, it is considered primarily a maintenance MT. In Interestingly, such an association between increased CpG contrast, DNA MT3A and MT3B are considered de novo methylation and decreased histone acetylation has been ob- MTsthatcanestablishnewmethylationpatterns.Weidenti- fied an upregulation of DNA MT3B in FHR PASMCs served for the SOD2 gene.16 (Figure 6), which would be an elegant explanation for the Gene methylation has an established role in promoting observed hypermethylation of the SOD2 gene. Interestingly, pathological cell proliferation in cancer. SOD2, a candidate DNAMT3Bdepletionissufficienttoreactivatemethylation- tumor-suppressor gene,8,9 is silenced in several malignan- silenced genes and to decrease proliferation in both human cies.16,17,26 In multiple myeloma and pancreatic carcinoma, breast adenocarcinoma and A549 cells.23 the epigenetic silencing of SOD2 is caused by hypermethyl- Downloaded from circ.ahajournals.org at UNIV OF CHICAGO LIBRARY on June 8, 2010 Archer et al SOD2 Methylation in Pulmonary Hypertension 2669 ation of CpG islands within the promoter for SOD2.17,26,27 Therapeutic Implications Demethylation of SOD2 in cancer restores SOD2, increases Evidence for the relevance of SOD2 deficiency in PAH H O ,anddecreasescellproliferationandtumorgrowth,16,17,26 comes from the concordant benefit of 3 different strategies 2 2 consistent with our observations (Figures 3D, 4D, and 4E). thatrestoreSOD2expressionorSODactivityinourstudy.In The effects of directly overexpressing SOD2 (by 3 comple- FHRPASMCs,SOD2genetherapy,applicationoftheSOD2 mentary means) are concordant with the effects of SOD2 mimeticMnTBAP,or5-AZAeachledtoHIF-1(cid:1)inactivation demethylation in cancer28 (Figure 7A and 7B). Our study and restoration of Kv1.5 expression (Figure 7). Although demonstratesthatreversinggenemethylationisbeneficialin thesesurrogateendpointsareimportant,thekeytherapeutic FHR PASMCs in vitro. Treatment with 5-AZA decreases finding of our study is that MnTBAP treatment regresses SOD2 methylation and causes a dose-dependent increase in PAHinvivo(Figure8Aand8D).Thishemodynamicbenefit SOD2 and Kv1.5 expression in FHR PASMCs (Figure 4A isassociatedwithareductioninrightventricularhypertrophy through 4C). and improved functional capacity and lung histology. The Production of H O is a critical link between SOD2 concordantfindingsinresponsetocomplementarystrategies 2 2 expression and regulation of proliferation (Figure V in the to modulate SOD2 expression reduce the possibility of online-only Data Supplement provides a schematic repre- artifacts related to flaws in any single strategy such as the sentation of the cascade of the proposed transcriptional, stress of intraperitoneal MnTBAP injections, inflammation metabolic, and redox consequences of SOD2 downregula- fromtheSOD2adenovirus,andpotentialconfoundingeffects tion). Simply knocking down SOD2 expression in a normal of demethylation of nontarget genes by 5-AZA. The benefits of MnTBAP are consistent with those of PASMC diminishes endogenous H O production and leads 2 2 to an associated activation of HIF-1(cid:1)(Figure 2). Moreover, tempol (another membrane permeable SOD mimetic), ananti-SOD2siRNAcausedmanyoftheotherabnormalities whichdecreaseshypoxicpulmonaryhypertensioninrats,31 and recombinant SOD1, which ameliorates persistent pul- seen in human and FHR PAH, including a decrease in monary hypertension in newborn lambs.32 Bowers et al4 expressionofKv1.5channelsandariseincytosoliccalcium have also noted decreased SOD2 in the PAs in human (FigureIBintheonline-onlyDataSupplement).Conversely, PAH; however, their interpretation was that PAH is a augmentingSOD2elevatesproductionofH O inFHRPAs 2 2 condition of increased oxidative stress (in part because (Figure 5C) and reduces cell proliferation (Figure 4E). Sim- other oxidant markers were elevated). Our data indicate ilarly, in prostate cancer, overexpressing SOD2 increases that in FHRs, H O is subphysiological because of both a H O andreducescellproliferation.29Thus,inbothPAHand 2 2 2 2 primary effect, methylation-induced reduction of the cancer,thereisaninversecorrelationbetweenSOD2activity SOD2 gene expression, and a secondary effect, pyruvate and H O -mediated cell proliferation.29 Catalase, which re- 2 2 dehydrogenase kinase–mediated inhibition of oxidative duces H O levels, prevents the ability of SOD2 to inhibit 2 2 metabolism.2Identificationofthetherapeuticpotentialfor cancer cell proliferation.29 These observations suggest that 5-AZAisparticularlyrelevantbecause5-AZA(decitabine) the effect of SOD2 augmentation in PAH and cancer is is approved for human use in myeloproliferative disorders mediated by increasing H O production (from a deficient 2 2 (where it demethylates p15). starting level). We support this contention by showing that 5-AZA increases H O production only in FHR PASMCs, 2 2 Limitations having little effect on normal PASMCs (Figure 5C). There are limitations in using human tissue. One notable Our study also identifies the downstream mechanism by limitation is that we are unsure about smoking status. We whichthismitochondrialabnormalitypromotescellprolifer- acknowledge that smoking could change SOD2 levels33; ation, namely normoxic activation of HIF-1(cid:1). HIF-1(cid:1)acti- however, this is unlikely to be an important confounder vation has previously been identified in human PAH2,6 and because the rodent data are consistent with the human data. FHR PAH.2 The present study supports a key role for H2O2 We acknowledge that the net effect of loss of SOD2 is as the link between SOD2 and cell proliferation, as schema- controversial (oxidation in SOD2 knockout mice34 versus tized in Figure V in the online-only Data Supplement. reduction in our study). Interestingly, the SOD2 haploinsuf- Although ROS are toxic at high levels, there is a physiolog- ficientmousehasadoublingofcancerrisk,34supportingour icallevelofH2O2productionbymitochondriaduringnormal central finding that downregulation of this mitochondrial oxidativemetabolism.12,30PhysiologicallevelsofH2O2serve enzymeisaproliferative,antiapoptoticsignal.Wesuspectthe as redox signaling molecules, involved in oxygen sensing.12 differences in ROS relate to the lifelong duration and more The evidence linking SOD2 levels to ROS in PAH is clear. profound severity of SOD2 loss for the knockout mouse Simply lowering SOD2 message levels (with siRNA) de- compared with acquired and more modest SOD2 loss in creases mitochondrial H O production (Figure 2A); con- FHRs. 2 2 versely,demethylatingtheSOD2geneenhancerinFHRPAs Finally,pyruvatedehydrogenasekinaseactivationinPAH restores SOD2 expression, leading to increased ROS and thwartsmitochondrialrespiration,limitinginputtothemito- mitochondrial H O production (Figure 5C). Compartment- chondrialelectrontransportchain.AlthoughinFHRslowROS 2 2 specific, redox-sensitive GFPs demonstrated that the net andareducedstateactivateHIF-1(cid:1),othersfindthathighROS change in redox state in FHR (versus SDR) PASMCs is levelsstabilizeHIF-1(cid:1).35–37Interestingly,Kaewpilaetal37noted reduction (in both the cytosol and mitochondria), consistent in cancer that siSOD2 activates HIF-1(cid:1), consistent with our withtheobserveddecreasedROSlevelsinFHRs(Figure5). findings.However,theyfoundthatsiSOD2increasedsuper- Downloaded from circ.ahajournals.org at UNIV OF CHICAGO LIBRARY on June 8, 2010
Description: