FEMS Microbiology Reviews 1994: Vol 13 Index

10 Pages·1994·2.6 MB·English

471
FEMS Microbiology Reviews
AUTHOR INDEX VOL. 13
Akamatsu, Y., see Shimada, M. (13) 285 Duarte, J.C.
Ambert, K., see Ruel, K. (13) 241 Lignin biodegradation and transformation (13) 121
Ander, P. Dutton, M.V., see Evans, C.S. (13) 235
Concluding Remarks (13) 387
Ander, P. Elder, D.J.E. and Kelly, D.J.
The cellobiose-oxidizing enzymes CBQ and CbO as re- The bacterial degradation of benzoic acid and benzenoid
lated to lignin and cellulose degradation — a review (13) compounds under anaerobic conditions: Unifying trends
297 and new perspectives (13) 441
Aubert, J.-P., see Béguin, P. (13) 25 Eriksson, G., see Lundgren, K.R. (13) 365
Evans, C.S., Dutton, M.V., Guillén, F. and Veness, R.G.
Barraquio, W.L., see Chan, Y.-K. (13) 95 Enzymes and small molecular mass agents involved with
Barrasa, J.M., see Martinez, A.T. (13) 265 lignocellulose degradation (13) 235
Bartfai, T., see Lundgren, K.R. (13) 365
Béguin, P. and Aubert, J.-P. Field, J.A., see De Jong, E. (13) 153
The biological degradation of cellulose (13) 25 Fluit, A.C., see Wolfhagen, M.J.H.M. (13) 59
Bergkvist, L., see Lundgren, K.R. (13) 365
Birch, P., see Broda, P. (13) 189 Gharibian, S., see Joseleau, J.-P. (13) 255
Broda, P., Birch, P., Brooks, P., Copa-Patino, J.L., Sinnott, Gittins, J.R., Phoenix, D.A. and Pratt, J.M.
M.L., Tempelaars, C., Wang, Q., Wyatt, A. and Sims, P. Multiple mechanisms of membrane anchoring of Es-
Phanerochaete chrysosporium and its natural substrate (13) cherichia coli penicillin-binding proteins (13) 1
189 Guillén, F., see Evans, C.S. (13) 235
Brook, I. Guillén, F., see Martinez, A.T. (13) 265
The role of encapsulated anaerobic bacteria in synergistic Gutiérrez, A., see Martinez, A.T. (13) 265
infections (13) 65
Brooks, P., see Broda, P. (13) 189 Hatakka, A.
Bullerjahn, G.S., see Post, A.F. (13) 393 Lignin-modifying enzymes from selected white-rot fungi:
production and role in lignin degradation (13) 125
Camarero, S., see Martinez, A.T. (13) 265 Hatakka, A.I., see Schoemaker, H.E. (13) 321
Chan, Y.-K., Barraquio, W.L. and Knowles, R. Hattori, T., see Shimada, M. (13) 285
N,-fixing pseudomonads and related soil bacteria (13) 95 Hodgman, S., see Lundgren, K.R. (13) 365
Comtat, J., see Joseleau, J.-P. (13) 255
Copa-Patifo, J.L., see Broda, P. (13) 189 Joseleau, J.-P., Gharibian, S., Comtat, J., Lefebvre, A. and
Costa-Ferreira, M., see Duarte, J.C. (13) 377 Ruel, K.
Indirect involvement of ligninolytic enzyme systems in cell
wall degradation (13) 255
Daniel, G.
’ Use of electron microscopy for aiding our understanding Joseleau, J.-P., see Ruel, K. (13) 241
of wood biodegradation (13) 199 Jéves, H., see Lundgren, K.R. (13) 365
De Bont, J.A.M., see De Jong, E. (13) 153
De Jong, E., Field, J.A. and De Bont, J.A.M. Kantelinen, A., see Viikari, L. (13) 335
Aryl alcohols in the physiology of ligninolytic fungi (13) Kelly, D.J., see Elder, D.J.E. (13) 441
153 Knowles, R., see Chan, Y.-K. (13) 95
Drancourt, M. and Raoult, D. Kramer, R.
Taxonomic position of the Rickettsiae: Current knowledge Secretion of amino acids by bacteria: Physiology and
(13) 13 mechanism (13) 75
D’Souza, T.M., see Reddy, C.A. (13) 137
Duarte, J.C. and Costa-Ferreira, M. Lefebvre, A., see Joseleau, J.-P. (13) 255
Aspergilli and lignocellulosics: Enzymology and biotechno- Linko, M., see Viikari, L. (13) 335
logical applications (13) 377 Lundell, T.K., see Schoemaker, H.E. (13) 321
472
Lundgren, K.R., Bergkvist, L., H6gman, S., Joves, H., Eriks- Rosenberg, E., see Lundgren, K.R. (13) 365
son, G., Bartfai, T., Van der Laan, J., Rosenberg, E. and Ruel, K., Ambert, K. and Joseleau, J.-P.
Shoham, Y. Influence of the enzyme equipment of white-rot fungi on
TCF Mill Trial on softwood pulp with Korsnas_ ther- the patterns of wood degradation (13) 241
mostable and alkaline stable xylanase T6 (13) 365 Ruel, K., see Joseleau, J.-P. (13) 255
Ruel, K., see Martinez, A.T. (13) 265
Ma, D.-B., see Shimada, M. (13) 285
Martinez, A.T., Camarero, S., Guillén, F., Gutiérrez, A.,
Schoemaker, H.E., Lundell, T.K., Hatakka, A.I. and Piontek,
Munoz, C., Varela, E., Martinez, M.J., Barrasa, J.M.,
K.
Ruel, K. and Pelayo, J.M.
The oxidation of veratryl alcohol, dimeric lignin models
Progress in biopulping of non-woody materials: Chemical,
and lignin by lignin peroxidase: The redox cycle revisited
enzymatic and ultrastructural aspects of wheat straw delig-
(13) 321
nification with ligninolytic fungi from the genus Pleurotus
Shimada, M., Ma, D.-B., Akamatsu, Y. and Hattori, T.
(13) 265
A proposed role of oxalic acid in wood decay systems of
Martinez, M.J., see Martinez, A.T. (13) 265
wood-rotting basidiomycetes (13) 285
Messner, K. and Srebotnik, E.
Shoham, Y., see Lundgren, K.R. (13) 365
Biopulping: An overview of developments in an environ-
Sims, P., see Broda, P. (13) 189
mentally safe paper-making technology (13) 351
Sinnott, M.L., see Broda, P. (13) 189
Monties, B.
Srebotnik, E., see Messner, K. (13) 351
Chemical assessment of lignin biodegradation some quali-
Sundquist, J., see Viikari, L. (13) 335
tative and quantitative aspects (13) 277
Munoz, C., see Martinez, A.T. (13) 265
Tempelaars, C., see Broda, P. (13) 189
Oren, A. Torensma, R., see Wolfhagen, M.J.H.M. (13) 59
The ecology of the extremely halophilic archaea (13) 415
Van der Laan, J., see Lundgren, K.R. (13) 365
Paice, M.G., see Reid, I.D. (13) 369
Varela, E., see Martinez, A.T. (13) 265
Pelayo, J.M., see Martinez, A.T. (13) 265
Veness, R.G., see Evans, C.S. (13) 235
Phoenix, D.A., see Gittins, J.R. (13) 1
Verhoef, J., see Wolfhagen, M.J.H.M. (13) 59
Piontek, K., see Schoemaker, H.E. (13) 321
Viikari, L., Kantelinen, A., Sundquist, J. and Linko, M.
Post, A.F. and Bullerjahn, G.S.
Xylanases in bleaching: From an idea to the industry (13)
The photosynthetic machinery in Prochlorophytes: Struc-
335
tural properties and ecological significance (13) 393
Pratt, J.M., see Gittins, J.R. (13) 1
Wang, Q., see Broda, P. (13) 189
Raoult, D., see Drancourt, M. (13) 13 Wolfhagen, M.J.H.M., Torensma, R., Fluit, A.C. and Ver-
Reddy, C.A. and D’Souza, T.M. hoef, J.
Physiology and molecular biology of the lignin peroxidases Toxins A and B of Clostridium difficile (13) 59
of Phanerochaete chrysosporium (13) 137 Wood, P.M.
Reid, I.D. and Paice, M.G. Pathways for production of Fenton’s reagent by wood-rot-
Biological bleaching of kraft pulps by white-rot fungi and ting fungi (13) 313
their enzymes (13) 369 Wyatt, A., see Broda, P. (13) 189
473
FEMS Microbiology Reviews
SUBJECT INDEX VOL. 13
Abscess B(1 — 3)-glucanase
Bacteroides sp.; Capsule; Virulence; Anaerobic bacteria; Syn- Phanerochaete chrysosporium; Lignocellulose; Lignin; Cel-
ergism (Brook, I. (13) 65) lobiohydrolase; Xylanolytic system; Transformation (Broda, P.
(13) 189)
Amino acid secretion
Transport; Bioenergetics; Kinetics; Coryneform bacteria; Biobleaching
Transport mechanism (Kramer, R. (13) 75) Aspergillus spp.; Lignocellulosic material; Xylanases; Biopulp-
ing; Industrial waste water treatment (Duarte, J.C. (13) 377)
Anaerobic bacteria
Bioenergetics
Bacteroides sp.; Capsule; Abscess; Virulence; Synergism
Transport; Amino acid secretion; Kinetics; Coryneform bacte-
(Brook, I. (13) 65)
ria; Transport mechanism (Kramer, R. (13) 75)
Anaerobic metabolism
Biopulping
Aromatic compounds; Rhodopseudomonas palustris; Denitrify-
Lignin biodegradation; Pleurotus eryngii; Phanerochaete
ing pseudomonads (Elder, D.J.E. (13) 441)
chrysosporium; Wheat straw; Aryl-alcohol oxidase; Laccase;
Ultrastructure (Martinez, A.T. (13) 265)
Anchoring mechanisms
Penicillin-binding proteins; Escherichia coli; Membrane pro- White rot fungi; Lignin degradation; Ultrastructure; Ceripori-
teins (Gittins, J.R. (13) 1) opsis subvermispora; Phanerochaete chrysosporium (Messner,
K. (13) 351)
Aromatic compounds
Anaerobic metabolism; Rhodopseudomonas palustris; Denitri- Aspergillus spp.; Lignocellulosic material; Xylanases; Bio-
fying pseudomonads (Elder, D.J.E. (13) 441) bleaching; Industrial waste water treatment (Duarte, J.C. (13)
377)
Aryl-alcohol oxidase
Biopulping; Lignin biodegradation; Pleurotus eryngii; Phane- Bleaching
Xylanases; Kraft pulp (Viikari, L. (13) 335)
rochaete chrysosporium; Wheat straw; Laccase; Ultrastructure
(Martinez, A.T. (13) 265)
Hemicellulase; pH optimum; Temperature optimum; Xy-
lanase (Lundgren, K.R. (13) 365)
Aspergillus spp.
Lignocellulosic material; Xylanases; Biopulping; Biobleach-
Delignification; Laccase; Manganese peroxidase; Trametes
ing; Industrial waste water treatment (Duarte, J.C. (13) 377)
(Reid, I.D. (13) 369)
Bacterial decay
Brown rot
Transmission electron microscopy; Scanning electron mi-
Transmission electron microscopy; Scanning electron mi-
croscopy; Wood biodegradation; White rot; Brown rot; Soft
croscopy; Wood biodegradation; White rot; Soft rot; Bacterial
rot; EDXA; Immunogold cytochemistry (Daniel, G. (13) 199)
decay; EDXA; Immunogold cytochemistry (Daniel, G. (13)
199)
Bacteroides sp.
Capsule; Abscess; Virulence; Anaerobic bacteria; Synergism Brown-rot fungi
(Brook, I. (13) 65) Lignocellulose degradation; Hydrogen peroxide; Oxalate;
White-rot fungi (Evans, C.S. (13) 235)
Basidiomycete
Veratryl alcohol; Lignin degradation; Phanerochaete chryso- Capsule
sporium; Chlorinated aromatics; Mediator (De Jong, E. (13) Bacteroides sp.; Abscess; Virulence; Anaerobic bacteria; Syn-
153) ergism (Brook, I. (13) 65)
474
Cellobiohydrolase Chlorophyll a/b antenna
Phanerochaete chrysosporium; Lignocellulose; Lignin; BU > Prochlorophytes; Light harvesting; Thylakoid organization;
3)-glucanase; Xylanolytic system; Transformation (Broda, P. Phylogeny; Ecological physiology (Post, A.F. (13) 393)
(13) 189)
Clostridium difficile
Cellobiose dehydrogenase Toxin A; Toxin B; Mechanism; Receptor (Wolfhagen,
Cellobiose:quinone oxidoreductase; Cellobiose oxidase; Lignin M.J.H.M. (13) 59)
degradation; Cellulose degradation; Fenton’s reagent; Hy-
droxyl radical; Peroxidases; Laccase (Ander, P. (13) 297)
Condensed and non-condensed units
Molecular structure of lignin; Ester and ether linked phenolic
Fenton reaction; Hydroxyl radicals; Lignocellulose break- acids; Peroxidasic degradation of lignin; Peroxidase;
down; Phanerochaete chrysosporium (Wood, P.M. (13) 313) Horseradish peroxidase; Phanerochaete chrysosporium (Mon-
ties, B. (13) 277)
Cellobiose oxidase
Cellobiose:quinone oxidoreductase; Cellobiose dehydroge- Coryneform bacteria
nase: Lignin degradation; Cellulose degradation; Fenton’s Transport; Amino acid secretion; Bioenergetics; Kinetics;
reagent; Hydroxyl radical; Peroxidases; Laccase (Ander, P. Transport mechanism (Kramer, R. (13) 75)
(13) 297)
Delignification
Cellobiose:quinone oxidoreductase
Bleaching; Laccase; Manganese peroxidase; Trametes (Reid,
Cellobiose oxidase; Cellobiose dehydrogenase; Lignin degra-
I.D. (13) 369)
dation; Cellulose degradation; Fenton’s reagent; Hydroxyl
radical; Peroxidases; Laccase (Ander, P. (13) 297)
Denitrification
H, oxidation; N, fixation; Pseudomonas species; Rhizo-
Cellulases
sphere; Taxonomy (Chan, Y.-K. (13) 95)
Cellulose; Cellulolytic microorganisms; Multidomain proteins;
Cellulosome (Béguin, P. (13) 25)
Denitrifying pseudomonads
Anaerobic metabolism; Aromatic compounds; Rhodopseu-
Cellulolytic microorganisms
domonas palustris (Elder, D.J.E. (13) 441)
Cellulose; Cellulases; Multidomain proteins; Cellulosome
(Béguin, P. (13) 25)
Ecological physiology
Prochlorophytes; Chlorophyll a/b antenna; Light harvesting;
Cellulose
Thylakoid organization; Phylogeny (Post, A.F. (13) 393)
Cellulolytic microorganisms; Cellulases; Multidomain pro-
teins; Cellulosome (Béguin, P. (13) 25)
Ecology
Halobacterium; Haloferax; Haloarcula; Haloalkaliphiles
Cellulose degradation
(Oren, A. (13) 415)
Cellobiose:quinone oxidoreductase; Cellobiose oxidase; Cel-
lobiose dehydrogenase; Lignin degradation; Fenton’s reagent;
Hydroxyl radical; Peroxidases; Laccase (Ander, P. (13) 297) EDXA
Transmission electron microscopy; Scanning electron mi-
Cellulosome croscopy; Wood biodegradation; White rot; Brown rot: Soft
Cellulose; Cellulolytic microorganisms; Cellulases; Multido- rot; Bacterial decay; Immunogold cytochemistry (Daniel, G.
main proteins (Béguin, P. (13) 25) (13) 199)
Cell wall Electron microscopy
White-rot fungi; Enzymes; Ultrastructural modification (Ruel, Hydroxyl radical; Fenton’s reagent; Manganese III complex;
K. (13) 241) Lignocellulose oxidation (Joseleau, J.-P. (13) 255)
Ceriporiopsis subvermispora Enzyme regulation
Biopulping; White rot fungi; Lignin degradation; Ultrastruc- Lignin; White-rot fungi; Lignin peroxidase; Manganese perox-
ture; Phanerochaete chrysosporium (Messner, K. (13) 351) idase; Laccase (Hatakka, A. (13) 125)
Chlorinated aromatics Enzymes
Veratryl alcohol; Lignin degradation; Phanerochaete chryso- White-rot fungi; Ultrastructural modification; Cell wall (Ruel,
sporium; Basidiomycete; Mediator (De Jong, E. (13) 153) K. (13) 241)
475
Escherichia coli Hemicellulase
Penicillin-binding proteins; Membrane proteins; Anchoring Bleaching; pH optimum; Temperature optimum; Xylanase
mechanisms (Gittins, J.R. (13) 1) (Lundgren, K.R. (13) 365)
pH optimum
Ester and ether linked phenolic acids
Bleaching; Hemicellulase; Temperature optimum; Xylanase
Molecular structure of lignin; Condensed and non-condensed
(Lundgren, K.R. (13) 365)
units; Peroxidasic degradation of lignin; Peroxidase; Horse-
radish peroxidase; Phanerochaete chrysosporium (Monties, B.
Horseradish peroxidase
(13) 277)
Molecular structure of lignin; Condensed and non-condensed
units; Ester and ether linked phenolic acids; Peroxidasic
Fenton reaction
degradation of lignin; Peroxidase; Phanerochaete chrysospo-
Cellobiose dehydrogenase; Hydroxyl radicals; Lignocellulose
rium (Monties, B. (13) 277)
breakdown; Phanerochaete chrysosporium (Wood, P.M. (13)
313)
H, oxidation
Denitrification; N, fixation; Pseudomonas species; Rhizo-
Fenton’s reagent sphere; Taxonomy (Chan, Y.-K. (13) 95)
Hydroxyl radical; Manganese III complex; Lignocellulose oxi-
dation; Electron microscopy (Joseleau, J.-P. (13) 255) Hydrogen peroxide
Lignocellulose degradation; Oxalate; White-rot fungi; Brown-
Cellobiose:quinone oxidoreductase; Cellobiose oxidase; Cel- rot fungi (Evans, C.S. (13) 235)
lobiose dehydrogenase; Lignin degradation; Cellulose degra-
dation; Hydroxyl radical; Peroxidases; Laccase (Ander, P. (13) Hydroxyl radical
297) Fenton’s reagent; Manganese III complex; Lignocellulose oxi-
dation; Electron microscopy (Joseleau, J.-P. (13) 255)
Fungal transformation
Cellobiose:quinone oxidoreductase; Cellobiose oxidase; Cel-
Lignin peroxidase genes; White-rot fungi; Phanerochaete
lobiose dehydrogenase; Lignin degradation; Cellulose degra-
chrysosporium; Manganese-dependent peroxidase; Karyotyp-
dation; Fenton’s reagent; Peroxidases; Laccase (Ander, P. (13)
ing; Gene regulation (Reddy, C.A. (13) 137)
297)
Gene regulation
Cellobiose dehydrogenase; Fenton reaction; Lignocellulose
Lignin peroxidase genes; White-rot fungi; Phanerochaete
breakdown; Phanerochaete chrysosporium (Wood, P.M. (13)
chrysosporium; Fungal transformation; Manganese-dependent
313)
peroxidase; Karyotyping (Reddy, C.A. (13) 137)
Immunogold cytochemistry
Glyoxylate oxidase Transmission electron microscopy; Scanning electron mi-
Oxalic acid; Veratryl alcohol; Lignin peroxidase; Manganese croscopy; Wood biodegradation; White rot; Brown rot; Soft
peroxidase; Oxaloacetase; Wood-rotting basidiomycetes rot; Bacterial decay; EDXA (Daniel, G. (13) 199)
(Shimada, M. (13) 285)
Industrial waste water treatment
Aspergillus spp.; Lignocellulosic material; Xylanases; Biopulp-
Haloalkaliphiles
ing; Biobleaching (Duarte, J.C. (13) 377)
Halobacterium; Haloferax; Haloarcula; Ecology (Oren, A. (13)
415)
Involvement of carbohydrate residues
Lignin peroxidase redox cycle; Veratryl alcohol as a mediator;
Haloarcula
Marcus theory; Long-range electron transfer (Schoemaker,
Halobacterium; Haloferax; Haloalkaliphiles; Ecology (Oren,
H.E. (13) 321)
A. (13) 415)
Karyotyping
Halobacterium Lignin peroxidase genes; White-rot fungi; Phanerochaete
Haloferax; Haloarcula; Haloalkaliphiles; Ecology (Oren, A. chrysosporium; Fungal transformation; Manganese-dependent
(13) 415) peroxidase; Gene regulation (Reddy, C.A. (13) 137)
Haloferax Kinetics
Halobacterium; Haloarcula; Haloalkaliphiles; Ecology (Oren, Transport; Amino acid secretion; Bioenergetics; Coryneform
A. (13) 415) bacteria; Transport mechanism (Kramer, R. (13) 75)
476
Kraft pulp Lignin peroxidase genes
Bleaching; Xylanases (Viikari, L. (13) 335) White-rot fungi; Phanerochaete chrysosporium; Fungal trans-
formation; Manganese-dependent peroxidase; Karyotyping;
Laccase Gene regulation (Reddy, C.A. (13) 137)
Lignin; White-rot fungi; Lignin peroxidase; Manganese perox-
idase; Enzyme regulation (Hatakka, A. (13) 125)
Lignin peroxidase redox cycle
Involvement of carbohydrate residues; Veratryl alcohol as a
Biopulping; Lignin biodegradation; Pleurotus eryngii; Phane-
mediator; Marcus theory; Long-range electron transfer
rochaete chrysosporium; Wheat straw; Aryl-alcohol oxidase;
(Schoemaker, H.E. (13) 321)
Ultrastructure (Martinez, A.T. (13) 265)
Lignocellulose
Cellobiose:quinone oxidoreductase; Cellobiose oxidase; Cel-
Phanerochaete chrysosporium; Lignin; Cellobiohydrolase; BU
lobiose dehydrogenase; Lignin degradation; Cellulose degra-
— 3)-glucanase; Xylanolytic system; Transformation (Broda,
dation; Fenton’s reagent; Hydroxyl radical; Peroxidases
P. (13) 189)
(Ander, P. (13) 297)
Bleaching; Delignification; Manganese peroxidase; Trametes Lignocellulose degradation
(Reid, I.D. (13) 369) Hydrogen peroxide; Oxalate; White-rot fungi; Brown-rot fungi
(Evans, C.S. (13) 235)
Light harvesting
Prochlorophytes; Chlorophyll a/b antenna; Thylakoid orga-
Cellobiose dehydrogenase; Fenton reaction; Hydroxyl radi-
nization; Phylogeny; Ecological physiology (Post, A.F. (13)
cals; Phanerochaete chrysosporium (Wood, P.M. (13) 313)
393)
Lignocellulose oxidation
Lignin
Hydroxyl radical; Fenton’s reagent; Manganese III complex;
White-rot fungi; Lignin peroxidase; Manganese peroxidase;
Electron microscopy (Joseleau, J.-P. (13) 255)
Laccase; Enzyme regulation (Hatakka, A. (13) 125)
Phanerochaete chrysosporium; Lignocellulose; Cellobiohydro- Lignocellulosic material
lase; B(1 — 3)-glucanase; Xylanolytic system; Transformation Aspergillus spp.; Xylanases; Biopulping; Biobleaching; Indus-
(Broda, P. (13) 189) trial waste water treatment (Duarte, J.C. (13) 377)
Lignin biodegradation
Long-range electron transfer
Biopulping; Pleurotus eryngii; Phanerochaete chrysosporium;
Lignin peroxidase redox cycle; Involvement of carbohydrate
Wheat straw; Aryl-alcohol oxidase; Laccase; Ultrastructure
residues; Veratryl alcohol as a mediator; Marcus theory
(Martinez, A.T. (13) 265)
(Schoemaker, H.E. (13) 321)
Lignin degradation
Manganese-dependent peroxidase
Veratryl alcohol; Phanerochaete chrysosporium; Basid-
Lignin peroxidase genes; White-rot fungi; Phanerochaete
iomycete; Chlorinated aromatics; Mediator (De Jong, E. (13)
chrysosporium; Fungal transformation; Karyotyping; Gene
153)
regulation (Reddy, C.A. (13) 137)
Cellobiose.quinone oxidoreductase; Cellobiose oxidase; Cel-
lobiose dehydrogenase; Cellulose degradation; Fenton’s Manganese III complex
reagent; Hydroxyl radical; Peroxidases; Laccase (Ander, P. Hydroxyl radical; Fenton’s reagent; Lignocellulose oxidation;
(13) 297) Electron microscopy (Joseleau, J.-P. (13) 255)
Biopulping; White rot fungi; Ultrastructure; Ceriporiopsis sub-
Manganese peroxidase
vermispora; Phanerochaete chrysosporium (Messner, K. (13)
Lignin; White-rot fungi; Lignin peroxidase; Laccase; Enzyme
351)
regulation (Hatakka, A. (13) 125)
Lignin peroxidase
Oxalic acid; Veratryl alcohol; Lignin peroxidase; Oxaloac-
Lignin; White-rot fungi; Manganese peroxidase; Laccase; En-
etase; Glyoxylate oxidase; Wood-rotting basidiomycetes
zyme regulation (Hatakka, A. (13) 125)
(Shimada, M. (13) 285)
Oxalic acid; Veratryl alcohol; Manganese peroxidase; Oxalo-
acetase; Glyoxylate oxidase; Wood-rotting basidiomycetes Bleaching; Delignification; Laccase; Trametes (Reid, I.D. (13)
(Shimada, M. (13) 285) 369)
477
Marcus theory Peroxidases
Lignin peroxidase redox cycle; Involvement of carbohydrate Cellobiose:quinone oxidoreductase; Cellobiose oxidase; Cel-
residues; Veratryl alcohol as a mediator; Long-range electron lobiose dehydrogenase; Lignin degradation; Cellulose degra-
transfer (Schoemaker, H.E. (13) 321) dation; Fenton’s reagent; Hydroxyl radical; Laccase (Ander,
P. (13) 297)
Mechanism
Clostridium difficile; Toxin A; Toxin B; Receptor (Wolfhagen, Peroxidasic degradation of lignin
M.J.H.M. (13) 59) Molecular structure of lignin; Condensed and non-condensed
units; Ester and ether linked phenolic acids; Peroxidase;
Mediator Horseradish peroxidase; Phanerochaete chrysosporium (Mon-
Veratryl alcohol; Lignin degradation; Phanerochaete chryso- ties, B. (13) 277)
sporium; Basidiomycete; Chlorinated aromatics (De Jong, E.
(13) 153)
Phanerochaete chrysosporium
Lignin peroxidase genes; White-rot fungi; Fungal transforma-
Membrane proteins
tion; Manganese-dependent peroxidase; Karyotyping; Gene
Penicillin-binding proteins; Escherichia coli; Anchoring mech-
regulation (Reddy, C.A. (13) 137)
anisms (Gittins, J.R. (13) 1)
Veratryl alcohol; Lignin degradation; Basidiomycete; Chlori-
Molecular biology
nated aromatics; Mediator (De Jong, E. (13) 153)
Rickettsiae; Taxonomy (Drancourt, M. (13) 13)
Lignocellulose; Lignin; Cellobiohydrolase; B(1 > 3)-glucanase;
Molecular structure of lignin
Xylanolytic system; Transformation (Broda, P. (13) 189)
Condensed and non-condensed units; Ester and ether linked
phenolic acids; Peroxidasic degradation of lignin; Peroxidase;
Horseradish peroxidase; Phanerochaete chrysosporium (Mon- Biopulping; Lignin biodegradation; Pleurotus eryngii; Wheat
ties, B. (13) 277) straw; Aryl-alcohol oxidase; Laccase; Ultrastructure (Martinez,
A.T. (13) 265)
Multidomain proteins
Cellulose; Cellulolytic microorganisms; Cellulases; Cellulo- Molecular structure of lignin; Condensed and non-condensed
some (Béguin, P. (13) 25) units; Ester and ether linked phenolic acids; Peroxidasic
degradation of lignin; Peroxidase; Horseradish peroxidase
N, fixation (Monties, B. (13) 277)
Denitrification; H, oxidation; Pseudomonas species; Rhizo-
sphere; Taxonomy (Chan, Y.-K. (13) 95) Cellobiose dehydrogenase; Fenton reaction; Hydroxyl radi-
cals; Lignocellulose breakdown (Wood, P.M. (13) 313)
Oxalate
Lignocellulose degradation; Hydrogen peroxide; White-rot
Biopulping; White rot fungi; Lignin degradation; Ultrastruc-
fungi; Brown-rot fungi (Evans, C.S. (13) 235)
ture; Ceriporiopsis subvermispora (Messner, K. (13) 351)
Oxalic acid
Phylogeny
Veratryl alcohol; Lignin peroxidase; Manganese peroxidase;
Prochlorophytes; Chlorophyll a/b antenna; Light harvesting;
Oxaloacetase; Glyoxylate oxidase; Wood-rotting basidio-
Thylakoid organization; Ecological physiology (Post, A.F. (13)
mycetes (Shimada, M. (13) 285)
393)
Oxaloacetase
Pleurotus eryngii
Oxalic acid; Veratryl alcohol; Lignin peroxidase; Manganese
Biopulping; Lignin biodegradation; Phanerochaete chrysospo-
peroxidase; Glyoxylate oxidase; Wood-rotting basidiomycetes
rium; Wheat straw; Aryl-alcohol oxidase; Laccase; Ultrastruc-
(Shimada, M. (13) 285)
ture (Martinez, A.T. (13) 265)
Penicillin-binding proteins
Escherichia coli; Membrane proteins; Anchoring mechanisms Prochlorophytes
(Gittins, J.R. (13) 1) Chlorophyll a/b antenna; Light harvesting; Thylakoid orga-
nization; Phylogeny; Ecological physiology (Post, A.F. (13)
Peroxidase 393)
Molecular structure of lignin; Condensed and non-condensed
units; Ester and ether linked phenolic acids; Peroxidasic Pseudomonas species
degradation of lignin; Horseradish peroxidase; Phanerochaete Denitrification; H, oxidation; N, fixation; Rhizosphere; Tax-
chrysosporium (Monties, B. (13) 277) onomy (Chan, Y.-K. (13) 95)
478
Receptor Transformation
Clostridium difficile; Toxin A; Toxin B; Mechanism (Wolf- Phanerochaete chrysosporium; Lignocellulose; Lignin; Cello-
hagen, M.J.H.M. (13) 59) biohydrolase; B(1 — 3)-glucanase; Xylanolytic system (Broda,
P. (13) 189)
Rhizosphere
Denitrification; H, oxidation; N, fixation; Pseudomonas Transmission electron microscopy
species; Taxonomy (Chan, Y.-K. (13) 95) Scanning electron microscopy; Wood biodegradation; White
rot; Brown rot; Soft rot; Bacterial decay; EDXA; Immunogold
cytochemistry (Daniel, G. (13) 199)
Rhodopseudomonas palustris
Anaerobic metabolism; Aromatic compounds; Denitrifying
Transport
pseudomonads (Elder, D.J.E. (13) 441)
Amino acid secretion; Bioenergetics; Kinetics; Coryneform
bacteria; Transport mechanism (Kramer, R. (13) 75)
Rickettsiae
Taxonomy; Molecular biology (Drancourt, M. (13) 13)
Transport mechanism
Transport; Amino acid secretion; Bioenergetics; Kinetics;
Scanning electron microscopy Coryneform bacteria (Kramer, R. (13) 75)
Transmission electron microscopy; Wood biodegradation;
White rot; Brown rot; Soft rot; Bacterial decay; EDXA; Ultrastructural modification
Immunogold cytochemistry (Daniel, G. (13) 199) White-rot fungi; Enzymes; Cell wall (Ruel, K. (13) 241)
Soft rot Ultrastructure
Transmission electron microscopy; Scanning electron mi- Biopulping; Lignin biodegradation; Pleurotus eryngii; Phane-
croscopy; Wood biodegradation; White rot; Brown rot; Bacte- rochaete chrysosporium; Wheat straw; Aryl-alcohol oxidase;
rial decay; EDXA; Immunogold cytochemistry (Daniel, G. Laccase (Martinez, A.T. (13) 265)
(13) 199)
Biopulping; White rot fungi; Lignin degradation; Ceriporiopsis
subvermispora; Phanerochaete chrysosporium (Messner, K. (13)
Synergism
351)
Bacteroides sp.; Capsule; Abscess; Virulence; Anaerobic bac-
teria (Brook, I. (13) 65)
Veratry! alcohol
Lignin degradation; Phanerochaete chrysosporium; Basidio-
Taxonomy
mycete; Chlorinated aromatics; Mediator (De Jong, E. (13)
Rickettsiae; Molecular biology (Drancourt, M. (13) 13)
153)
Denitrification; H, oxidation; N, fixation; Pseudomonas Oxalic acid; Lignin peroxidase; Manganese peroxidase; Oxa-
species; Rhizosphere (Chan, Y.-K. (13) 95) loacetase; Glyoxylate oxidase; Wood-rotting basidiomycetes
(Shimada, M. (13) 285)
Temperature optimum
Bleaching; Hemicellulase; pH optimum; Xylanase (Lundgren, Veratryl alcohol as a mediator
K.R. (13) 365) Lignin peroxidase redox cycle; Involvement of carbohydrate
residues; Marcus theory; Long-range electron transfer
(Schoemaker, H.E. (13) 321)
Thylakoid organization
Prochlorophytes; Chlorophyll a/b antenna; Light harvesting;
Virulence
Phylogeny; Ecological physiology (Post, A.F. (13) 393)
Bacteroides sp.; Capsule; Abscess; Anaerobic bacteria; Syner-
gism (Brook, I. (13) 65)
Toxin A
Clostridium difficile; Toxin B; Mechanism; Receptor (Wolf-
Wheat straw
hagen, M.J.H.M. (13) 59)
Biopulping; Lignin biodegradation; Pleurotus eryngii; Phane-
rochaete chrysosporium; Aryl-alcohol oxidase; Laccase; Ultra-
Toxin B structure (Martinez, A.T. (13) 265)
Clostridium difficile; Toxin A; Mechanism; Receptor (Wolf-
hagen, M.J.H.M. (13) 59)
White rot
Transmission electron microscopy; Scanning electron micros-
Trametes copy; Wood biodegradation; Brown rot; Soft rot; Bacterial
Bleaching; Delignification; Laccase; Manganese peroxidase decay; EDXA; Immunogold cytochemistry (Daniel, G. (13)
(Reid, I.D. (13) 369) 199)
479
White-rot fungi Wood-rotting basidiomycetes
Lignin; Lignin peroxidase; Manganese peroxidase; Laccase; Oxalic acid; Veratryl alcohol; Lignin peroxidase; Manganese
Enzyme regulation (Hatakka, A. (13) 125) peroxidase; Oxaloacetase; Glyoxylate oxidase (Shimada, M.
(13) 285)
Lignin peroxidase genes; Phanerochaete chrysosporium; Fun-
gal transformation; Manganese-dependent peroxidase; Kary-
Xylanase
otyping; Gene regulation (Reddy, C.A. (13) 137)
Bleaching; Kraft pulp (Viikari, L. (13) 335)
Lignocellulose degradation; Hydrogen peroxide; Oxalate;
Brown-rot fungi (Evans, C.S. (13) 235) Bleaching; Hemicellulase; pH optimum; Temperature opti-
mum (Lundgren, K.R. (13) 365)
Enzymes; Ultrastructural modification; Cell wall (Ruel, K.
(13) 241) Aspergillus spp.; Lignocellulosic material; Biopulping; Bio-
bleaching; Industrial waste water treatment (Duarte, J.C. (13)
Biopulping; Lignin degradation; Ultrastructure; Ceriporiopsis
377)
subvermispora; Phanerochaete chrysosporium (Messner, K. (13)
351)
Xylanolytic system
Phanerochaete chrysosporium; Lignocellulose; Lignin; Cel-
Wood biodegradation
Transmission electron microscopy; Scanning electron mi- lobiohydrolase; B(1 > 3)-glucanase; Transformation (Broda,
croscopy; White rot; Brown rot; Soft rot; Bacterial decay; P. (13) 189)
EDXA; Immunogold cytochemistry (Daniel, G. (13) 199)