Antiviral Methods and Protocols Methods in title: Molecular Medicine ; 24 author: Kinchington, Derek. publisher: Humana Press isbn10 | asin: 0896035611 print isbn13: 9780896035614 ebook isbn13: 9780585235684 language: English Antiviral agents--Laboratory manuals, Hepatitis, Viral, Human--drug therapy, subject Antiviral Agents--therapeutic use, DNA Virus Infections--drug therapy, RNA Virus Infections--drug therapy. publication date: 2000 lcc: RM411.A5755 2000eb 616.9/25061 616.9/25061 ddc: Antiviral agents--Laboratory manuals, Hepatitis, Viral, Human--drug therapy, subject: Antiviral Agents--therapeutic use, DNA Virus Infections--drug therapy, RNA Virus Infections--drug therapy. Page i Antiviral Methods and Protocols Page ii METHODS IN MOLECULAR MEDICINE John M. Walker, S E ERIES DITOR 42. Vaccine Adjuvants: Preparation Methods and Research Protocols, edited by Derek T. O'Hagan, 2000 41. Celiac Disease: Methods and Protocols, edited by Michael N. Marsh, 2000 40. Diagnostic and Therapeutic Antibodies, edited by Andrew J. T. George and Catherine E. Urch, 2000 39. Ovarian Cancer: Methods and Protocols, edited by John M. S. Bartlett, 2000 38. Aging Methods and Protocols, edited by Yvonne A. Barnett and Christopher P. Barnett, 2000 37. Electrically Mediated Delivery of Molecules to Cells, edited by Mark J. Jaroszeski, Richard Heller, and Richard Gilbert, 2000 36. Septic Shock Methods and Protocols, edited by Thomas J. Evans, 2000 35. Gene Therapy of Cancer: Methods and Protocols, edited by Wolfgang Walther and Ulrike Stein, 2000 34. Rotavirus Methods and Protocols, edited by James Gray and Ulrich Desselberger, 2000 33. Cytomegalovirus Protocols, edited by John Sinclair, 2000 32. Alzheimer's Disease: Methods and Protocols, edited by Nigel M. Hooper, 1999 31. Hemostasis and Thrombosis Protocols: Methods in Molecular Medicine, edited by David J. Perry and K. John Pasi, 1999 30. Vascular Disease: Molecular Biology and Gene Therapy Protocols, edited by Andrew H. Baker, 1999 29. DNA Vaccines: Methods and Protocols, edited by Douglas B. Lowrie and Robert Whalen, 1999 28. Cytotoxic Drug Resistance Mechanisms, edited by Robert Brown and Uta Böger-Brown, 1999 27. Clinical Applications of Capillary Electrophoresis, edited by Stephen M. Palfrey, 1999 26. Quantitative PCR Protocols, edited by Bernd Kochanowski and Udo Reischl, 1999 25. Drug Targeting, edited by G. E. Francis and Cristina Delgado, 1999 24. Antiviral Methods and Protocols, edited by Derek Kinchington and Raymond F. Schinazi, 2000 23. Peptidomimetics Protocols, edited by Wieslaw M. Kazmierski, 1999 22. Neurodegeneration Methods and Protocols, edited by Jean Harry and Hugh A. Tilson, 1999 21. Adenovirus Methods and Protocols, edited by William S. M. Wold, 1998 20. Sexually Transmitted Diseases: Methods and Protocols, edited by Rosanna Peeling and P. Frederick Sparling, 1999 19. Hepatitis C Protocols, edited by Johnson Yiu-Nam Lau, 1998 18. Tissue Engineering, edited by Jeffrey R. Morgan and Martin L. Yarmush, 1999 17. HIV Protocols, edited by Nelson Michael and Jerome H. Kim, 1999 16. Clinical Applications of PCR, edited by Y. M. Dennis Lo, 1998 15. Molecular Bacteriology: Protocols and Clinical Applications, edited by Neil Woodford and Alan Johnson, 1998 14. Tumor Marker Protocols, edited by Margaret Hanausek and Zbigniew Walaszek, 1998 13. Molecular Diagnosis of Infectious Diseases, edited by Udo Reischl, 1998 12. Diagnostic Virology Protocols, edited by John R. Stephenson and Alan Warnes, 1998 11. Therapeutic Application of Ribozymes, edited by Kevin J. Scanlon, 1998 10. Herpes Simplex Virus Protocols, edited by S. Moira Brown and Alasdair MacLean, 1998 9. Lectin Methods and Protocols, edited by Jonathan M. Rhodes and Jeremy D. Milton, 1998 8. Helicobacter pylori Protocols, edited by Christopher L. Clayton and Harry L. T. Mobley, 1997 7. Gene Therapy Protocols, edited by Paul D. Robbins, 1997 6. Molecular Diagnosis of Cancer, edited by Finbarr Cotter, 1996 5. Molecular Diagnosis of Genetic Diseases, edited by Rob Elles, 1996 Page iii METHODS IN MOLECULAR MEDICINE Antiviral Methods and Protocols Edited by Derek Kinchington St. Bartholomew's and the Royal London School of Medicine and Dentistry, London, UK and Raymond F. Schinazi Emory University, Decatur, GA Humana Press Totowa, New Jersey © 2000 Humana Press Inc. 999 Riverview Drive, Suite 208 Totowa, New Jersey 07512 All rights reserved. No part of this book may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, electronic, mechanical, photocopying, microfilming, recording, or otherwise without written permission from the Publisher. Methods in Molecular Medicine is a trademark of The Humana Press Inc. All authored papers, comments, opinions, conclusions, or recommendations are those of the author(s), and do not necessarily reflect the views of the publisher. This publication is printed on acid-free paper. ANSI Z39.48-1984 (American Standards Institute) Permanence of Paper for Printed Library Materials. Cover illustration: Figure 1 from Chapter 11, "Antiviral Screening Assays for Human Herpesviruses 6 and 7," by Jodi B. Black and Philip E. Pellett. Cover design by Patricia F. Cleary. 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Printed in the United States of America. 10 9 8 7 6 5 4 3 2 1 Library of Congress Cataloging in Publication Data Main entry under title: Methods in molecular medicine. Antiviral methods and protocols/edited by Derek Kinchington and Raymond F. Schinazi. p. cm.(methods in molecular medicine; vol. 24) Includes index. ISBN 0-89603-561-1 (alk. paper) 1. Antiviral agentsLaboratory manuals. I. Kinchington, Derek. II. Schinazi, Raymond F. III. Series: Methods in molecular medicine; 24. [DNLM: 1. Hepatitis, Viral, Humandrug therapy. 2. Antiviral Agentstherapeutic use. 3. DNA Virus Infectionsdrug therapy. 4. RNA Virus Infectionsdrug therapy. WC 536 A633 1999] RM411.A575 2000 616.9'25061dc21 DNLM/DLC for Library of Congress 99-25099 CIP Page v PREFACE This latest addition to the Methods in Molecular Medicine series, Antiviral Methods and Protocols, is opportune because there is an increasing interest in discovering compounds that are effective against both chronic and acute viral infections. A number of the methods described in the volume are unpublished and their inclusion indicates the speed at which this field is moving. This volume is not a review but each chapter contains methods validated by the experts who have spent time in developing the protocols. The hallmark of this series is the comprehensive way in which the methods are described, which includes a list of all the reagents needed for each protocol. Of importance is the section on tips and pitfalls that the authors have discovered while developing their protocols. The manual itself is designed to be used by researchers in universities and industry who are familiar with a range of biological techniques but who want to set up quickly a novel assay system. We encourage a dialog between readers and authors, which may also result in useful collaborations. The first chapter gives an overview of the change in methodologies that have been used for discovering active compounds. Safety considerations have also been reviewed because there are some significant differences in containment requirements between the United States and the United Kingdom, for example. Routine quality testing of cell cultures has also been highlighted because there are many stories of results being invalidated when target cells have been contaminated by microorganisms, which, even at low levels, may significantly alter antiviral endpoints. For each virus group the chapters that describe the assays start with
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