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International Journal o f Molecular Sciences Review Antibacterial and Antifungal Activities of Spices QingLiu1,XiaoMeng1,YaLi1,Cai-NingZhao1,Guo-YiTang1andHua-BinLi1,2,* 1 GuangdongProvincialKeyLaboratoryofFood,NutritionandHealth,DepartmentofNutrition, SchoolofPublicHealth,SunYat-senUniversity,Guangzhou510080,China; [email protected](Q.L.);[email protected](X.M.);[email protected](Y.L.); [email protected](C.-N.Z.);[email protected](G.-Y.T.) 2 SouthChinaSeaBioresourceExploitationandUtilizationCollaborativeInnovationCenter, SunYat-senUniversity,Guangzhou510006,China * Correspondence:[email protected];Tel.:+86-20-8733-2391 Received:16May2017;Accepted:11June2017;Published:16June2017 Abstract: Infectious diseases caused by pathogens and food poisoning caused by spoilage microorganismsarethreateninghumanhealthallovertheworld. Theefficaciesofsomeantimicrobial agents, which are currently used to extend shelf-life and increase the safety of food products in foodindustryandtoinhibitdisease-causingmicroorganismsinmedicine,havebeenweakenedby microbialresistance. Therefore,newantimicrobialagentsthatcouldovercomethisresistanceneed tobediscovered. Manyspices—suchasclove,oregano,thyme,cinnamon,andcumin—possessed significantantibacterialandantifungalactivitiesagainstfoodspoilagebacterialikeBacillussubtilis andPseudomonasfluorescens,pathogenslikeStaphylococcusaureusandVibrioparahaemolyticus,harmful fungilikeAspergillusflavus,evenantibioticresistantmicroorganismssuchasmethicillinresistant Staphylococcus aureus. Therefore, spices have a great potential to be developed as new and safe antimicrobialagents. Thisreviewsummarizesscientificstudiesontheantibacterialandantifungal activitiesofseveralspicesandtheirderivatives. Keywords: spice;antibacterialactivity;antifungaleffect;antimicrobialproperty;essentialoil;clove; oregano;thyme 1. Introduction Microbial pathogens in food may cause spoilage and contribute to foodborne disease incidence, and the emergence of multidrug resistant and disinfectant resistant bacteria—such as Staphylococcusaureus(S.aureus),Escherichiacoli(E.coli),andPseudomonasaeruginosa(P.aeruginosa)—has increasedrapidly,causingtheincreaseofmorbidityandmortality[1]. Weakacidssuchasbenzoic and sorbic acids [2], which are commonly applied in food industry as chemical preservatives to increasethesafetyandstabilityofmanufacturedfoodsonitswholeshelf-lifebycontrollingpathogenic and spoilage food-related microorganisms [3], can result in the development of microbiological resistance [4]. Moreover, chemical preservatives cannot completely eliminate several pathogenic bacteria like Listeria monocytogenes (L. monocytogenes) in food products or delay the growth of spoilagemicroorganisms[5]. Naturalproducts,assubstitutesofsyntheticchemicalpreservatives,are increasinglyacceptedbecausetheyareinnatelybettertoleratedinhumanbodyandhaveinherent superioritiesforfoodindustry[4]. Theantimicrobialactivitiesofnaturalproductsarenecessarytobe studiedandappliedinfoodindustry. Morbidityandmortalityaremainlycausedbyinfectiousdiseasesallovertheworld. TheWorld HealthOrganizationreportedthat55millionpeoplediedworldwidein2011,withone-thirdofthe deathsowingtoinfectiousdiseases[6]. Antibioticresistantmicroorganismscanincreasemortality ratesbecausetheycansurviveandrecoverthroughtheirabilitytoacquireandtransmitresistance Int.J.Mol.Sci.2017,18,1283;doi:10.3390/ijms18061283 www.mdpi.com/journal/ijms Int.J.Mol.Sci.2017,18,1283 2of62 afterexposuretoantibioticdrugs,whichareoneofthetherapiestoinfectiousdiseases[7]. Antibiotic resistant bacteria threaten the antibiotic effectiveness and limit the therapeutic options even for commoninfections[8]. Thedeclineinresearchanddevelopmentofnewantibacterialagents,which areabletoinhibitantibioticresistantdisease-causingmicroorganismssuchasS.aureus,aggravates theemergingantibioticresistance[9]. Therefore,muchattentionshouldbepaidtonaturalproducts, whichcouldbeusedaseffectivedrugstotreathumandiseases,withhighefficacyagainstpathogens andnegligiblesideeffects. Spiceshavebeenusedasfoodandflavoringsinceancienttimes[10],andasmedicineandfood preservativesinrecentdecades[11,12]. Manyspices—suchasclove,oregano,thyme,cinnamon,and cumin—havebeenappliedtotreatinfectiousdiseasesorprotectfoodbecausetheywereexperimentally provedtopossessantimicrobialactivitiesagainstpathogenicandspoilagefungiandbacteria[10,13,14]. Moreover,thesecondarymetabolitesofthesespicesareknownasantimicrobialagents,themajority ofwhicharegenerallyrecognizedassafematerialsforfoodwithinsignificantadverseeffects[11]. Therefore, spices could be candidates to discover and develop new antimicrobial agents against foodborneandhumanpathogens. This review summarizes the scientific studies on the antibacterial and antifungal activities of spicesandtheirderivatives,andsomesuggestionsandprospectsareofferedforfuturestudies. 2. Clove Clove (Eugenia caryohyllata), belonging to family Myrtaceae, is widely used in medicine as antisepticagainstinfectiousdiseaseslikeperiodontaldiseaseduetotheantimicrobialactivitiesagainst oralbacteria[15]. Cloveisalsocommonlyappliedinfoodindustryasanaturaladditiveorantiseptic toincreaseshelf-lifeduetotheeffectiveantimicrobialactivitiesagainstsomefoodbornepathogens[16]. Themainactivecomponentofcloveoilandextractwasfound,i.e.,eugenol[15,17]. 2.1. AntimicrobialActivitiesofClove Antimicrobialactivitiesofclovewaterextractwerestudiedinvitroandinvivoagainstpathogenic microorganisms (S. aureus and E. coli, in a model of pyelonephritis) [18]. An invitro study was conducted with the agar well diffusion method, and the results suggested that clove water extract showed antibacterial activity against S. aureus (minimum inhibitory concentration (MIC): 2 mg/mL) and E. coli (MIC: 2.5 mg/mL). While invivo, the study was conducted in 40 adult male albino rats, and the results confirmed the efficacy of clove extract as natural antimicrobials. The direct antimicrobial activities of ultra-fine powders of ball-milled cinnamon and clove were tested by Kuangetal.[19] against E. coli, S. aureus, Brochothrix thermosphacta (B. thermosphacta), Lactobacillusrhamnosus(L.rhamnosus),andPseudomonasfluorescens(P.fluorescens)frommeat,usingbroth dilutionmethod. Clovepowdershowedstronginhibitoryeffectsonfivemicroorganismstestedwith theMICsrangingfrom1.0%w/v(L.rhamnosusandB.thermosphacta)to2.0%w/v(P.fluorescens),and theinhibitoryeffectswerepositivelyassociatedwiththeconcentrationsofpowder,whichincreased from0.5%to2.5%w/v. Clovecoulddestroycellwallsandmembranesofmicroorganisms,andpermeatethecytoplasmic membranesorenterthecells,theninhibitthenormalsynthesisofDNAandproteins[16]. Eugenol, themajorcomponentofclove,couldinhibittheproductionofamylaseandproteasesinBacilluscereus (B.cereus)andhastheabilityofcellwalldeteriorationandcelllysis[20]. 2.2. ComparisonofAntimicrobialActivitiesofCloveandOtherSpices Badeietal.[21]testedtheantimicrobialactivitiesofcardamom,cinnamonandcloveessential oils(EOs)againstnineGram-positivebacterialstrains,fourGram-negativebacterialstrains,seven molds,andtwoyeasts,comparedwithphenol,usingthediscdiffusionmethod. CloveEOshowed the highest antimicrobial activity, and the antimicrobial spectra (diameter of inhibition zones) of 10% clove EO was 1.48 times as that of 10% phenol. Schmidt et al. [22] evaluated the antifungal Int.J.Mol.Sci.2017,18,1283 3of62 effects of eugenol-containing EOs of 4 spices on 38 Candida albicans (C. albicans) isolates, of which 12 were isolated from oropharynges, 16 from vaginas, and 10 from damaged skin, using the microdilutionmethod. CloveEOpossessedthestrongestantifungalactivitiesagainstallC.albicans strainsamongthetestedspices. Pureeugenolaloneexhibitedweakerantifungalactivitiesthanclove leaf EO. Angiendaetal.[23] investigated the antimicrobial activities of EOs of four spices against Salmonella typhimurium (S. typhimurium), E. coli, B. cereus, and Listeria innocua (L. innocua) by agar diffusiontest. CloveEOshowedthemosteffectiveinhibitionagainstbothGram-positivebacteria andGram-negativebacteriacomparedwiththreeotherEOs,withtheMICsrangingfrom1.25%v/v (B. cereus) to 2.50% v/v (S. typhimurium and E. coli). Lomarat et al. [17] reported the antimicrobial activitiesofEOsfromninespicesagainsthistamine-producingbacteriaincludingMorganellamorganii (M.morganii),bydeterminingMICsandminimumbactericidalconcentrations(MBCs)usingthebroth dilutionassay,andalsofoundtheantibacterialcompoundsofEOsbybioautography-guidedisolation. TheresultsindicatedthatthecloveEOwasthemosteffectiveagainstM.morganiiamongninetested spiceswithMIC0.13%v/vandMBC0.25%v/v. Theeugenolwasidentifiedastheactivecomponent ofcloveEObythinlayerchromatographybioautographyassay. Shanetal.[24]testedtheantibacterialactivitiesofethanolextractsfromfivespicesandherbs against L. monocytogenes, S. aureus, and Salmonella enterica (S. enterica) in raw pork by counting bacterial enumeration. When treated with clove extract, raw pork samples were found with the fewestcoloniesoftestedbacteria. Bayoubetal.[25]reportedtheantimicrobialactivitiesofethanol extracts of 13 plants including clove against L. monocytogenes, the MICs were determined by agar well diffusion test. The results showed that clove extract was the most effective inhibitor against L.monocytogenescomparedwiththeother12selectedplantethanolextracts,withtheMIC0.24mg/mL. Cuietal.[26]testedtheantimicrobialactivitiesof90plantextracts(waterand99.5%ethanolextracts) againstClostridiumspp. Clovewaterextractwasfoundwiththegreatestantimicrobialactivityagainst Clostridium botulinum in trypticase peptone glucose yeast extract broth (pH = 7.0) among all the water extracts, and the MICs of clove extract ranged from 0.1% to 0.2% against Clostridium spp. Antimicrobialeffectsof3extracts(ethylacetate,acetone,andmethanolextracts)of12plantswere testedon2fungi(Kluyveromycesmarxianus(K.marxianus)andRhodotorularubra(R.rubra))and8bacteria (Klebsiellapneumoniae(K.pneumoniae),Bacillusmegaterium(B.megaterium),P.aeruginosa,S.aureus,E.coli, Enterobactercloacae(E.cloacae),Corynebacteriumxerosis(C.xerosis),andStreptococcusfaecalis(S.faecalis)) bythediscdiffusionmethod[27]. Cloveexhibitedthemosteffectiveinhibitoryimpacts. Themethanol extractfromcloveshowedinhibitionagainstmicroorganisms(diameterofinhibitionzones(DIZs): 8–24mm)testedexceptK.pneumoniae. Theacetoneextractshowedinhibitionagainstmicroorganisms (DIZs: 8–18 mm) tested except R. rubra and K. pneumoniae. The ethyl acetate extract only showed antibacterialactivityagainstB.megaterium(DIZ:7mm). Liangetal.[28]observedtheantimicrobial activitiesofsevenspices,anddifferentconcentrationsofextractsandEOsineachspicewereusedto testtheeffectsonthegrowthofspoilagemicroorganismsinappleciderbytotalplatecounts. Clove productsshowedthestrongestantimicrobialactivitiescomparedwithotherspicestested.Nearlyseven logreductionofmicroorganismswasobservedat0.8%v/vintheciderforcloveoiland2%w/wfor clovepowderatroomtemperature. Badheetal.[29]testedtheantimicrobialactivitiesofmanyspice andherbpowdersagainstS.aureus,S.typhimurium,E.coli,andB.cereusatrefrigeratedtemperature (8±2◦C)forintervalsof0,3,6,12,24,and48h. Theresultsindicatedthatattheconcentrationof2%, clovepowdershowedhighesteffectonS.aureusfollowedbyE.coliandS.typhimurium,andat24h underrefrigeration,clovepowderledtoasignificantreductionofbacteriacounting. 2.3. TheApplicationofCloveasAntimicrobialAgentsinFoodPackaging CloveEOanditsfunctionalextractshavebeenincorporatedintofilms,theantimicrobialactivities ofwhichhavebeenevaluatedinsomestudies.Inastudy,chitosanathigh,moderateandlowmolecular masswereelaboratedwithantimicrobialfilmswhichwereincorporatedwithEOsandextractsfrom twospices[30]. ThentheantimicrobialeffectsofthefilmswereinvestigatedonE.coli,S.typhimurium, Int.J.Mol.Sci.2017,18,1283 4of62 S.aureus,B.cereus,andL.monocytogenes. Thefilmspreparedbylowmolecularmasschitosanwith 2%EOandethylheptanoateextractfromcloveshowedantimicrobialactivitiesagainstamajority ofthetestedstrains. Inanotherstudy,theresearcherstestedtheantimicrobialactivitiesofEOsand functionalextractsofcumin,clove,andelecampaneagainstE.coli,S.typhimurium,B.cereus,S.aureus, andL.monocytogenesbydeterminingtheMICsandMBCs[31]. Theyalsoevaluatedtheantibacterial activitiesofediblefilmspreparedbyEOsandfunctionalextractsofspicesbasedonchitosanpolymeric structureagainstthesamebacteriabydeterminingtheDIZs. CloveEOshowedthebestinhibitory effectswiththeMICof500mg/Lonallthebacteriatested,cloveextractsshowedverysimilarMICs to those of EO, except ethyl caproate extract of clove against L. monocytogenes (MIC of 750 mg/L) andethylheptanoateextractofcloveagainstB.cereus(MICof250mg/L).Amongthechitosanfilms addedwithEOs,onlycloveshowedinhibitionzonesofalltestedbacteriaexceptL.monocytogenes. The ethylheptanoateextractofclovefilmalsopossessedantibacterialactivitiesagainstalltestedbacteria, weakerthanthoseofcloveEOthough. Liuetal.[32]evaluatedtheantimicrobialactivitiesofspice EOsagainstmicrobialpopulationsinchilledporkstoredinPEfilmantimicrobialpackageusingthe diskdiffusionmethodtodeterminetheDIZsandserialdilutionassaytodeterminetheMICs. Clove EOwasthemosteffectiveagainstmicroorganismstestedamongallthespiceEOstested. TheMICsof cloveEOwere0.10%,0.10%,and0.30%v/vagainstEnterobacteriaceae,S.aureus,andPseudomonassp., respectively. SpiceEOspossessedtheabilitytodecreasethenumberofspoilagepopulations,butnot thespeciesdiversityofspoilagemicrobiota. Collectively, clove EO and extracts could prevent against some food spoilage and foodborne pathogens(Table1),especiallyGram-positivebacteria. TheMICsofclovewerelessthan2.5%against testedmicroorganismslikeP.fluorescens,S.typhimurium,E.coli,B.cereus,andL.innocua. Generally speaking,thequalitiesofthepaperscitedaregoodandtheresultsarereliable. Int.J.Mol.Sci.2017,18,1283 5of62 Table1.Antibacterialandantifungalactivitiesofclove. TypeofSamples BacteriaandFungi MainResults Reference Bothinvivoandinvitroresultsconfirmedtheefficacyofclove Cloveandcinnamonwaterextracts StaphylococcusaureusandEscherichiacoli [18] extractasnaturalantimicrobials. Clovepowdershowedastronginhibitoryeffectwiththe E.coli,S.aureus,Brochothrixthermosphacta, Ultra-finepowdersofball-milledclove minimuminhibitoryconcentrations(MICs)rangingfrom1.0%to [19] Lactobacillusrhamnosus,Pseudomonasfluorescens 2.0%w/v. Cardamom,cinnamon,cloveessential 13bacterialstrains,7moldsand2yeasts CloveEOpossessedthehighestantimicrobialactivities. [21] oils(EOs)andphenol CloveEOpossessedthestrongestactivitiesagainstallC.albicans 4spiceEOs Candidaalbicans [22] strains. Salmonellatyphimurium,E.coli,Bacilluscereus, CloveEOshowedthemosteffectiveinhibitionwiththeMICs 4spiceEOs [23] Listeriainnocua rangingfrom1.25%to2.50%v/v. 9spiceEOs Morganellamorganii CloveEOwasthemosteffectivewithMICof0.13%v/v. [17] Ethanolextractsfrom5spicesandherbs Listeriamonocytogenes,S.aureus,Salmonellaenterica Cloveextractwasthemosteffectiveagainstbacteriatested. [24] CloveextractwasthemosteffectivewiththeMICof0.24 13plantethanolextracts L.monocytogenes [25] mg/mL. Clovewaterextractwasthemosteffectiveamongallthewater 90plantextracts Clostridiumspp. [26] extractswiththeMICrangingfrom0.1%to0.2%. Kluyveromycesmarxianus,Rhodotorularubra,Klebsiella Ethylacetate,acetoneandmethanol pneumoniae,Bacillusmegaterium,Pseudomonasaeruginosa, Clovepossessedthemosteffectiveinhibitoryeffects. [27] extractsof12plantspecies S.aureus,E.coli,Enterobactercloacae, Corynebacteriumxerosis,Streptococcusfaecalis Cloveproductshadthestrongestantimicrobialactivities 7spices,theirextractsandEOs Microorganismsinapplecider [28] comparedwithotherspicestested. 2%levelofclovepowderwasmoreeffectiveagainstS.aureus Manyspiceandherbpowders S.aureus,S.typhimurium,E.coli,B.cereus [29] followedbyE.coliandS.typhimuriumunderrefrigeration. Thefilmsoflowmolecularweightchitosanwithaconcentration EOsandfunctionalextractsofcumin E.coli,S.typhimurium,S.aureus,B.cereus, of2%ofEOofcloveandcloveethylheptanoateextracthad [30] andclove. L.monocytogenes antimicrobialactivitiesagainstmoststrainstested. EOsandfunctionalextractsofcumin, E.coli,S.typhimurium,B.cereus,S.aureus, ChitosanfilmsaddedwithcloveEOshowedthebestinhibitory [31] clove,andelecampane L.monocytogenes effectswiththeMICsof500mg/L. Enterobacteriaceae,S.aureus,Pseudomonassp.,Lacticacid 3spiceEOs CloveEOwasthemosteffectiveagainstmicroorganismstested. [32] bacteria,Brocithrixthermosphacta Int.J.Mol.Sci.2017,18,1283 6of62 3. Oregano Oregano(Origanumvulgare),belongingtofamilyLamiaceae,hasbeenusedasfoodseasoningand flavoringforalongtime. Themajorcomponentsassociatedwithantimicrobialactivitiesinoregano EOwereprovedtobecarvacrolandthymol[33]. 3.1. AntimicrobialActivitiesofOregano Babacan et al. [34] evaluated the antimicrobial activities of oregano extract against various Salmonella serotypes by evaluating the bacterial growth with disc diffusion method. The results showed that DIZs of oregano were 15, 19, and 16 mm for Salmonella gallinarum (S. gallinarum), Salmonellaenteritidis(S.enteritidis),andS.typhimurium,respectively. Santoyoetal.[35]observedthe antimicrobialactivitiesofEO-richfractionsoforeganowhichwereselectivelyprecipitatedinthesecond separatorindifferentconditionsagainstsixmicroorganismstrains(S.aureus,Bacillussubtilis(B.subtilis), E.coli,P.aeruginosa,C.albicans,andAspergillusniger(A.niger)),usingthediskdiffusionandbroth dilutionmethods. Theresultsshowedthatallofthesupercriticalfluidextractionfractionsexhibited antimicrobialeffectsontestedmicroorganisms,andthemostefficientfractionwasobtainedwith7% ethanolat150barand40◦C.DeSouzaetal.[36]evaluatedtheeffectsofheating(atthetemperatures of60,80,100,and120◦C,atadurationof1hforeach)ontheantimicrobialactivitiesoforeganoEO against9microorganismstrains(C.albicans,Candidakrusei(C.krusei),Candidatropicalis(C.tropicalis), B. cereus, E. coli, S. aureus, Yersinia enterocolitica (Y. enterocolitica), S. enterica, and Serratia marcescens (S. marcescens)), using the solid medium diffusion procedure. The results indicated that heating treatmentshowednosignificanteffectsontheantimicrobialactivitiesofEO,withtheDIZsandMICs ofheatedEOclosetothoseofEOkeptatroomtemperature(MICsrangingfrom10to40µL/mL). OreganocouldbindtosterolsinthefungalmembranesofC.albicansstrains[37],buttheexact mechanismsofactiononothermicroorganismsaretobefurtherstudied. Carvacrol,oneofthemajor componentsoforegano,couldinteractwithcellmembranesthroughchangingthepermeabilityfor smallcations[38]. AsthechemicalcompoundsinEOandextractsoforeganoarecomplex,theycould inhibitmicroorganismsthroughdifferentcelltargets. 3.2. ComparisonofAntimicrobialActivitiesofOreganoandOtherSpices Ozcanetal.[39]investigatedtheantifungalactivitiesoffourspicedecoctionsagainstsixmolds (Fusarium oxysporum f. sp. phaseoli, Macrophomina phaseoli (M. phaseoli), Botrytis cinerea (B. cinerea), Rhizoctoniasolani(R.solani),Alternariasolani(A.solani),andAlternariaparasiticus(A.parasiticus)). The resultsshowedthatthemycelialgrowthwere100%inhibitedby10%oreganodecoctioninculture medium.Ai-Turkietal.[40]testedtheantimicrobialactivitiesofaqueousextractsoffourplantsagainst E.coliandB.subtilisusingthediscdiffusionmethod. Oreganoextractshowedthebestantibacterial effectsontwobacteriacomparedwiththreeotherspiceextracts,andB.subtilisshowedmoresensitivity thanE.coli.Marquesetal.[41]assessedtheantimicrobialactivitiesoftheEOsoforeganoandmarjoram againstS.aureusisolatedfrompoultrymeatusingthediskdiffusionmethod,andtheMICsandMBCs weretestedusingthemicrodilutiontechnique. AlltheS.aureusstrainsweresusceptibletooreganoEO withtheMICsrangingfrom6.25to25µL/mL,butfouroftheisolateswereresistanttoampicillinand onewasresistanttotetracycline. Bozinetal.[42]investigatedtheantimicrobialactivitiesof3spiceEOs against13bacterialstrainsusingthehole-plateagardiffusionmethodand6fungibythemicrodilution technique. The results indicated that the most effective antibacterial activities were expressed by oreganoEO,evenonmultiresistantstrainsofP.aeruginosaandE.coli. Viuda-Martosetal.[43]studied theantimicrobialactivitiesofEOsfromsixspicesagainstsixbacteria(Lactobacilluscurvatus(L.curvatus), Lactobacillus sakei (L. sakei), Staphylococcus carnosus (S. carnosus), Staphylococcus xylosus (S. xylosus), Enterobactergergoviae(E.gergoviae)andEnterobacteramnigenus(E.amnigenus)),usingthediscdiffusion method. OreganoEOwasthemosteffectiveagainstbacteriatested,withDIZsrangingfrom35.29mm (S. xylosus) to 57.90 mm (E. amnigenus). Santurio et al. [44] reported the antimicrobial activities of Int.J.Mol.Sci.2017,18,1283 7of62 EOsofeightspicesagainstE.colistrainsisolatedfrompoultryandcattlefaecesbydeterminingthe MICsusingthebrothmicrodilutiontechnique. Theresultsshowedthatthemosteffectiveagainstall E.colistrainsinthestudywasoreganoEO.Khosravietal.[45]investigatedtheantifungalactivities ofArtemisiasieberiandoreganoEOsagainstCandidaglabrata(C.glabrata)isolatedfrompatientswith vulvovaginalcandidiasisbydeterminingtheMICsandminimalfungicidalconcentrations(MFCs), usingthebrothmacrodilutionmethod.TheresultsindicatedthattheEOsinhibitedalltestedC.glabrata isolates concentration-dependently, with the MICs ranging from 0.5 to 1100 µg/mL (mean: 340.2 µg/mL) for oregano. Dal Pozzo et al. [46] studied the antimicrobial activities of 7 spice EOs, and somemajorityconstituentsofthesespicessuchascarvacrol,thymol,cinnamaldehyde,andcineole against33Staphylococcusspp. isolatesfromherdsofdairygoats,bydeterminingtheMICsandMBCs usingthebrothmicrodilutionmethod. Oreganoandthymepossessedequallystrongantimicrobial activitiesamongEOs. Santosetal.[47]evaluatedtheantimicrobialactivitiesoffourspicesagainst severalbacterialikeS.aureusandE.coliisolatedfromvongoleandbacteriastandardATCC(American TypeCultureCollection): E.coli,S.aureus,andSalmonellacholeraesuis(S.choleraesuis),bydetermining theMICsusingdiffusiontest. OreganoandcloveEOspresentedantimicrobialactivitiesagainstall tested bacteria, but oregano presented larger DIZs of 26.7 mm (E. coli) and 29.3 mm (S. aureus). Hyun et al. [48] tested the antibacterial effects of various spice EOs including oregano on total mesophilic microorganisms in products (fresh leaf lettuce and radish sprouts) using the dipping method. Onespeciesoforegano(intheUSA)EOshowedthebesteffectsonmaintainingreduced levels of total mesophilic microorganisms in fresh leaf lettuce and radish sprouts compared with thecontrol. 3.3. TheApplicationofOreganoasAntimicrobialAgentsinFoodPackaging TheantimicrobialeffectsofpureEOsoffourspicesandchitosan-EOsfilmsonL.monocytogenes andE.coliwereevaluatedinvitrobyagardiffusiontest[49]. TheantimicrobialactivitiesofEOsalone andincorporatedinthefilmsweresimilarfollowingtheorder: oregano>>coriander>basil>anise. Whenusedininoculatedbolognasamplesat10◦Candstoredforfivedays,purechitosanfilmsled to2logreductionofL.monocytogenes,3.6–4logreductionofL.monocytogenes,and3logreductionof E.coliwereobservedinfilmsincorporatedwith1%and2%oreganoEO. Alltheabovestudiesareofgoodquality, andoreganoshowedstrongantimicrobialactivities againstmicroorganismstrainssuchasStaphylococcusspp. andS.aureusisolateswithlargerDIZsand lowerMICs,MBCs,andMFCscomparedwithseveralotherspices(Table2). Futurestudiescould focusontheapplicationoforeganoanditsEOinfoodindustry,andalsothepossiblemodeofaction. Int.J.Mol.Sci.2017,18,1283 8of62 Table2.Antibacterialandantifungalactivitiesoforegano. TypeofStudy BacteriaandFungi MainResults Reference Salmonellagallinarum,Salmonellaenteritidis, Oreganoextract OreganoextracthadantibacterialeffectsonSalmonellaserotypes. [34] S.typhimurium S.aureus,B.subtilis,E.coli,P.aeruginosa,C.albicans, Allofthesupercriticalfluidextractionfractionsshowed EO-richfractionsoforegano [35] Aspergillusniger antimicrobialactivitiesagainstalltestedmicroorganisms. C.albicans,Candidakrusei,Candidatropicalis,B.cereus, Heatingtreatmentshowednosignificanteffectsonthe OreganoEO E.coli,S.aureus,Yersiniaenterocolitica,S.enterica, [36] antimicrobialactivitiesofEO. Serratiamarcescens F.oxysporumf.sp.phaseoli,Macrophominaphaseoli, The10%leveloforeganodecoctionwas100%inhibitiveto 4spicedecoctions Botrytiscinerea,Rhizoctoniasolani,Alternariasolani, [39] mycelialgrowthintheculturemedium. Alternariaparasiticus Oreganoextracthadthehighestantibacterialactivitiesagainstall 4plantaqueousextracts E.coliandB.subtilis [40] testedbacteria. OreganoandmarjoramEOs S.aureusisolatedfrompoultrymeat. AlltheisolatestestedweresensitivetoEOoforegano. [41] 3spiceEOs 13bacterialstrainsand6fungi OreganoEOshowedthemosteffectiveantibacterialactivities. [42] Staphylococcusxylosus,Staphylococcuscarnosus, 6spiceEOs Lactobacillussakei,Lactobacilluscurvatus,Enterobacter OreganoEOwasthemosteffective. [43] gergoviae,Enterobacteramnigenus 8spiceEOs E.colistrainsisolatedfrompoultryandcattlefaeces. OreganoEOwasthemosteffectiveagainstE.coli. [44] Candidaglabrataisolatedfrompatientswith TheMICsoforeganoEOrangedfrom0.5to1100µg/mLforall OreganoandA.sieberiEOs [45] vulvovaginalcandidiasis. testedC.glabrataisolates. OreganoandthymeEOspossessedtheequalandstrongest 7spiceEOsandthemajorityconstituents 33Staphylococcusspp.isolates [46] antimicrobialactivitiesamongEOs. S.aureusandE.coliisolatedfromvongoleandbacteria Oreganopresentedantimicrobialactivitiesagainstalltested 4spiceEOs [47] standardATCC:E.coli,S.aureus,Salmonellacholeraesuis bacteria. Oregano-2(intheUSA)oilwasthemosteffectiveatmaintaining VariousspiceEOs Microorganismsinfreshleaflettuceandradishsprouts. [48] thereducedlevelsoftotalmesophilicmicroorganisms. PureEOsof4spicesandchitosan-EOs BothoreganoEOaloneandincorporatedinthefilmspossessed L.monocytogenesandE.coli [49] films thebestantimicrobialactivities. Int.J.Mol.Sci.2017,18,1283 9of62 4. Thyme Thyme(Thymusvulgaris), belongingtofamilyLamiaceae, isasubshrubnativetothewestern Mediterraneanregion. Thymeiswidelyusedasaspicetoaddspecialflavortofoods. Inrecentstudies, thymewasfoundtopossessefficientantimicrobialactivitiesandwasusedinsomefoodstoextendthe shelf-life[50]. 4.1. AntimicrobialActivitiesofThyme A study evaluated the antimicrobial activities of thyme EO against bacteria (B. subtilis, S.aureus,Staphylococcusepidermidis(S.epidermidis),P.aeruginosa,E.coli,andMycobacteriumsmegmatis (M.smegmatis))andfungalstrains(C.albicansandCandidavaginalis)[51]. ThymeEOshowedeffective bactericidalandantifungalactivitiesagainsttestedmicroorganismstrainswithMICsrangingfrom75 to1100µg/mLforbacteria,andfrom80to97µg/mLforfungi. Inanotherstudy,EOsobtainedfrom thymeharvestedatfourontogeneticstagesweretestedfortheirantibacterialactivitiesagainstnine strainsofGram-negativebacteriaandsixstrainsofGram-positivebacteriausingthebioimpedance methodtotestthebacteriostaticactivitiesandplatecountingtechniquetostudytheinhibitoryeffects by direct contact [52]. The results indicated that all the thyme EOs had significant bacteriostatic activitiesagainstthemicroorganismstested. Furthermore,theantimicrobialactivitiesofEOsoffour Thymusspecies(T.vulgaris, T.serpyllum, T.pulegioides,andT.glabrescens)weredeterminedbyagar diffusionmethod[53].T.vulgarisandT.serpyllumEOswerethemostefficientastheyinhibitedallthe testedbacteria(P.aeruginosa,Cronobactersakazakii(C.sakazakii),L.innocua,andStreptococcuspyogenes (S.pyogenes))andyeasts(C.albicansandSaccharomycescerevisiae(S.cerevisiae))bothatoriginaland half-dilutedconcentrations.P.aeruginosa,L.innocua,andS.pyogeneswerehighlyandequallysensitive totheThymusoils,whileC.sakazakiiexhibitedlimitedsensitivity,andthesensitivityofthetwoyeast strainsweresimilartothatofC.sakazakii,butS.cerevisiaewasalittlemoresensitivethanC.albicans. Themajoractivecompoundofthymeisthymol,whichexerteditsantimicrobialactionthrough bindingtomembraneproteinsbyhydrophobicbondingandhydrogenbonding,andthenchanging thepermeabilityofthemembranes[20]. Thymolalsodecreasedintracellularadenosinetriphosphate (ATP)contentofE.coliandincreasedextracellularATP,whichcoulddisruptthefunctionofplasma membranes[54]. AsthymolwasprovedtoactdifferentlyagainstGram-positiveandGram-negative bacteria[20],theexactmechanismsofantimicrobialactionshouldbefurtherstudied. 4.2. ComparisonofAntimicrobialActivitiesofThymeandOtherSpices Al-Turkietal.[55]reportedtheantibacterialactivitiesofthyme,peppermint,sage,blackpepper andgarlichydrosolsagainstB.subtilisandS.enteritidis,usingtheagardiskdiffusionmethod. Thyme hydrosoldemonstratedmoresignificantinhibitoryeffectsonB.subtilisandS.enteritidisthansage, peppermint, and black pepper hydrosols, with the mean DIZs 20 mm for B. subtilis and 15 mm forS.enteritidis. Accordingtoanotherstudy,theantimicrobialeffectsofthesixplanthydrosolson S.aureus,E.coli,S.typhimurium,P.aerugenosa,andC.albicansweretestedbydeterminingthemicrobial growthzonesonhydrosolagarplatesandcontrolagarplates[56]. Theresultsshowedthatat15% thymehydrosolcompletelyinhibitedE.coliandS.typhimurium,butC.albicanswasinactivetothe tested hydrosols. Girova et al. [57] assessed the antimicrobial activities of five plant EOs against psychrotrophicmicroorganisms(P.fluorescens,Pseudomonasputida(P.putida),P.fragi,B.thermosphacta, andC.albicans)isolatedfromspoiledchilledmeatproductsandsomereferencestrains(P.fluorescens ATCC17397,P.putidaNBIMCC(NationalBankforIndustrialMicroorganismsandCellCultures)561, P.aeruginosaATCC9027,andC.albicansATCC10231)usingthemethodofdiscdiffusionandserial brothdilution. TheresultsindicatedthattheantimicrobialeffectsoftheEOswereequalat37◦Cand 4◦C.ThymeEOexhibitedthehighestantimicrobialactivitieswiththeMICsrangingfrom0.05%to 0.8%w/v. Hajlaouietal.[58]observedtheanti-Vibrioalginolyticus(V.alginolyticus)activitiesoffive aromaticplantEOsusingagarwelldiffusiontest,andtheMICsandMBCswereexaminedusingthe brothmicrodilutionsusceptibilitymethod. ThymeEOwasprovedtobethemostefficientagainst13 Int.J.Mol.Sci.2017,18,1283 10of62 V.alginolyticusstrainscomparedwith4otherEOs,withtheMICsrangesof0.078–0.31mg/mLand MBCsrangesof0.31–1.25mg/mL.Also,Viuda-Martosetal.[59]assessedthegrowthinhibitionofsome indicatorsofspoilagebacteriastrains(L.innocua,S.marcescens,andP.fluorescens)andtheconcentration effectsoffivespiceEOsusingtheagardiscdiffusionmethod. OnlytheEOofthymeshowedinhibitive effectsonalltestedbacteriaatalladdeddoses(100%,50%,25%,12.5%,and5%). Aliakbarluetal.[60] evaluatedtheantibacterialactivitiesofEOsfromthyme,Thymuskotschyanus,Ziziphoratenuior,and Ziziphoraclinopodioides,againsttwoGram-positivebacteria(B.cereusandL.monocytogenes)andtwo Gram-negative bacteria (S. typhimurium and E. coli), using the agar disc diffusion and micro-well dilutionassay. TheEOofthymeshowedthehighestantibacterialactivities,withthewidestinhibition zonesandthelowestMICs(0.312–1.25µL/mL),andB.cereuswasthemostsensitivebacteriumtested. Hyunetal.[48]investigatedtheantibacterialeffectsofseveralEOson18pathogenicbacteriaand15 spoilagebacteriabyagardiscdiffusiontest. Theresultsshowedthatthyme-1(T.vulgaris)EOand thyme-2(T.vulgarisctlinalool)EOexertedthehighestantibacterialactivitiesagainst18pathogenic bacteriastrainscomparedwithotherspices,exceptforP.aeruginosa. Thyme-1EOalsodemonstrated thebestantibacterialeffectsonspoilagebacteria. Inaddition,theantimicrobialeffectsof17spices andherbsagainstShigellastrainsweretestedinanotherstudy[61]. TheMICsweredeterminedby theagardilutionmethodwithdriedgroundspicesandherbsaddedtothebrothandagar,andthe results showed that MICs of thyme were 0.5–1% w/v for the Shigella strains. The study also used various combinations of temperatures (12, 22, and 37 ◦C), pH values (5.0, 5.5, and 6.0), and NaCl concentrations(1%,2%,3%,and4%w/v),andtheinclusionorexclusionofthymeorbasilat1%w/vin aMueller–Hintonagarmodelsystemtotesttheinhibitoryeffectsofthymeandbasil. Inthepresenceof thyme,Shigellaflexneri(S.flexneri)didnotdevelopColony-FormingUnits(CFU)duringtheseven-day incubationperiodfor16ofthe18testedcombinations. Somestudiescomparedtheantimicrobialactivitiesofdifferentextractsofthyme.Martinsetal.[62] evaluatedandcomparedtheantimicrobialactivitiesoftheinfusion,decoction,andhydroalcoholic extracts prepared from thyme against S. aureus, S. epidermidis, E. coli, Klebsiella spp., P. aeruginosa, Enterobacteraerogenes(E.aerogenes),Proteusvulgaris(P.vulgaris),andEnterobactersakazakii(E.sakazakii) usingthediscdiffusionhalotest. ForGram-positivespecies,thymeextractsonlypresentedactivity againstS.epidermidis,andhydroalcoholicextractshowedalowerantibacterialactivitythandecoction andinfusionextracts,whichshowedthesimilaractivities. ForGram-negativespecies,thymeextracts showed antimicrobial activities in the order of E. coli > P. vulgaris, P. aeruginosa > E. aerogenes = E. sakazakii; decoction and hydroalcoholic extracts had similar effects against the bacteria except P.aeruginosa,whilethelowestactivitywasobservedininfusionextracts. Moreover,theantifungal effectsofthymeEO,hydrosolandpropolisextractsonnaturalmycobiotaonthesurfaceofsucukwere evaluated[63]. Theresultsshowedthatpotassiumsorbate(15%w/v,inwater),thymeEO(10mg/mL, indimethylsulfoxide),andpropolisextract(50mg/mL,indimethylsulfoxide)reducedby4.88,2.45, and2.05logCFU/ginyeast-moldcountingcomparedwithsterilewater,respectively. Aman et al. [64] analyzed the polyphenolic fractions and oil fractions of oilseeds from 4 spices, including thyme, for their antimicrobial activities against 35 bacterial strains. The results showed that oil fractions of all spice oilseeds were more active than their polyphenolic fractions,andthymeoilfractionhadthehighestantibacterialactivitiescomparedwithotherspice oilseeds. Aznar et al. [65] studied the growth of Candida lusitaniae (C. lusitaniae) on different concentrationsofnisin(0.1–3mmol/L),thymol(0.02–1.5mmol/L),carvacrol(0.02–1mmol/L),or cymene(0.02–3mmol/L)inbroths(pH=5,25◦C),andalsoevaluatedtheinhibitoryactivityofthymol againstC.lusitaniaeintomatojuice. Thymol,carvacrol,andcymenetotallyinhibitedtheyeastgrowth formorethan21daysat25◦Cwhentheconcentrationswerehigherthan1mmol/L.Comparedwith thecontrolwithoutthymol,theactivityofthymolagainstC.lusitaniaeintomatojuicewassignificant. Inconclusion,theresultsobtainedfromanumberofinvestigationswithgoodqualityindicated thatthymepossessedeffectiveantimicrobialactivitiesagainstseveralpathogenicandspoilagebacteria andfungi,likeS.aureusandE.coli,withlowMICs(≤1100µL/mL)(Table3).

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Sea Bioresource Exploitation and Utilization Collaborative Innovation Center, [71] tested the antibacterial effects of cinnamon, sodium benzoate,
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