THE ROLE OF TRANSCRIPTION FACTOR STOX1A IN TRANSCRIPTIONAL NETWORKS ASSOCIATED WITH NEURODEGENERATION Daan van Abel The studies described in this thesis were carried out at the Department of Clinical Chemistry, Pathology and Molecular Biology Laboratory (MBL), VU University Medical Center, Amsterdam, The Netherlands. Printing of this thesis was kindly supported by: Alzheimer Nederland (Bunnik) Internationale Stichting Alzheimer Onderzoek Clinical Chemistry Department VUMC, Amsterdam, The Netherlands ISBN: Layout: Daan van Abel; Cover Design: Bas van Abel Printing: Ipskamp Drukkers Copyright © 2012 Daan van Abel. All rights reserved VRIJE UNIVERSITEIT THE ROLE OF TRANSCRIPTION FACTOR STOX1A IN TRANSCRIPTIONAL NETWORKS ASSOCIATED WITH NEURODEGENERATION ACADEMISCH PROEFSCHRIFT ter verkrijging van de graad Doctor aan de Vrije Universiteit Amsterdam, op gezag van rector magnificus prof.dr. L.M. Bouter, in het openbaar te verdedigen ten overstaan van de promotiecommissie van de Faculteit der Geneeskunde op woensdag 19 september 2012 om 15.45 uur in de aula van de universiteit, de Boelelaan 1105 door Daan van Abel geboren te Nijmegen promotor: prof.dr. C.B.M. Oudejans copromotor: dr. M. van Dijk reading committee: dr. N.Ameziane prof.dr. M.A. Blankenstein prof.dr. A.J Rozemuller dr. W. Scheper prof.dr. J.C van Swieten dr. R.M.F. Wolthuis Vaak hebben invalletjes van één regel weinig om het lijf Van Kooten & De Bie Contents Chapter 1 General Introduction 11 Aims and Outline 22 Chapter 2 Direct downregulation of CNTNAP2 by STOX1A is 33 associated with Alzheimer’s disease. Journal of Alzheimer’s Disease (Accepted), 2012 Chapter 3 SFRS7-mediated splicing of tau exon 10 is directly regulated 55 by STOX1A in glial cells. PloS ONE, 2011 Chapter 4 Transcription factor STOX1A promotes mitotic entry by 75 binding to the CCNB1 promotor. PloS ONE, 2012 Chapter 5 STOX1A induces phosphorylation of tau proteins at epitopes 91 hyperphosphorylated in Alzheimer’s disease. Submitted Chapter 6 RNA-seq transcriptome analysis of STOX1A induced 105 differential expression in neuronal cells. In Preparation Chapter 7 Summarizing Discussion 127 Directions for Future Work 130 Appendices Nederlandse Samenvatting 140 List of Publications 145 Curriculum Vitae 147 Dankwoord 148 1
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