Annual Plant Reviews, Intracellular Signaling in Plants

460 Pages·2008·5.41 MB·English

by  Zhenbiao Yang

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ANNUAL PLANT REVIEWS
VOLUME 33
Intracellular Signaling in Plants.Edited by Zhenbiao Yang

© 2008 Blackwell Publishing Ltd, ISBN: 9781405160025
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ANNUAL PLANT REVIEWS
VOLUME 33
Intracellular Signaling
in Plants
Edited by
Zhenbiao Yang
ProfessorofPlantCellBiology
CenterforPlantCellBiology
UniversityofCalifornia
Riverside,CA,USA
A John Wiley & Sons, Ltd., Publication
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Thiseditionfirstpublished2008
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LibraryofCongressCataloging-in-PublicationData
Intracellularsignalinginplants/editedbyZhenbiaoYang.
p.cm.–(Annualplantreviews,volume33)
Includesbibliographicalreferencesandindex.
ISBN-13:978-1-4051-6002-5(hardback:alk.paper)
ISBN-10:1-4051-6002-0(hardback:alk.paper)1.Plantcellularsignaltransduction.
I.Yang,Zhenbiao,1961-
QK725.I5842008
571.7’42–dc22
2007047501
AcataloguerecordforthisbookisavailablefromtheBritishLibrary
Annualplantreviews(Print)ISSN1460-1494
Annualplantreviews(Online)ISSN1756-9710
Setin10/12PalatinobyAptaraInc.,NewDelhi,India
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AnnualPlantReviews
Aseriesforresearchersandpostgraduatesintheplantsciences.Eachvolume
inthisseriesfocusesonathemeoftopicalimportanceandemphasisisplaced
onrapidpublication.
EditorialBoard:
Prof.JeremyA.Roberts(Editor-in-Chief),PlantScienceDivision,Schoolof
Biosciences,UniversityofNottingham,SuttonBoningtonCampus,
Loughborough,Leicestershire,LE125RD,UK;
DrDavidEvans,SchoolofBiologicalandMolecularSciences,Oxford
BrookesUniversity,Headington,Oxford,OX30BP;
Prof.HidemasaImaseki,Obata-Minami2419,Moriyama-ku,Nagoya463,
Japan;
DrMichaelT.McManus,InstituteofMolecularBioSciences,Massey
University,PalmerstonNorth,NewZealand;
DrJocelynK.C.Rose,DepartmentofPlantBiology,CornellUniversity,
Ithaca,NY14853,USA.
Titlesintheseries:
1. Arabidopsis
EditedbyM.AndersonandJ.A.Roberts
2. BiochemistryofPlantSecondaryMetabolism
EditedbyM.Wink
3. FunctionsofPlantSecondaryMetabolitesandTheirExploitationin
Biotechnology
EditedbyM.Wink
4. MolecularPlantPathology
EditedbyM.DickinsonandJ.Beynon
5. VacuolarCompartments
EditedbyD.G.RobinsonandJ.C.Rogers
6. PlantReproduction
EditedbyS.D.O’NeillandJ.A.Roberts
7. Protein–ProteinInteractionsinPlantBiology
EditedbyM.T.McManus,W.A.Laing,andA.C.Allan
8. ThePlantCellWall
EditedbyJ.K.C.Rose
9. TheGolgiApparatusandthePlantSecretoryPathway
EditedbyD.G.Robinson
10. ThePlantCytoskeletoninCellDifferentiationandDevelopment
EditedbyP.J.Hussey
11. Plant–PathogenInteractions
EditedbyN.J.Talbot
12. PolarityinPlants
EditedbyK.Lindsey
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13. Plastids
EditedbyS.G.Moller
14. PlantPigmentsandTheirManipulation
EditedbyK.M.Davies
15. MembraneTransportinPlants
EditedbyM.R.Blatt
16. IntercellularCommunicationinPlants
EditedbyA.J.Fleming
17. PlantArchitectureandItsManipulation
EditedbyC.G.N.Turnbull
18. Plasmodeomata
EditedbyK.J.Oparka
19. PlantEpigenetics
EditedbyP.Meyer
20. FloweringandItsManipulation
EditedbyC.Ainsworth
21. EndogenousPlantRhythms
EditedbyA.HallandH.McWatters
22. ControlofPrimaryMetabolisminPlants
EditedbyW.C.PlaxtonandM.T.McManus
23. BiologyofthePlantCuticle
EditedbyM.Riederer
24. PlantHormoneSignaling
EditedbyP.HaddenandS.G.Thomas
25. PlantCellSeparationandAdhesion
EditedbyJ.R.RobertsandZ.Gonzalez-Carranza
26. SenescenceProcessesinPlants
EditedbyS.Gan
27. SeedDevelopment,DormancyandGermination
EditedbyK.J.BradfordandH.Nonogaki
28. PlantProteomics
EditedbyC.Finnie
29. RegulationofTranscriptioninPlants
EditedbyK.Grasser
30. LightandPlantDevelopment
EditedbyG.WhitelamandK.J.Halliday
31. PlantMitochondria
EditedbyDavidC.Logan
32. CellCycleControlandPlantDevelopment
EditedbyD.Inze´
33. IntracellularSignalinginPlants
EditedbyZYang
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CONTENTS
Listofcontributors xi
Preface xvi
Acknowledgments xviii
1 TransmembraneReceptorsinPlants:ReceptorKinases
andTheirLigands 1
KeikoU.Torii
1.1 Introduction 1
1.2 ClassificationsoftheRLKsuperfamily 2
1.3 RedundancyandantagonismamongcloselyrelatedRLKs 4
1.4 LigandsforRLKs 7
1.5 Smallpeptides 9
1.6 Cysteine-richextracellularproteins 12
1.7 Otherpossibleligandsandtheir-correspondingreceptors 14
1.8 Ligand–receptorinteractions 15
1.9 Earlyeventsinreceptorkinasesignaling:dynamics
ofreceptoractivation 17
1.10 Earlyeventsinreceptorkinasesignaling:emerging
linktosmallGTP-bindingproteins 20
1.11 Futureperspectives 21
2 HeterotrimericG-Protein-CoupledSignalinginHigherPlants 30
LeiDing,Jin-GuiChen,AlanM.Jones,andSarahM.Assmann
2.1 Introduction 31
2.2 HeterotrimericGproteinsinnonplantsystems 31
2.3 HeterotrimericGproteinsinhigherplants 34
2.4 Conclusionsandfuturedirections 54
3 ROP/RACGTPases 64
YingFu,TsutomuKawasaki,KoShimamoto,andZhenbiaoYang
3.1 Introduction 64
3.2 Structuralconservationanddiversification 66
3.3 Physiologicalfunctionsanddownstreamsignaling 67
3.4 MechanismsfortheregulationoftheROPGTPase
“ON/OFF”status 83
3.5 PotentialupstreamregulatorsofROPsignaling 88
3.6 Futureperspectives 90
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viii (cid:2) Contents
4 Mitogen-ActivatedProteinKinaseCascadesinPlant
IntracellularSignaling 100
ShuqunZhang
4.1 Mitogen-activatedproteinkinasecascadesare
evolutionarilyconservedsignalingmodulesin
eukaryoticcells 100
4.2 HistoryofplantMAPKresearch 101
4.3 PlantMAPKcascades 102
4.4 NegativeregulationofplantMAPKcascades 104
4.5 Importanttools/techniquesinMAPKresearch 105
4.6 BiologicalfunctionsofMAPKcascadesinplants 108
4.7 SignalingspecificityofplantMAPKcascades 124
4.8 Conclusionremarks 126
5 CalciumSignalsandTheirRegulation 137
Zhen-MingPeiandSimonGilroy
5.1 Introduction 137
5.2 Ca2+asasecondmessengerinplants:ofsignatures
andswitches 138
5.3 Ca2+channelsandpumps 141
5.4 DecodingtheCa2+signal 143
5.5 Ca2+andNod-factorsignaling:aroleforkinasesin
decodingtheCa2+signal? 144
5.6 Ca2+uptakeandtransport 149
5.7 SensingextracellularCa2+ 150
5.8 Ca2+,light,andcircadian[Ca2+]oscillations 151
5.9 Conclusionsandperspectives 153
6 ParadigmsandNetworksforIntracellularCalcium
SignalinginPlantCells 163
ShengLuan
6.1 Introduction 163
6.2 CDPKs,plantcalcium“sensorresponders” 165
6.3 CaM:smallcalciumsensorswithavarietyoftarget
proteins 168
6.4 TheCBL–CIPKnetwork 174
6.5 Perspectives:complexnetworksforCa2+decoding
inplantcells 180
7 ReactiveOxygenSignalinginPlants 189
GadMiller,JesseCoutu,VladimirShulaev,andRonMittler
7.1 Introductiontoreactiveoxygenmetabolism 189
7.2 ROSsignalinganditsmodulationbytheROSgene
network 190
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7.3 Subcellularlocalizationandcoordinationofthe
ROSnetwork 194
7.4 KeycomponentsoftheROSgenenetwork
identifiedbyreversegenetics 195
7.5 TheROSsignaltransductionpathwayofplants 195
7.6 Summary 196
8 Lipid-MediatedSignaling 202
WendyF.Boss,DanielV.Lynch,andXueminWang
8.1 Introduction 202
8.2 Plant-specificfeaturesofphosphoinositidesignaling 203
8.3 PhospholipaseDsignaling 217
8.4 Sphingolipidsignaling 224
8.5 Summary 232
9 TheCytoskeletonandSignalTransduction:Roleand
RegulationofPlantActin-andMicrotubule-BindingProteins 244
PatrickJ.HusseyandTakashiHashimoto
9.1 Actincytoskeleton 245
9.2 Actinnucleation 245
9.3 Actin-bindingproteinsthatmodulate
monomer/polymerdynamics 249
9.4 Microtubulecytoskeleton 253
9.5 ROP 254
9.6 Proteinphosphorylation 255
9.7 Calcium 261
9.8 Conclusion 262
10 ThePCIComplexesandtheUbiquitinProteasomeSystem
(UPS)inPlantDevelopment 273
YairHalimiandDanielA.Chamovitz
10.1 Generaloverview 273
10.2 ThePCIcomplexes 274
10.3 PCI/MPNdomain 278
10.4 Inter-PCI-complexrelationships 279
10.5 Ubiquitinandubiquitin-conjugatingcascade 280
10.6 OtherCOP/DETproteins 286
10.7 TheUPSandplantphysiology 288
11 SignalingBetweentheOrganellesandtheNucleus 307
AuroraPin˜as Ferna´ndezandA˚saStrand
11.1 Introduction 307
11.2 Plastid-to-nucleuscommunication 308
11.3 Mitochondria-to-nucleuscommunication 318
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11.4 Emissionoforganellarsignals 321
11.5 Targetsofretrogradecommunication 323
11.6 Organelle-to-organellecommunication 325
11.7 Concludingremarks 327
12 SignalingbyProteinPhosphorylationinCellDivision 336
MichikoSasabeandYasunoriMachida
12.1 Introduction 336
12.2 Progressionofmitosisbycyclin-dependentkinases
inplants 337
12.3 Aurorakinasesinplants 339
12.4 CytokinesismodulatedbytheMAPkinasecascade 345
12.5 Concludingremarks 351
13 GuardCellSignaling 362
YanWu
13.1 Introduction 362
13.2 ABA-mediatedguardcellsignaling 364
13.3 CO signalinginguardcells 373
2
13.4 Lightsignalinginguardcells 375
13.5 Innateimmunityinguardcells 377
13.6 ExtracellularCa2+sensinginguardcells 378
13.7 Conclusionsandprospects 379
14 TheMolecularNetworksofAbioticStressSignaling 388
ZhizhongGong,ViswanathanChinnusamy,andJian-KangZhu
14.1 Introduction 389
14.2 Abscisicacid 389
14.3 Themolecularmechanismsofsalttolerance 395
14.4 Thetranscriptionalregulationofcold-and
drought-induciblegenes 398
14.5 Oxidativestressmanagement 402
14.6 Posttranscriptionlregulationofgeneexpression 403
14.7 Futureperspectives 406
Index 417
Colorplate(betweenpages174and175)