MICROBIOLOGICAL AND FUNCTIONAL ASPECTS Fourth Edition MICROBIOLOGICAL AND FUNCTIONAL ASPECTS Fourth Edition SAMPO LAHTINEN • ARTHUR C. OUWEHAND SEPPO SALMINEN • ATTE VON WRIGHT Boca Raton London New York CRC Press is an imprint of the Taylor & Francis Group, an informa business CRC Press Taylor & Francis Group 6000 Broken Sound Parkway NW, Suite 300 Boca Raton, FL 33487-2742 © 2012 by Taylor & Francis Group, LLC CRC Press is an imprint of Taylor & Francis Group, an Informa business No claim to original U.S. Government works Printed in the United States of America on acid-free paper Version Date: 20111003 International Standard Book Number: 978-1-4398-3677-4 (Hardback) This book contains information obtained from authentic and highly regarded sources. Reasonable efforts have been made to publish reliable data and information, but the author and publisher cannot assume responsibility for the validity of all materials or the consequences of their use. 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CCC is a not-for-profit organization that provides licenses and registration for a variety of users. For organizations that have been granted a photocopy license by the CCC, a separate system of payment has been arranged. Trademark Notice: Product or corporate names may be trademarks or registered trademarks, and are used only for identifica- tion and explanation without intent to infringe. Library of Congress Cataloging‑in‑Publication Data Lactic acid bacteria : microbiological and functional aspects / [edited by] Seppo Salminen … [et al.]. -- 4th ed. p. ; cm. “A CRC title.” Includes bibliographical references and index. Summary: “Updated with the substantial progress made in lactic acid and bacteria research since the third edition, this fourth volume discusses improved insights in genetics and new molecular biological techniques. Thoroughly reorganized, this book incorporates the recent changes in new molecular techniques and the mechanistic understanding of probiotic functionality. The book remains firmly grounded in the basics of lactic acid bacteria; their genetics and taxonomy, their application in food and feed preparation, their health properties, and the legal issues associated with their use”--Provided by publisher. ISBN 978-1-4398-3677-4 (hardback : alk. paper) I. Salminen, Seppo. [DNLM: 1. Lactobacillus--genetics. 2. Food Microbiology. 3. Lactobacillales--genetics. 4. Molecular Diagnostic Techniques. QW 142.5.A8] 579.37--dc23 2011039811 Visit the Taylor & Francis Web site at http://www.taylorandfrancis.com and the CRC Press Web site at http://www.crcpress.com Contents Preface ..................................................................................................................................ix Editors ..................................................................................................................................xi Contributors ......................................................................................................................xiii 1 Lactic Acid Bacteria: An Introduction .........................................................................1 AttE Von WrIght And LArs AxELsson 2 genetics of Lactic Acid Bacteria .................................................................................17 LorEnzo MorELLI, MArIA LuIsA CALLEAgrI, FInn KVIst VogEnsEn, And AttE Von WrIght 3 Potential Applications of Probiotic, Bacteriocin-Producing Enterococci and Their Bacteriocins.......................................................................................................39 AndrEA LAuKoVá 4 genus Lactococcus ......................................................................................................63 AttE Von WrIght 5 genus Lactobacillus ...................................................................................................77 rodoLPhE BArrAngou, sAMPo J. LAhtInEn, FAndI IBrAhIM, And Arthur C. ouWEhAnd 6 The Lesser LAB gods: Pediococcus, Leuconostoc, Weissella, Carnobacterium, and Affiliated genera .................................................................................................93 gEErt huys, JørgEn LEIsnEr, And JohAnnA BJörKroth 7 Streptococcus: A Brief update on the Current taxonomic status of the genus .......123 John r. tAgg, PhILIP A. WEsCoMBE, And JErEMy P. Burton 8 Bifidobacteria: general overview on Ecology, taxonomy, and genomics ..............147 MArCo VEnturA, FrAnCEsCA turronI, And douWE VAn sIndErEn 9 Bacteriophage and Anti-P hage Mechanisms in Lactic Acid Bacteria .......................165 susAn MILLs, r. PAuL ross, horst nEVE, And AIdAn CoFFEy 10 Lactic Acid Bacteria in Vegetable Fermentations .....................................................187 Kun-young PArK And Boh Kyung KIM v vi ◾ Contents 11 Current Challenges for Probiotics in Food ..............................................................213 JEAn-MIChEL AntoInE 12 Lactic Acid Bacteria in Cereal-Based Products ........................................................227 hAnnu sALoVAArA And MIChAEL gänzLE 13 Lactic Acid Bacteria in Meat Fermentations ............................................................247 CECILIA FontAnA, sILVInA FAddA, PIEr sAndro CoCConCELLI, And grACIELA VIgnoLo 14 Examples of Lactic- Fermented Foods of the African Continent ..............................265 ChArLEs M.A.P. FrAnz And WILhELM h. hoLzAPFEL 15 Antimicrobial Components of Lactic Acid Bacteria .................................................285 IngoLF F. nEs, MortEn KJos, And dzung BAo dIEP 16 Atherosclerosis and gut Microbiota: A Potential target for Probiotics ..................331 ChAn yEE KWAn, PIrKKA KIrJAVAInEn, ChEn yAn, And hAnI EL-nEzAMI 17 Lactic Acid Bacteria (LAB) in grape Fermentations—An Example of LAB as Contaminants in Food Processing ..........................................................................343 EVELInE BArtoWsKy 18 stability of Lactic Acid Bacteria in Foods and supplements ....................................361 MIguEL guEIMondE, CLArA g. dE Los rEyEs- gAVILán, And BorJA sánChEz 19 Lactic Acid Bacteria in the gut ................................................................................385 MArIA stoLAKI, WILLEM M. dE Vos, MIChIEL KLEErEBEzEM, And ErWIn g. zoEtEndAL 20 Lactic Acid Bacteria in oral health .........................................................................403 JuKKA h. MEurMAn And IVA stAMAtoVA 21 some Considerations for the safety of novel Probiotic Bacteria .............................423 dIAnA C. donohuE And MIguEL guEIMondE 22 Probiotics and human Immune Function ...............................................................439 hArshArnJIt s. gILL, JAyA PrAsAd, And osAAnA donKor 23 gastrointestinal Benefits of Probiotics—Clinical Evidence ....................................509 AnnA LyrA, sAMPo LAhtInEn, And Arthur C. ouWEhAnd 24 human studies on Probiotics: Infants and Children ...............................................525 hAnIA szAJEWsKA 25 human studies on Probiotics and Endogenous Lactic Acid Bacteria in the urogenital tract ......................................................................................................543 WAynE L. MILLEr And grEgor rEId 26 Lactic Acid Bacteria and Blood Pressure ..................................................................561 PAuLIInA EhLErs And rIIttA KorPELA Contents ◾ vii 27 Probiotics for Companion Animals ..........................................................................579 MInnA rInKInEn 28 Prevalence and Application of Lactic Acid Bacteria in Aquatic Environments ........593 héLènE L. LAuzon And EInAr rIngø 29 Probiotics for Farm Animals ....................................................................................633 ALoJz BoMBA, rAdoMÍrA nEMCoVá, LAdIsLAV stroJný, And dAgMAr MudroŇoVá 30 health Effects of nonviable Probiotics ....................................................................671 sAMPo J. LAhtInEn And AKIhIto Endo 31 Probiotics: safety and Efficacy .................................................................................689 sEPPo sALMInEn And AttE Von WrIght 32 Probiotics regulation in Asian Countries ................................................................705 yuAn Kun LEE, WEI shAo, su JIn, yAn WEn, BArnA gAnguLy, EndAng s. rAhAyu, osAMu ChonAn, KoIChI WAtAnABE, gEun Eog JI, MyEong soo PArK, rAhA ABd rAhIM, hooI LIng Foo, JuLIE d. tAn, MIng-Ju ChEn, And sunEE nItIsInPrAsErt 33 regulation of Probiotic and Probiotic health Claims in south America ................749 CéLIA LuCIA dE LuCEs FortEs FErrEIrA And MArCELo BonnEt Index .................................................................................................................................761 Preface The previous editions of this book have never looked very much like their predecessors, and this fourth edition is no exception. Due to the accumulation of new findings during the seven years that has passed since the previous update, practically all chapters are either completely rewritten or are totally new. We (the editors) and the contributors have strived to reach a proper balance between the well-established “eternal truths” and the novel and even controversial findings. While keeping the format of individual chapters as reviews, a certain compromise between comprehen- siveness and readability has been aimed at in order to avoid an excessive length and too massive a size of the volume. In addition to purely scientific aspects related to lactic acid bacteria and their applications, the regulatory framework related to their safety and efficacy, particularly in probiotic use, has also been reviewed. We hope that the book will find its audience both as an introduction to the field for an advanced student and as a handbook for microbiologists, food scientists, nutri- tionists, clinicians, and regulatory experts. The editors are indebted to Dr. Anna Lyra for skillful and tireless help with the editorial process. Sampo Lahtinen Seppo Salminen Arthur Ouwehand Atte von Wright ix Editors Seppo Salminen is a Professor and the Director of Functional Foods Forum at the University of Turku, Finland, and a visiting professor at the RMIT University, Melbourne, Australia, and Universität für Bodenkultur, Vienna, Austria. He is the author of numerous journal articles and book chapters, and the editor or a coeditor of several books. He has served in several scientific expert committees and working groups of the European Food Safety Authority and other interna- tional committees including ILSI Europe and International Dairy Federation. Professor Salminen received his M.S. degree (1978) in food science from Washington State University, Pullman, the M.Sc. degree (1979) in food chemistry and technology from the University of Helsinki, Finland, and the Ph.D. degree (1982) in biochemistry and toxicology from the University of Surrey, UK. Professor Atte von Wright graduated from the University of Helsinki (Helsinki, Finland) in 1975 and obtained his Ph.D. in microbiology in 1981 at the University of Sussex, UK. He has a professional background both in industry and academia with research interests spanning from food toxicology to molecular biology and safety aspects of lactic acid bacteria. Since 1998, Atte von Wright has been a Professor of Nutritional and Food Biotechnology at the University of Kuopio (since 2010, the University of Eastern Finland), Kuopio, Finland. He has also served in many expert functions of the EU (a member of the Scientific Committee of Animal Nutrition, 1997–2003; a member of the EFSA Scientific Panel on additives and products or substances used in animal feed, 1996–2009; and a member of the EFSA Scientific Panel on Genetically Modified Organisms from 2009 onward). He has more than 120 original scientific publications and reviews in international refereed journals. Dr. Sampo Lahtinen is a Health & Nutrition Group Manager at Danisco Health & Nutrition, Kantvik, Finland. He has a professional background both from industry and academia with a focus on probiotic and intestinal bacteria, prebiotics, and functional foods, in general. He received his Ph.D. degree (2007) in Food Chemistry from the University of Turku, Finland, and was nominated in 2009 as an Adjunct Professor of Applied Microbiology of the University of Turku. He is the author of more than 50 journal articles and book chapters on probiotics and prebiotics. Dr. Arthur Ouwehand is an R&D group manager at Danisco Health & Nutrition in Kantvik, Finland. He has a research background in both academia and industry. His main interest is on functional foods, in particular, probiotics and prebiotics and their influence on the intestinal microbiota. He is active in the International Life Sciences Institute Europe, the International xi xii ◾ Editors Dairy Federation, and the International Scientific Association for Probiotics and Prebiotics. Dr. Ouwehand received his M.S. degree (1992) in cell biology from Wageningen University (the Netherlands) and his Ph.D. degree (1996) in microbiology from Göteborg University (Sweden). In 1999, he was appointed as an Adjunct Professor in Applied Microbiology at the University of Turku (Finland), and he is the author of more than 150 journal articles and book chapters. Contributors Jean-Michel Antoine Jeremy P. Burton Danone Research BLIS Technologies Ltd, Centre for Innovation Palaiseau, France University of Otago Dunedin, New Zealand Lars Axelsson Nofima, The Norwegian Institute of Food, Maria Luisa Calleagri Fisheries and Aquaculture Research Facoltà di Agraria Ås, Norway Universita Cattolica di Sacro Cuore Piacenza, Italy Rodolphe Barrangou Danisco USA Inc. Ming-Ju Chen Madison, Wisconsin Department of Animal Science and Technology Eveline Bartowsky National Taiwan University The Australian Wine Research Institute Taipei, Taiwan Adelaide, Australia Osamu Chonan Johanna Björkroth Yakult Central Institute for Microbiological Department of Food Hygiene and Research Environmental Health, Faculty of Tokyo, Japan Veterinary Medicine University of Helsinki Pier Sandro Cocconcelli Helsinki, Finland Istituto di Microbiologia, Centro Ricerche Biotechnologiche Alojz Bomba Universitá Cattolica del Sacro Cuore Department of Experimental Medicine, Piacenza-Cremona, Italy Faculty of Medicine Pavol Jozef Šafárik University in Košice Aidan Coffey Košice, Slovakia Department of Biological Sciences Cork Institute of Technology Marcelo Bonnet Bishopstown, Ireland Dairy Cattle Research Unit Brazilian Agricultural Research Corporation-EMBRAPA Juiz de Fora, Brazil xiii
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